109 research outputs found

    Gloger’s ecogeographical rule and colour variation among Willow Tits Parus montanus

    Get PDF
    The Willow Tit Parus montanus is distributed across the Palaearctic and into the Oriental zoogeographical region with 15 subspecies. P. m. borealis is the only subspecies in Fennoscandia. Based on 86 skinned museum specimens from Norway (south of 64 oN), we found relatively large variations in the colours of the mantle, the underpart and the cheeks. Birds along the coast are significantly darker and have less white on their cheeks than inland birds. Furthermore, the birds become paler on their mantle, underparts and cheeks towards north and east, and in particular the annual precipitation explains a significant part of the colour variation. This is in accordance with Gloger's climatic rule that points out that feathers tend to be darkly coloured in habitats where relative humidity is high and pale where it is low

    Modelling Capercaillie (Tetrao urogallus) lek sites distribution and their limiting factors in a central Norwegian managed forest landscape

    Get PDF
    Forest management has substantially altered Fennoscandian forests through clear-cutting practices started during the 1950s. Impacts on the natural biodiversity in mature boreal forest have been inevitable. The Capercaillie (Tetrao urogallus) is often regarded as an indicator species for natural old growth forest, displaying on traditional lek sites during spring. In a heterogeneous forest landscape of two adjoining municipalities in central Norway we studied whether forest management or other environmental factors can have influenced the lek distribution. We identified 15 active leks and 12 recently abandoned leks. The maximum entropy distribution modelling (MaxEnt) was used to investigate factors associated with lek distribution at two different scales, where the scale reflecting the lek site areas gave the most adequate result. Active leks were predominantly associated with mature stands of forest. In 65% of the study area the habitat suitability for lekking was most influenced by forest management. Furthermore, the recently abandoned leks were found less frequently in low productive and mature forests than the still active ones, implying that previous leks in productive forest stands may have been lost through logging. Based on our data we have developed models for the predicted distribution and the current limiting factors, showing that altered forest management could improve lek site suitability in large parts of this boreal forest

    \u3ci\u3eWallinia chavarriae\u3c/i\u3e n. sp. (Trematoda: Macroderoididae) in \u3ci\u3eAstyanax aeneus\u3c/i\u3e (GĂŒnther, 1860) and \u3ci\u3eBryconamericus scleroparius\u3c/i\u3e (Regan, 1908) (Osteichthyes: Characidae) from the Área de ConservaciĂłn Guanacaste, Costa Rica

    Get PDF
    Wallinia chavarriae n. sp. is described from the small-bodied characids Astyanax aeneus and Bryconamericus scleroparius in the Área de Conservación Guanacaste, northwestern Costa Rica. The species differs from W. valenciae in possessing an acetabulum that is smaller than the oral sucker and vitelline follicles that are ovoid or rounded rather than elongate and tubular. Detailed comparison between these two species is handicapped by the less than satisfactory condition of the type and only museum specimen of W. valenciae. Wallinia chavarriae and W. valenciae belong to a subfamily of trematodes, Walliniinae, that arguably includes Creptotrematina spp., Magnivitellum simplex, and possibly Margotrema. The morphology of walliniines suggests that they are macroderoidids, but a clearer understanding of their classification could be gained from their larval morphology or from molecular systematic studies. The host associations of a monophyletic Walliniinae would indicate diversification within two groups of freshwater fishes: the neotropical characids for species of Wallinia, Creptotrematina, and Magnivitellum and the endemic central Mexican goodeids for those of Margotrema. The biogeography and host associations of these parasites provide a system for studies of potential host switching and vicariance, involving the middle-American and neotropical regions

    Molecular evolution of the Leptosphaeria maculans avirulence gene AvrLm4-7 under selection pressure and its implication in the AvrLm3/Rlm3 recognition

