Comments on alternative calculations of the broadening of spectral lines of neutral sodium by H-atom collisions

With the exception of the sodium D-lines recent calculations of line broadening cross-sections for several multiplets of sodium by Leininger et al (2000) are in substantial disagreement with cross-sections interpolated from the tables of Anstee and O'Mara (1995) and Barklem and O'Mara (1997). The discrepancy is as large as a factor of three for the 3p-4d multiplet. The two theories are tested by using the results of each to synthesize lines in the solar spectrum. It is found that generally the data from the theory of Anstee, Barklem and O'Mara produce the best match to the observed solar spectrum. It is found, using a simple model for reflection of the optical electron by the potential barrier between the two atoms, that the reflection coefficient is too large for avoided crossings with the upper states of subordinate lines to contribute to line broadening, supporting the neglect of avoided ionic crossings by Anstee, Barklem and O'Mara for these lines. The large discrepancies between the two sets of calculations is a result of an approximate treatment of avoided ionic crossings for these lines by Leininger et al (2000).Comment: 18 pages, 5 ps figures included, to appear in J Phys B: At. Mol. Opt. Phy

Overexpression of Mcl-1 exacerbates lymphocyte accumulation and autoimmune kidney disease in lpr mice

Cell death by apoptosis has a critical role during embryonic development and in maintaining tissue homeostasis. In mammals, there are two converging apoptosis pathways: the ‘extrinsic’ pathway, which is triggered by engagement of cell surface ‘death receptors’ such as Fas/APO-1; and the ‘intrinsic’ pathway, which is triggered by diverse cellular stresses, and is regulated by prosurvival and pro-apoptotic members of the Bcl-2 family of proteins. Pro-survival Mcl-1, which can block activation of the proapoptotic proteins, Bax and Bak, appears critical for the survival and maintenance of multiple haemopoietic cell types. To investigate the impact on haemopoiesis of simultaneously inhibiting both apoptosis pathways, we introduced the vavP-Mcl-1 transgene, which causes overexpression of Mcl-1 protein in all haemopoietic lineages, into Faslpr/lpr mice, which lack functional Fas and are prone to autoimmunity. The combined mutations had a modest impact on myelopoiesis, primarily an increase in the macrophage/monocyte population in Mcl-1tg/lpr mice compared with lpr or Mcl-1tg mice. The impact on lymphopoiesis was striking, with a marked elevation in all major lymphoid subsets, including the non-conventional double-negative (DN) T cells (TCRβ+ CD4– CD8– B220+ ) characteristic of Faslpr/lpr mice. Of note, the onset of autoimmunity was markedly accelerated in Mcl-1tg/lpr mice compared with lpr mice, and this was preceded by an increase in immunoglobulin (Ig)-producing cells and circulating autoantibodies. This degree of impact was surprising, given the relatively mild phenotype conferred by the vavP-Mcl-1 transgene by itself: a two- to threefold elevation of peripheral B and T cells, no significant increase in the non-conventional DN T-cell population and no autoimmune disease. Comparison of the phenotype with that of other susceptible mice suggests that the development of autoimmune disease in Mcl-1tg/lpr mice may be influenced not only by Ig-producing cells but also other haemopoietic cell types

On the influence of Stark broadening on Si I lines in stellar atmospheres

We study the influence of Stark broadening and stratification effects on Si\i lines in the rapidly oscillating (roAp) star 10 Aql, where the Si\i 6142.48 \AA and 6155.13 \AA lines are asymmetrical and shifted. First we have calculated Stark broadening parameters using the semiclassical perturbation method for three Si\i lines: 5950.2 \AA, 6142.48 \AA and 6155.13 \AA. We revised the synthetic sp$ calculation code taking into account both Stark width and shift for these lines. From the comparison of our calculations with the observations we found that Stark broadening + the stratification effect can explain asymmetry of the Si\i 6142.48 \AA and 6155.13 \AA lines in the atmospere of roAp star 10 Aql.Comment: Accepted to A&

Modified p-modes in penumbral filaments?

