121 research outputs found

    Transport Properties of Shale Gas in Relation to Kerogen Porosity

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    Kerogen is a micro-porous amorphous solid, which consist the major component of the organic matter scattered in the potentially lucrative shale formations hosting shale gas. Deeper understanding of the way kerogen porosity characteristics affect the transport properties of hosted gas is important for the optimal design of the extraction process. In this work, we employ molecular simulation techniques in order to investigate the role of porosity on the adsorption and transport behavior of shale gas in overmature type II kerogen found at many currently productive shales. To account for the wide range of porosity characteristics present in the real system, a large set of 60 kerogen structures that exhibit a diverse set of void space attributes was used. Grand Canonical Monte Carlo (GCMC) simulations were performed for the study of the adsorption of CH4, C2H6, n-C4H10 and CO2 at 298.15 K and 398.15 K and a variety of 2 pressures. The amount adsorbed is found to correlate linearly with the porosity of the kerogen. Furthermore, the adsorption of a quaternary mixture of CH4, C2H6, CO2 and N2 was investigated in the same conditions, indicating that the composition resembling that of the shale gas is achieved under higher temperature and pressure values, i.e. conditions closer to these prevailing in the hosting shale field. The diffusion of CH4, C2H6 and CO2, both as pure components and as components of the quaternary mixture, was investigated using equilibrium Molecular Dynamics (MD) simulations at temperatures of 298.15 and 398.15 K and pressures of 1 and 250 atm. In addition to the effect of temperature and pressure, the importance of limiting pore diameter (LPD), maximum pore diameter (MPD), accessible volume (Vacc) and accessible surface (Sacc) on the observed adsorbed amount and diffusion coefficient was revealed by qualitative relationships. The diffusion across the models was found to be anisotropic and the maximum component of the diffusion coefficient to correlate linearly with LPD, indicating that the controlling step of the transport process is the crossing of the limiting pore region. Finally, the transport behavior of the pure compounds was compared with their transport properties when in mixture and it was found that the diffusion coefficient of each compound in the mixture is similar to the corresponding one in pure. This observation agrees with earlier studies in different kerogen models comprising wider pores that have revealed negligible cross-correlation Onsager coefficients

    1-Octanol/water partition coefficients of n-alkanes from molecular simulations of absolute solvation free energies

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    The 1-octanol/water partition coefficient is an important thermodynamic variable usually employed to understand and quantify the partitioning of solutes between aqueous and organic phases. It finds widespread use in many empirical correlations to evaluate the environmental fate of pollutants as well as in the design of pharmaceuticals. The experimental evaluation of 1-octanol/water partition coefficients is an expensive and time-consuming procedure, and thus, theoretical estimation methods are needed, particularly when a physical sample of the solute may not yet be available, such as in pharmaceutical screening. 1-Octanol/water partition coefficients can be obtained from Gibbs free energies of solvation of the solute in both the aqueous and the octanol phases. The accurate evaluation of free energy differences remains today a challenging problem in computational chemistry. In order to study the absolute solvation Gibbs free energies in 1-octanol, a solvent that can mimic many properties of important biological systems, free energy calculations for n-alkanes in the range C-1-C-8 were performed using molecular simulation techniques, following the thermodynamic integration approach. In the first part of this paper, we test different force fields by evaluating their performance in reproducing pure 1-octanol properties. It is concluded that all-atom force fields can provide good accuracy but at the cost of a higher computational time compared to that of the united-atom force fields. Recent versions of united-atom force fields, such as Gromos and TraPPE, provide satisfactory results and are, thus, useful alternatives to the more expensive all-atom models. In the second part of the paper, the Gibbs free energy of solvation in 1-octanol is calculated for several n-alkanes using three force fields to describe the solutes, namely Gromos, TraPPE, and OPLS-AA. Generally, the results obtained are in excellent agreement with the available experimental data and are of similar accuracy to commonly used QSPR models. Moreover, we have estimated the Gibbs free energy of hydration for the different compounds with the three force fields, reaching average deviations from experimental data of less than 0.2 kcal/mol for the case of the Gromos force field. Finally, we systematically compare different strategies to obtain the 1-octanol/water partition coefficient from the simulations. It is shown that a fully predictive method combining the Gromos force field in the aqueous phase and the OPLS-AA/TraPPE force field for the organic phase can give excellent predictions for n-alkanes up to C-8 with an absolute average deviation of 0.1 log P units to the experimental data

    Predicting hydration Gibbs energies of alkyl-aromatics using molecular simulation : a comparison of current force fields and the development of a new parameter set for accurate solvation data

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    The Gibbs energy of hydration is an important quantity to understand the molecular behavior in aqueous systems at constant temperature and pressure. In this work we review the performance of some popular force fields, namely TraPPE, OPLS-AA and Gromos, in reproducing the experimental Gibbs energies of hydration of several alkyl-aromatic compounds-benzene, mono-, di- and tri-substituted alkylbenzenes-using molecular simulation techniques. In the second part of the paper, we report a new model that is able to improve such hydration energy predictions, based on Lennard Jones parameters from the recent TraPPE-EH force field and atomic partial charges obtained from natural population analysis of density functional theory calculations. We apply a scaling factor determined by fitting the experimental hydration energy of only two solutes, and then present a simple rule to generate atomic partial charges for different substituted alkyl-aromatics. This rule has the added advantages of eliminating the unnecessary assumption of fixed charge on every substituted carbon atom and providing a simple guideline for extrapolating the charge assignment to any multi-substituted alkyl-aromatic molecule. The point charges derived here yield excellent predictions of experimental Gibbs energies of hydration, with an overall absolute average deviation of less than 0.6 kJ mol(-1). This new parameter set can also give good predictive performance for other thermodynamic properties and liquid structural information