    Get PDF
    Leptosphaeria maculans, agent de la nĂ©crose du collet des crucifĂšres, est un agent pathogĂšne majeur du colza (Brassica napus). La lutte gĂ©nĂ©tique est aujourd’hui le procĂ©dĂ© le plus utilisĂ© afin de protĂ©ger les cultures des attaques de ce champignon. Cette mĂ©thode se base principalement sur l’utilisation de cultivars possĂ©dant des gĂšnes de rĂ©sistance spĂ©cifique (Rlm) qui permettent le dĂ©clenchement des rĂ©actions de dĂ©fense de la plante parla reconnaissance directe ou indirecte des produits des gĂšnes d’avirulence correspondants (AvrLm) prĂ©sents dans la population pathogĂšne. Plusieurs de ces rĂ©sistances ont dĂ©jĂ  Ă©tĂ© massivement dĂ©ployĂ©es en France et dans le monde, connaissant dans un premier temps un fort succĂšs commercial grĂące Ă  la protection fournie, suivie d’une perte d’efficacitĂ© trĂšs rapide. Avant cette thĂšse, le nombre d’études au champ des processus impliquĂ©s dans le contournement d’un gĂšne de rĂ©sistance Ă©tait trĂšs limitĂ©, en particulier chez les champignons. L’objectif de cette thĂšse Ă©tait d'Ă©tudier l’évolution molĂ©culaire du gĂšne d’avirulence AvrLm4-7sous pression de sĂ©lection, en profitant de son clonage et de la commercialisation rĂ©cente de cultivars Rlm7, afin d’obtenir une Ă©tude prĂ©coce et dĂ©taillĂ©e des mĂ©canismes molĂ©culaires Ă  l’origine du contournement d’une rĂ©sistance spĂ©cifique. Le gĂšne AvrLm4-7 prĂ©sente l’originalitĂ© de coder pour une protĂ©ine responsable d’une double spĂ©cificitĂ© d’interaction vis-Ă -vis des gĂšnes Rlm4 et Rlm7. Dans un premier temps, j’ai pu valider par mutagenĂšse dirigĂ©e le rĂŽle primordial de l’acide aminĂ© 120 dont la mutation affecte la reconnaissance d’AvrLm4 par Rlm4 sans toutefois altĂ©rer la reconnaissance d’AvrLm7 par Rlm7.Le contournement de la rĂ©sistance Rlm7 a Ă©tĂ© ensuite analysĂ© Ă  l’aide d’une importante collection de souches prĂ©levĂ©e sur deux sites expĂ©rimentaux indĂ©pendants (Grignon ; Versailles) sur une pĂ©riode de trois ans. Sur le premier site Ă©tait cultivĂ©e une variĂ©tĂ© Rlm7 en monoculture avec un travail du sol simplifiĂ© tandis que sur le second site, le mode de culture incluait rotation culturale et enfouissement par labour des rĂ©sidus de cultures. Il a ensuite Ă©tĂ© montrĂ© que, au contraire de la reconnaissance AvrLm4/Rlm4, un grand nombre d’évĂšnements de mutation peuvent ĂȘtre Ă  l’origine de la virulence d’une souche vis-Ă -vis de Rlm7. L’analyse molĂ©culaire des souches virulentes et avirulentes de cette collection a ainsi permis de rĂ©pertorier sept catĂ©gories d’évĂšnements de mutation. La grande majoritĂ© des cas concerne la dĂ©lĂ©tion d’AvrLm4-7 mais des mutations dues au RIP et plusieurs autres Ă©vĂšnements de mutation provoquant l’introduction prĂ©maturĂ©e de codons stop dans la sĂ©quence codante du gĂšne sont aussi observĂ©s. La majoritĂ© de ces Ă©vĂšnements de mutation sont liĂ©s Ă  la reproduction sexuĂ©e du champignon et ont lieu au sein mĂȘme de la parcelle d’étude. Le phĂ©notypage de cette collection a par ailleurs rĂ©vĂ©lĂ© un fort contraste entre les deux sites expĂ©rimentaux, dĂ©montrant ainsi l’importance des pratiques culturales dans le maintien de l’efficacitĂ© de la rĂ©sistance Rlm7 dans le temps. En effet, aprĂšs trois annĂ©es de culture de cultivars Rlm7, la frĂ©quence des souches virulentes a7 dans les populations du site de Versailles reste infĂ©rieure Ă  1 % contre environ 30 % sur le site de Grignon. Finalement, le phĂ©notypage de la collection de souches a Ă©galement montrĂ© que le contournement de Rlm7 s’accompagnait dans plus de 98% des souches de la rĂ©surgence de l’avirulence AvrLm3. Par l’étude de cette collection et par croisements gĂ©nĂ©tiques, j’ai pu montrer que AvrLm3 n’était pas un nouvel allĂšle d’avrLm4-7 mais un second gĂšne situĂ© en rĂ©gion tĂ©lomĂ©rique Ă  19.3 cM d’AvrLm4-7. J’ai