Aims: The primary objective of this study is to search for and identify wave modes within a sunspot penumbra. Methods: Infrared spectropolarimetric time series data are inverted using a model comprising two atmospheric components in each spatial pixel. Fourier phase difference analysis is performed on the line-of-sight velocities retrieved from both components to determine time delays between the velocity signals. In addition, the vertical separation between the signals in the two components is calculated from the Stokes velocity response functions. Results: The inversion yields two atmospheric components, one permeated by a nearly horizontal magnetic field, the other with a less-inclined magnetic field. Time delays between the oscillations in the two components in the frequency range 2.5-4.5 mHz are combined with speeds of atmospheric wave modes to determine wave travel distances. These are compared to expected path lengths obtained from response functions of the observed spectral lines in the different atmospheric components. Fast-mode (i.e., modified p-mode) waves exhibit the best agreement with the observations when propagating toward the sunspot at an angle ~50 degrees to the vertical.Comment: 8 pages, 12 figures, accepted for publication in Astronomy & Astrophysic

Improved Laboratory Transition Probabilities for Neutral Chromium and Re-determination of the Chromium Abundance for the Sun and Three Stars

Branching fraction measurements from Fourier transform spectra in conjunction with published radiative lifetimes are used to determine transition probabilities for 263 lines of neutral chromium. These laboratory values are employed to derive a new photospheric abundance for the Sun: log $\epsilon$(Cr I)$_{\odot}$ = 5.64$\pm$0.01 ($\sigma = 0.07$). These Cr I solar abundances do not exhibit any trends with line strength nor with excitation energy and there were no obvious indications of departures from LTE. In addition, oscillator strengths for singly-ionized chromium recently reported by the FERRUM Project are used to determine: log $\epsilon$(Cr II)$_{\odot}$ = 5.77$\pm$0.03 ($\sigma = 0.13$). Transition probability data are also applied to the spectra of three stars: HD 75732 (metal-rich dwarf), HD 140283 (metal-poor subgiant), and CS 22892-052 (metal-poor giant). In all of the selected stars, Cr I is found to be underabundant with respect to Cr II. The possible causes for this abundance discrepancy and apparent ionization imbalance are discussed.Comment: 44 pages, 6 figure

First-Digit Law in Nonextensive Statistics

Nonextensive statistics, characterized by a nonextensive parameter $q$, is a promising and practically useful generalization of the Boltzmann statistics to describe power-law behaviors from physical and social observations. We here explore the unevenness of the first digit distribution of nonextensive statistics analytically and numerically. We find that the first-digit distribution follows Benford's law and fluctuates slightly in a periodical manner with respect to the logarithm of the temperature. The fluctuation decreases when $q$ increases, and the result converges to Benford's law exactly as $q$ approaches 2. The relevant regularities between nonextensive statistics and Benford's law are also presented and discussed.Comment: 11 pages, 3 figures, published in Phys. Rev.

Model selection for spectro-polarimetric inversions

Inferring magnetic and thermodynamic information from spectropolarimetric observations relies on the assumption of a parameterized model atmosphere whose parameters are tuned by comparison with observations. Often, the choice of the underlying atmospheric model is based on subjective reasons. In other cases, complex models are chosen based on objective reasons (for instance, the necessity to explain asymmetries in the Stokes profiles) but it is not clear what degree of complexity is needed. The lack of an objective way of comparing models has, sometimes, led to opposing views of the solar magnetism because the inferred physical scenarios are essentially different. We present the first quantitative model comparison based on the computation of the Bayesian evidence ratios for spectropolarimetric observations. Our results show that there is not a single model appropriate for all profiles simultaneously. Data with moderate signal-to-noise ratios favor models without gradients along the line-of-sight. If the observations shows clear circular and linear polarization signals above the noise level, models with gradients along the line are preferred. As a general rule, observations with large signal-to-noise ratios favor more complex models. We demonstrate that the evidence ratios correlate well with simple proxies. Therefore, we propose to calculate these proxies when carrying out standard least-squares inversions to allow for model comparison in the future.Comment: 16 pages, 2 figures, 8 tables, accepted for publication in Ap