    Modeling of bulk kerogen porosity: Methods for control and characterization

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    Shale gas is an unconventional source of energy, which has attracted a lot of attention during the last years. Kerogen is a prime constituent of shale formations and plays a crucial role in shale gas technology. Significant experimental effort in the study of shales and kerogen has produced a broad diversity of experimentally determined structural and thermodynamic properties even for samples of the same well. Moreover, proposed methods reported in the literature for constructing realistic bulk kerogen configurations have not been thoroughly investigated. One of the most important characteristics of kerogens is their porosity, due to its direct connection with their transport properties and its potential as discriminating and classifying metric between samples. In this study, molecular dynamics (MD) simulations are used to study the porosity of model kerogens. The porosity is controlled effectively with systematic variations of the number and the size of dummy LJ particles that are used during the construction of system’s configuration. The porosity of each sample is characterized with a newly proposed algorithm for analyzing the free space of amorphous materials. It is found that, with moderately sized configurations, it is possible to construct percolated pores of interest in the shale gas industry

    Transport Properties of Shale Gas in Relation to Kerogen Porosity

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    Kerogen is a micro-porous amorphous solid, which consist the major component of the organic matter scattered in the potentially lucrative shale formations hosting shale gas. Deeper understanding of the way kerogen porosity characteristics affect the transport properties of hosted gas is important for the optimal design of the extraction process. In this work, we employ molecular simulation techniques in order to investigate the role of porosity on the adsorption and transport behavior of shale gas in overmature type II kerogen found at many currently productive shales. To account for the wide range of porosity characteristics present in the real system, a large set of 60 kerogen structures that exhibit a diverse set of void space attributes was used. Grand Canonical Monte Carlo (GCMC) simulations were performed for the study of the adsorption of CH4, C2H6, n-C4H10 and CO2 at 298.15 K and 398.15 K and a variety of 2 pressures. The amount adsorbed is found to correlate linearly with the porosity of the kerogen. Furthermore, the adsorption of a quaternary mixture of CH4, C2H6, CO2 and N2 was investigated in the same conditions, indicating that the composition resembling that of the shale gas is achieved under higher temperature and pressure values, i.e. conditions closer to these prevailing in the hosting shale field. The diffusion of CH4, C2H6 and CO2, both as pure components and as components of the quaternary mixture, was investigated using equilibrium Molecular Dynamics (MD) simulations at temperatures of 298.15 and 398.15 K and pressures of 1 and 250 atm. In addition to the effect of temperature and pressure, the importance of limiting pore diameter (LPD), maximum pore diameter (MPD), accessible volume (Vacc) and accessible surface (Sacc) on the observed adsorbed amount and diffusion coefficient was revealed by qualitative relationships. The diffusion across the models was found to be anisotropic and the maximum component of the diffusion coefficient to correlate linearly with LPD, indicating that the controlling step of the transport process is the crossing of the limiting pore region. Finally, the transport behavior of the pure compounds was compared with their transport properties when in mixture and it was found that the diffusion coefficient of each compound in the mixture is similar to the corresponding one in pure. This observation agrees with earlier studies in different kerogen models comprising wider pores that have revealed negligible cross-correlation Onsager coefficients

    Thermodynamic interpolation for the simulation of two-phase flow of non-ideal mixtures

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    This paper describes the development and application of a technique for the rapid interpolation of thermodynamic properties of mixtures for the purposes of simulating two-phase flow. The technique is based on adaptive inverse interpolation and can be applied to any Equation of State and multicomponent mixture. Following analysis of its accuracy, the method is coupled with a two-phase flow model, based on the homogeneous equilibrium mixture assumption, and applied to the simulation of flows of carbon dioxide (CO2) rich mixtures. This coupled flow model is used to simulate the experimental decompression of binary and quinternary mixtures. It is found that the predictions are in good agreement with the experimental data and that the interpolation approach provides a flexible, robust means of obtaining thermodynamic properties for use in flow models

    Using molecular simulation to predict solute solvation and partition coefficients in solvents of different polarity

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    A methodology is proposed for the prediction of the Gibbs energy of solvation (Delta(Solv)G) based on MD simulations. The methodology is then used to predict DSolvG of four solutes (namely propane, benzene, ethanol and acetone) in several solvents of different polarities (including n-hexane, n-hexadecane, ethylbenzene, 1-octanol, acetone and water) while testing the validity of the TraPPE force field parameters. Excellent agreement with experimental data is obtained, with average deviations of 0.2, 1.1, 0.8 and 1.2 kJ mol(-1), for the four solutes respectively. Subsequently, partition coefficients (log P) for forty different solute/solvent systems are predicted. The a priori knowledge of partition coefficient values is of high importance in chemical and pharmaceutical separation process design or as a measure of the increasingly important environmental fate. Here again, the agreement between experimental data and simulation predictions is excellent, with an absolute average deviation of 0.28 log P units. However, this deviation can be decreased down to 0.14 log P units, just by optimizing partial atomic charges of acetone in the water phase. Consequently, molecular simulation is proven to be a tool with strong physical basis able to predict log P with competitive accuracy when compared to the popular statistical methods with weak physical basis

    Faculty Gathering & Lunch

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    Faculty Gathering & Lunch

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