Ă©galement dĂ©montrĂ© une interaction fonctionnelle antagoniste entre AvrLm4-7 et AvrLm3 qui empĂȘche la reconnaissance Rlm3 /AvrLm3 en prĂ©sence d’AvrLm4-7 et explique la restauration de l’avirulence AvrLm3 lors de la perte de l’avirulence AvrLm7.Par une association originale de biologie molĂ©culaire, de gĂ©nĂ©tique des populations et d’agronomie, j’ai ainsi pu apporter une nouvelle illustration Ă  la course aux armements entre un agent pathogĂšne et sa plante hĂŽte, les gĂšnes AvrLm3 et AvrLm4-7 utilisant deux stratĂ©gies distinctes afin d’échapper Ă  la reconnaissance de leurs gĂšnes de rĂ©sistance spĂ©cifiques.Leptosphaeria maculans is a filamentous ascomycete causing stem canker of oilseed rape (Brassica napus). This disease is often controlled by the use of B. napus cultivars harbouring major resistance genes (Rlm). Direct or indirect recognition of the corresponding avirulence protein (AvrLm) in the pathogen triggers plant defence reactions. Several resistances have been massively deployed in France and worldwide, they initially showed commercial success due to the protection provided and in a second time, a very fast decrease of efficiency (resistance breakdown).Prior to this thesis, field studies of resistance gene breakdown mechanisms were rare, especially for fungi. The purpose of this PhD thesis was to study the molecular evolution of the avirulence gene AvrLm4-7 under selection pressure, by exploiting our knowledge of the gene, and the recent release of Rlm7 cultivars, to obtain an early and detailed study of the molecular mechanisms involved in a resistance gene breakdown. AvrLm4-7 induces resistance responses in plant harbouring either Rlm4 or Rlm7 and I validated by targeted point mutagenesis the central role of the amino acid 120 in the avrLm4-7-Rlm4 interaction. Its mutation prevents AvrLm4-7 recognition by Rlm4 without affecting avrLm4-7-Rlm7 recognition.Loss of avirulence towards Rlm7 was then studied by the analysis of an important isolate collection originating from two independent French experimental fields (Grignon; Versailles) over three years. In the first field was cropped Rlm7 cultivars in monoculture with low tillage agronomical practices whereas crop rotation and ploughing were done in the second field. In contrast to AvrLm4-Rlm4 evolution, a great number of mutations were found to explain the “gain” of virulence towards Rlm7. Seven mutational event categories were found. The great majority of these categories involve AvrLm4-7 deletion but mutation due to RIP and several other mutational events causing premature apparition of stop codons in the coding sequence of the gene were observed too. The majority of these events are linked to the sexual reproduction of the fungus and occurs in the experimental field.In addition, our work showed the importance of the cultural practices in preserving Rlm7 efficacy. Indeed, after three years using Rlm7 cultivars, a7 frequency was below 1% whereas representing around 30% of the isolates observed in Grignon.Finally, phenotyping of the isolate collection also showed the resurgence of an A3 phenotype linked with the loss of AvrLm7 avirulence in more than 98% of the isolates. Genetic analysis and collection phenotyping showed that AvrLm3 is not a new AvrLm4-7 allele but a distinct gene located in a telomeric region at 19.3 cM of AvrLm4-7. I also demonstrated that an antagonistic interaction between AvrLm4-7 and AvrLm3 exists: the presence of Avrlm4-7 prevents Rlm3 to detect AvrLm3 and explains the surge of the AvrLm3 avirulence along with the loss of the AvrLm7 avirulence.By an original association of molecular biology, population genetic and agronomy, this work provided a new illustration of the plant-pathogen arms race, AvrLm3 and AvrLm4-7 using two different strategies to escape their respective resistance genes