Stellar Iron Abundances: non-LTE Effects

We report new statistical equilibrium calculations for Fe I and Fe II in the atmosphere of Late-Type stars. We used atomic models for Fe I and Fe II having respectively 256 and 190 levels, as well as 2117 and 3443 radiative transitions. Photoionization cross-sections are from the Iron Project. These atomic models were used to investigate non-LTE effects in iron abundances of Late-Type stars with different atmospheric parameters. We found that most Fe I lines in metal-poor stars are formed in conditions far from LTE. We derived metallicity corrections of about 0.3 dex with respect to LTE values, for the case of stars with [Fe/H] ~ -3.0. Fe II is found not to be affected by significant non-LTE effects. The main non-LTE effect invoked in the case of Fe I is overionization by ultraviolet radiation, thus classical ionization equilibrium is far to be satisfied. An important consequence is that surface gravities derived by LTE analysis are in error and should be corrected before final abundances corrections. This apparently solves the observed discrepancy between spectroscopic surface gravities derived by LTE analyses and those derived from Hipparcos parallaxes. A table of non-LTE [Fe/H] and log g values for a sample of metal-poor late-type stars is given.Comment: 22 pages, 9 figures, 1 table, ApJ style, accepte

Bucolic Complexes

We introduce and investigate bucolic complexes, a common generalization of systolic complexes and of CAT(0) cubical complexes. They are defined as simply connected prism complexes satisfying some local combinatorial conditions. We study various approaches to bucolic complexes: from graph-theoretic and topological perspective, as well as from the point of view of geometric group theory. In particular, we characterize bucolic complexes by some properties of their 2-skeleta and 1-skeleta (that we call bucolic graphs), by which several known results are generalized. We also show that locally-finite bucolic complexes are contractible, and satisfy some nonpositive-curvature-like properties.Comment: 45 pages, 4 figure

The Carina Project. V. The impact of NLTE effects on the iron content

We have performed accurate iron abundance measurements for 44 red giants (RGs) in the Carina dwarf spheroidal (dSph) galaxy. We used archival, high-resolution spectra (R~38,000) collected with UVES at ESO/VLT either in slit mode (5) or in fiber mode (39, FLAMES/GIRAFFE-UVES). The sample is more than a factor of four larger than any previous spectroscopic investigation of stars in dSphs based on high-resolution (R>38,000) spectra. We did not impose the ionization equilibrium between neutral and singly-ionized iron lines. The effective temperatures and the surface gravities were estimated by fitting stellar isochrones in the V, B-V color-magnitude diagram. To measure the iron abundance of individual lines we applied the LTE spectrum synthesis fitting method using MARCS model atmospheres of appropriate metallicity. We found evidence of NLTE effects between neutral and singly-ionized iron abundances. Assuming that the FeII abundances are minimally affected by NLTE effects, we corrected the FeI stellar abundances using a linear fit between FeI and FeII stellar abundance determinations. We found that the Carina metallicity distribution based on the corrected FeI abundances (44 RGs) has a weighted mean metallicity of [Fe/H]=-1.80 and a weighted standard deviation of sigma=0.24 dex. The Carina metallicity distribution based on the FeII abundances (27 RGs) gives similar estimates ([Fe/H]=-1.72, sigma=0.24 dex). The current weighted mean metallicities are slightly more metal poor when compared with similar estimates available in the literature. Furthermore, if we restrict our analysis to stars with the most accurate iron abundances, ~20 FeI and at least three FeII measurements (15 stars), we found that the range in iron abundances covered by Carina RGs (~1 dex) agrees quite well with similar estimates based on high-resolution spectra.Comment: Accepted for publication in PASP, 16 pages, 7 figures, 3 tables, 1 MR table Note: the electronic version of Table1 is included, but commented, in the tex fil