    De piĂšces et de morceaux . Les Blasons domestiques de Gilles Corrozet

    No full text
    Corrozet's "Blasons domestiques" proves among other things that the didactic genre belongs to the « poetics » as well as the lyric genre. In its inventory of the different parts of the house, the book uses a method of description combining fragmentation and accumulation, a device borrow from the heraldy of love, and a fantasmatic expression of an impossible to satisfy desire to possess, and it demonstrates that literature, whatever it may claim as its object, isfondamentaly the expression of a lack.Daverdin-Liaroutzos Chantal. De piÚces et de morceaux . Les Blasons domestiques de Gilles Corrozet. In: Littérature, n°78, 1990. Anatomie de l'emblÚme. pp. 46-53

    Evolution moleculaire sous pression de selection et implication dans la reconnaissance avrlm3/rlm3 du gene d'avirulence avrlm4-7 chez leptosphaeria maculans

    No full text
    Leptosphaeria maculans is a filamentous ascomycete causing stem canker of oilseed rape (Brassica napus). This disease is often controlled by the use of B. napus cultivars harbouring major resistance genes (Rlm). Direct or indirect recognition of the corresponding avirulence protein (AvrLm) in the pathogen triggers plant defence reactions. Several resistances have been massively deployed in France and worldwide, they initially showed commercial success due to the protection provided and in a second time, a very fast decrease of efficiency (resistance breakdown).Prior to this thesis, field studies of resistance gene breakdown mechanisms were rare, especially for fungi. The purpose of this PhD thesis was to study the molecular evolution of the avirulence gene AvrLm4-7 under selection pressure, by exploiting our knowledge of the gene, and the recent release of Rlm7 cultivars, to obtain an early and detailed study of the molecular mechanisms involved in a resistance gene breakdown. AvrLm4-7 induces resistance responses in plant harbouring either Rlm4 or Rlm7 and I validated by targeted point mutagenesis the central role of the amino acid 120 in the avrLm4-7-Rlm4 interaction. Its mutation prevents AvrLm4-7 recognition by Rlm4 without affecting avrLm4-7-Rlm7 recognition.Loss of avirulence towards Rlm7 was then studied by the analysis of an important isolate collection originating from two independent French experimental fields (Grignon; Versailles) over three years. In the first field was cropped Rlm7 cultivars in monoculture with low tillage agronomical practices whereas crop rotation and ploughing were done in the second field. In contrast to AvrLm4-Rlm4 evolution, a great number of mutations were found to explain the “gain” of virulence towards Rlm7. Seven mutational event categories were found. The great majority of these categories involve AvrLm4-7 deletion but mutation due to RIP and several other mutational events causing premature apparition of stop codons in the coding sequence of the gene were observed too. The majority of these events are linked to the sexual reproduction of the fungus and occurs in the experimental field.In addition, our work showed the importance of the cultural practices in preserving Rlm7 efficacy. Indeed, after three years using Rlm7 cultivars, a7 frequency was below 1% whereas representing around 30% of the isolates observed in Grignon.Finally, phenotyping of the isolate collection also showed the resurgence of an A3 phenotype linked with the loss of AvrLm7 avirulence in more than 98% of the isolates. Genetic analysis and collection phenotyping showed that AvrLm3 is not a new AvrLm4-7 allele but a distinct gene located in a telomeric region at 19.3 cM of AvrLm4-7. I also demonstrated that an antagonistic interaction between AvrLm4-7 and AvrLm3 exists: the presence of Avrlm4-7 prevents Rlm3 to detect AvrLm3 and explains the surge of the AvrLm3 avirulence along with the loss of the AvrLm7 avirulence.By an original association of molecular biology, population genetic and agronomy, this work provided a new illustration of the plant-pathogen arms race, AvrLm3 and AvrLm4-7 using two different strategies to escape their respective resistance genes.Leptosphaeria maculans, agent de la nĂ©crose du collet des crucifĂšres, est un agent pathogĂšne majeur du colza (Brassica napus). La lutte gĂ©nĂ©tique est aujourd’hui le procĂ©dĂ© le plus utilisĂ© afin de protĂ©ger les cultures des attaques de ce champignon. Cette mĂ©thode se base principalement sur l’utilisation de cultivars possĂ©dant des gĂšnes de rĂ©sistance spĂ©cifique (Rlm) qui permettent le dĂ©clenchement des rĂ©actions de dĂ©fense de la plante parla reconnaissance directe ou indirecte des produits des gĂšnes d’avirulence correspondants (AvrLm) prĂ©sents dans la population pathogĂšne. Plusieurs de ces rĂ©sistances ont dĂ©jĂ  Ă©tĂ© massivement dĂ©ployĂ©es en France et dans le monde, connaissant dans un premier temps un fort succĂšs commercial grĂące Ă  la protection fournie, suivie d’une perte d’efficacitĂ© trĂšs rapide. Avant cette thĂšse, le nombre d’études au champ des processus impliquĂ©s dans le contournement d’un gĂšne de rĂ©sistance Ă©tait trĂšs limitĂ©, en particulier chez les champignons. L’objectif de cette thĂšse Ă©tait d'Ă©tudier l’évolution molĂ©culaire du gĂšne d’avirulence AvrLm4-7sous pression de sĂ©lection, en profitant de son clonage et de la commercialisation rĂ©cente de cultivars Rlm7, afin d’obtenir une Ă©tude prĂ©coce et dĂ©taillĂ©e des mĂ©canismes molĂ©culaires Ă  l’origine du contournement d’une rĂ©sistance spĂ©cifique. Le gĂšne AvrLm4-7 prĂ©sente l’originalitĂ© de coder pour une protĂ©ine responsable d’une double spĂ©cificitĂ© d’interaction vis-Ă -vis des gĂšnes Rlm4 et Rlm7. Dans un premier temps, j’ai pu valider par mutagenĂšse dirigĂ©e le rĂŽle primordial de l’acide aminĂ© 120 dont la mutation affecte la reconnaissance d’AvrLm4 par Rlm4 sans toutefois altĂ©rer la reconnaissance d’AvrLm7 par Rlm7.Le contournement de la rĂ©sistance Rlm7 a Ă©tĂ© ensuite analysĂ© Ă  l’aide d’une importante collection de souches prĂ©levĂ©e sur deux sites expĂ©rimentaux indĂ©pendants (Grignon ; Versailles) sur une pĂ©riode de trois ans. Sur le premier site Ă©tait cultivĂ©e une variĂ©tĂ© Rlm7 en monoculture avec un travail du sol simplifiĂ© tandis que sur le second site, le mode de culture incluait rotation culturale et enfouissement par labour des rĂ©sidus de cultures. Il a ensuite Ă©tĂ© montrĂ© que, au contraire de la reconnaissance AvrLm4/Rlm4, un grand nombre d’évĂšnements de mutation peuvent ĂȘtre Ă  l’origine de la virulence d’une souche vis-Ă -vis de Rlm7. L’analyse molĂ©culaire des souches virulentes et avirulentes de cette collection a ainsi permis de rĂ©pertorier sept catĂ©gories d’évĂšnements de mutation. La grande majoritĂ© des cas concerne la dĂ©lĂ©tion d’AvrLm4-7 mais des mutations dues au RIP et plusieurs autres Ă©vĂšnements de mutation provoquant l’introduction prĂ©maturĂ©e de codons stop dans la sĂ©quence codante du gĂšne sont aussi observĂ©s. La majoritĂ© de ces Ă©vĂšnements de mutation sont liĂ©s Ă  la reproduction sexuĂ©e du champignon et ont lieu au sein mĂȘme de la parcelle d’étude. Le phĂ©notypage de cette collection a par ailleurs rĂ©vĂ©lĂ© un fort contraste entre les deux sites expĂ©rimentaux, dĂ©montrant ainsi l’importance des pratiques culturales dans le maintien de l’efficacitĂ© de la rĂ©sistance Rlm7 dans le temps. En effet, aprĂšs trois annĂ©es de culture de cultivars Rlm7, la frĂ©quence des souches virulentes a7 dans les populations du site de Versailles reste infĂ©rieure Ă  1 % contre environ 30 % sur le site de Grignon. Finalement, le phĂ©notypage de la collection de souches a Ă©galement montrĂ© que le contournement de Rlm7 s’accompagnait dans plus de 98% des souches de la rĂ©surgence de l’avirulence AvrLm3. Par l’étude de cette collection et par croisements gĂ©nĂ©tiques, j’ai pu montrer que AvrLm3 n’était pas un nouvel allĂšle d’avrLm4-7 mais un second gĂšne situĂ© en rĂ©gion tĂ©lomĂ©rique Ă  19.3 cM d’AvrLm4-7. J’ai Ă©galement dĂ©montrĂ© une interaction fonctionnelle antagoniste entre AvrLm4-7 et AvrLm3 qui empĂȘche la reconnaissance Rlm3 /AvrLm3 en prĂ©sence d’AvrLm4-7 et explique la restauration de l’avirulence AvrLm3 lors de la perte de l’avirulence AvrLm7.Par une association originale de biologie molĂ©culaire, de gĂ©nĂ©tique des populations et d’agronomie, j’ai ainsi pu apporter une nouvelle illustration Ă  la course aux armements entre un agent pathogĂšne et sa plante hĂŽte, les gĂšnes AvrLm3 et AvrLm4-7 utilisant deux stratĂ©gies distinctes afin d’échapper Ă  la reconnaissance de leurs gĂšnes de rĂ©sistance spĂ©cifiques

    Molecular evolution of the Leptosphaeria maculans avirulence gene AvrLm4-7 under selection pressure and its implication in the AvrLm3/Rlm3 recognition

    No full text
    Leptosphaeria maculans, agent de la nĂ©crose du collet des crucifĂšres, est un agent pathogĂšne majeur du colza (Brassica napus). La lutte gĂ©nĂ©tique est aujourd’hui le procĂ©dĂ© le plus utilisĂ© afin de protĂ©ger les cultures des attaques de ce champignon. Cette mĂ©thode se base principalement sur l’utilisation de cultivars possĂ©dant des gĂšnes de rĂ©sistance spĂ©cifique (Rlm) qui permettent le dĂ©clenchement des rĂ©actions de dĂ©fense de la plante parla reconnaissance directe ou indirecte des produits des gĂšnes d’avirulence correspondants (AvrLm) prĂ©sents dans la population pathogĂšne. Plusieurs de ces rĂ©sistances ont dĂ©jĂ  Ă©tĂ© massivement dĂ©ployĂ©es en France et dans le monde, connaissant dans un premier temps un fort succĂšs commercial grĂące Ă  la protection fournie, suivie d’une perte d’efficacitĂ© trĂšs rapide. Avant cette thĂšse, le nombre d’études au champ des processus impliquĂ©s dans le contournement d’un gĂšne de rĂ©sistance Ă©tait trĂšs limitĂ©, en particulier chez les champignons. L’objectif de cette thĂšse Ă©tait d'Ă©tudier l’évolution molĂ©culaire du gĂšne d’avirulence AvrLm4-7sous pression de sĂ©lection, en profitant de son clonage et de la commercialisation rĂ©cente de cultivars Rlm7, afin d’obtenir une Ă©tude prĂ©coce et dĂ©taillĂ©e des mĂ©canismes molĂ©culaires Ă  l’origine du contournement d’une rĂ©sistance spĂ©cifique. Le gĂšne AvrLm4-7 prĂ©sente l’originalitĂ© de coder pour une protĂ©ine responsable d’une double spĂ©cificitĂ© d’interaction vis-Ă -vis des gĂšnes Rlm4 et Rlm7. Dans un premier temps, j’ai pu valider par mutagenĂšse dirigĂ©e le rĂŽle primordial de l’acide aminĂ© 120 dont la mutation affecte la reconnaissance d’AvrLm4 par Rlm4 sans toutefois altĂ©rer la reconnaissance d’AvrLm7 par Rlm7.Le contournement de la rĂ©sistance Rlm7 a Ă©tĂ© ensuite analysĂ© Ă  l’aide d’une importante collection de souches prĂ©levĂ©e sur deux sites expĂ©rimentaux indĂ©pendants (Grignon ; Versailles) sur une pĂ©riode de trois ans. Sur le premier site Ă©tait cultivĂ©e une variĂ©tĂ© Rlm7 en monoculture avec un travail du sol simplifiĂ© tandis que sur le second site, le mode de culture incluait rotation culturale et enfouissement par labour des rĂ©sidus de cultures. Il a ensuite Ă©tĂ© montrĂ© que, au contraire de la reconnaissance AvrLm4/Rlm4, un grand nombre d’évĂšnements de mutation peuvent ĂȘtre Ă  l’origine de la virulence d’une souche vis-Ă -vis de Rlm7. L’analyse molĂ©culaire des souches virulentes et avirulentes de cette collection a ainsi permis de rĂ©pertorier sept catĂ©gories d’évĂšnements de mutation. La grande majoritĂ© des cas concerne la dĂ©lĂ©tion d’AvrLm4-7 mais des mutations dues au RIP et plusieurs autres Ă©vĂšnements de mutation provoquant l’introduction prĂ©maturĂ©e de codons stop dans la sĂ©quence codante du gĂšne sont aussi observĂ©s. La majoritĂ© de ces Ă©vĂšnements de mutation sont liĂ©s Ă  la reproduction sexuĂ©e du champignon et ont lieu au sein mĂȘme de la parcelle d’étude. Le phĂ©notypage de cette collection a par ailleurs rĂ©vĂ©lĂ© un fort contraste entre les deux sites expĂ©rimentaux, dĂ©montrant ainsi l’importance des pratiques culturales dans le maintien de l’efficacitĂ© de la rĂ©sistance Rlm7 dans le temps. En effet, aprĂšs trois annĂ©es de culture de cultivars Rlm7, la frĂ©quence des souches virulentes a7 dans les populations du site de Versailles reste infĂ©rieure Ă  1 % contre environ 30 % sur le site de Grignon. Finalement, le phĂ©notypage de la collection de souches a Ă©galement montrĂ© que le contournement de Rlm7 s’accompagnait dans plus de 98% des souches de la rĂ©surgence de l’avirulence AvrLm3. Par l’étude de cette collection et par croisements gĂ©nĂ©tiques, j’ai pu montrer que AvrLm3 n’était pas un nouvel allĂšle d’avrLm4-7 mais un second gĂšne situĂ© en rĂ©gion tĂ©lomĂ©rique Ă  19.3 cM d’AvrLm4-7. J’ai Ă©galement dĂ©montrĂ© une interaction fonctionnelle antagoniste entre AvrLm4-7 et AvrLm3 qui empĂȘche la reconnaissance Rlm3 /AvrLm3 en prĂ©sence d’AvrLm4-7 et explique la restauration de l’avirulence AvrLm3 lors de la perte de l’avirulence AvrLm7.Par une association originale de biologie molĂ©culaire, de gĂ©nĂ©tique des populations et d’agronomie, j’ai ainsi pu apporter une nouvelle illustration Ă  la course aux armements entre un agent pathogĂšne et sa plante hĂŽte, les gĂšnes AvrLm3 et AvrLm4-7 utilisant deux stratĂ©gies distinctes afin d’échapper Ă  la reconnaissance de leurs gĂšnes de rĂ©sistance spĂ©cifiques.Leptosphaeria maculans is a filamentous ascomycete causing stem canker of oilseed rape (Brassica napus). This disease is often controlled by the use of B. napus cultivars harbouring major resistance genes (Rlm). Direct or indirect recognition of the corresponding avirulence protein (AvrLm) in the pathogen triggers plant defence reactions. Several resistances have been massively deployed in France and worldwide, they initially showed commercial success due to the protection provided and in a second time, a very fast decrease of efficiency (resistance breakdown).Prior to this thesis, field studies of resistance gene breakdown mechanisms were rare, especially for fungi. The purpose of this PhD thesis was to study the molecular evolution of the avirulence gene AvrLm4-7 under selection pressure, by exploiting our knowledge of the gene, and the recent release of Rlm7 cultivars, to obtain an early and detailed study of the molecular mechanisms involved in a resistance gene breakdown. AvrLm4-7 induces resistance responses in plant harbouring either Rlm4 or Rlm7 and I validated by targeted point mutagenesis the central role of the amino acid 120 in the avrLm4-7-Rlm4 interaction. Its mutation prevents AvrLm4-7 recognition by Rlm4 without affecting avrLm4-7-Rlm7 recognition.Loss of avirulence towards Rlm7 was then studied by the analysis of an important isolate collection originating from two independent French experimental fields (Grignon; Versailles) over three years. In the first field was cropped Rlm7 cultivars in monoculture with low tillage agronomical practices whereas crop rotation and ploughing were done in the second field. In contrast to AvrLm4-Rlm4 evolution, a great number of mutations were found to explain the “gain” of virulence towards Rlm7. Seven mutational event categories were found. The great majority of these categories involve AvrLm4-7 deletion but mutation due to RIP and several other mutational events causing premature apparition of stop codons in the coding sequence of the gene were observed too. The majority of these events are linked to the sexual reproduction of the fungus and occurs in the experimental field.In addition, our work showed the importance of the cultural practices in preserving Rlm7 efficacy. Indeed, after three years using Rlm7 cultivars, a7 frequency was below 1% whereas representing around 30% of the isolates observed in Grignon.Finally, phenotyping of the isolate collection also showed the resurgence of an A3 phenotype linked with the loss of AvrLm7 avirulence in more than 98% of the isolates. Genetic analysis and collection phenotyping showed that AvrLm3 is not a new AvrLm4-7 allele but a distinct gene located in a telomeric region at 19.3 cM of AvrLm4-7. I also demonstrated that an antagonistic interaction between AvrLm4-7 and AvrLm3 exists: the presence of Avrlm4-7 prevents Rlm3 to detect AvrLm3 and explains the surge of the AvrLm3 avirulence along with the loss of the AvrLm7 avirulence.By an original association of molecular biology, population genetic and agronomy, this work provided a new illustration of the plant-pathogen arms race, AvrLm3 and AvrLm4-7 using two different strategies to escape their respective resistance genes

    \u3ci\u3eParacreptotrema blancoi\u3c/i\u3e n. gen., n. sp. (Digenea: Plagiorchiformes: Allocreadiidae) in the Olomina, \u3ci\u3ePriapichthys annectens\u3c/i\u3e (Osteichthyes: Poeciliidae), from the Área de Conservación Guanacaste, Costa Rica

    Get PDF
    A new species of allocreadiid digenean is described from Priapichthys annectens (Regan) (Osteichthyes: Poeciliidae) in the Área de Conservación Guanacaste, Costa Rica. A new genus, Paracreptotrema is proposed to accommodate this species as well as Fellodistomum mendezi Songandares-Bernal, 1955, which was previously described from another poeciliid, Brachyrhaphis episcopi, in Panama. Paracreptotrema differs from all other nominal genera of Allocreadiidae by a combination of its symmetrical testes, restricted vitellaria, and the lack of oral lappets (muscular \u27papillae\u27) or other such appendages. Paracreptotrema blancoi n. sp. resembles Creptotrema creptotrema Travassos, Artigas and Pereira, 1928, but differs in lacking ventral oral lappets and in having vitellaria extending posteriorly only to the level of the testes. It can be distinguished from P. mendezi n. comb. in having a relatively larger and more posteriorly placed acetabulum, vitellaria that are more restricted anteriorly, smaller testes, and a uterus that does not extend to the posterior end of the body. The genus seems to be restricted to poeciliids in Central America
    • 

    corecore