Excitation of the W triplet Delta (U), W singlet Delta (U), B prime triplet Sigma (U) (minus), and A prime singlet Epsison (U) (minus) states of N2 by electron impact

Electron energy-loss spectra have been obtained for N2 at 20.6 eV impact energy, and scattering angles of 10-138 deg. The differential cross section for excitation of the W triplet Delta(U) state is the largest triplet-state cross section at all scattering angles, and is the largest inelastic cross section at angles greater than 70 degrees. (Author Modified Abstract

A Composite Genome Approach to Identify Phylogenetically Informative Data from Next-Generation Sequencing

We have developed a novel method to rapidly obtain homologous genomic data for phylogenetics directly from next-generation sequencing reads without the use of a reference genome. This software, called SISRS, avoids the time consuming steps of de novo whole genome assembly, genome-genome alignment, and annotation. For simulations SISRS is able to identify large numbers of loci containing variable sites with phylogenetic signal. For genomic data from apes, SISRS identified thousands of variable sites, from which we produced an accurate phylogeny. Finally, we used SISRS to identify phylogenetic markers that we used to estimate the phylogeny of placental mammals. We recovered phylogenies from multiple datasets that were consistent with previous conflicting estimates of the relationships among mammals. SISRS is open source and freely available at https://github.com/rachelss/SISRS.Comment: 12 pages plus36 figures, 1 supplementary table, 3 supplementary figure

Not throwing out the baby with the bathwater: Bell's condition of local causality mathematically 'sharp and clean'

The starting point of the present paper is Bell's notion of local causality and his own sharpening of it so as to provide for mathematical formalisation. Starting with Norsen's (2007, 2009) analysis of this formalisation, it is subjected to a critique that reveals two crucial aspects that have so far not been properly taken into account. These are (i) the correct understanding of the notions of sufficiency, completeness and redundancy involved; and (ii) the fact that the apparatus settings and measurement outcomes have very different theoretical roles in the candidate theories under study. Both aspects are not adequately incorporated in the standard formalisation, and we will therefore do so. The upshot of our analysis is a more detailed, sharp and clean mathematical expression of the condition of local causality. A preliminary analysis of the repercussions of our proposal shows that it is able to locate exactly where and how the notions of locality and causality are involved in formalising Bell's condition of local causality.Comment: 14 pages. To be published in PSE volume "Explanation, Prediction, and Confirmation", edited by Dieks, et a

Research into anxiety of childhood: playing catch-up (to Olympic standard)

This special issue is the culmination of an ESRC seminar series grant awarded to the authors of this editorial. We named the seminar series CATTS (Child Anxiety, Theory and Treatment Seminars) and it took the form of six highly stimulating, one-day seminars on the subject of child anxiety, with participants from clinical and academic backgrounds and from Great Britain, Europe, the USA and Australia. Most of the authors in this publication, and a sister special issue in Cognitions and Emotion (2008), participated in the CATTS series

User guide for the GeoScour GB V1 dataset

This report describes the BGS GeoScour data product. The methods used to create the component datasets have been critically assessed and its fitness for purpose determined by specialists in BGS. GeoScour looks specifically and only at the geological factors that influence scour and does not consider any hydraulic or hydrodynamic factors. This document outlines the background to why the dataset was created, its potential uses and gives a brief description of the data layers. Technical information regarding the GIS and how the data was created is described and advice is provided on using the dataset

The Regolith of 4 Vesta - Inferences from Howardites

Asteroid 4 Vesta is quite likely the parent asteroid of the howardite, eucrite and diogenite meteorites - the HED clan. Eucrites and diogenites are the products of igneous processes; the former are basaltic composition rocks from flows, and shallow and deep intrusive bodies, whilst the latter are cumulate orthopyroxenites thought to have formed deep in the crust. Impact processes have excavated these materials and mixed them into a suite of polymict breccias. Howardites are polymict breccias composed mostly of clasts and mineral fragments of eucritic and diogenitic parentage, with neither end-member comprising more than 90% of the rock. Early work interpreted howardites as representing the lithified regolith of their parent asteroid. Recently, howardites have been divided into two subtypes; fragmental howardites, being a type of non-regolithic polymict breccia, and regolithic howardites, being lithified remnants of the active regolith of 4 Vesta. We are in the thralls of a collaborative investigation of the record of impact mixing contained within howardites, which includes studies of their mineralogy, petrology, bulk rock compositions, and bulk rock and clast noble gas contents. One goal of our investigation is to test the hypothesis that some howardites represent breccias formed from an ancient, well-mixed regolith on Vesta. Another is to use our results to further understand regolith processing on differentiated asteroids as compared to what has been learned from the Moon. We have made petrographic observations and electron microprobe analyses on 21 howardites and 3 polymict eucrites. We have done bulk rock analyses using X-ray fluorescence spectrometry and are completing inductively coupled plasma mass spectrometry analyses. Here, we discuss our petrologic and bulk compositional results in the context of regolith formation. Companion presentations describe the noble gas results and compositional studies of low-Ca pyroxene clasts

Increased angiogenic factor secretion by decidual natural killer cells from pregnancies with high uterine artery resistance alters trophoblast function.

STUDY QUESTION Are the concentrations of factors secreted by decidual natural killer (dNK) cells from pregnancies at high risk of poor spiral artery remodelling different to those secreted from pregnancies at low risk? SUMMARY ANSWER Expression levels of PLGF, sIL-2R, endostatin and angiogenin were significantly increased by dNK cells from high-risk pregnancies, and angiogenin and endostatin were found to alter trophoblast function. WHAT IS KNOWN ALREADY During early pregnancy, maternal uterine spiral arteries are remodelled from small diameter, low-flow, high-resistance vessels into larger diameter, higher flow vessels, with low-resistance. This change is essential for the developing fetus to obtain sufficient oxygen and nutrients. dNK cells have been implicated in this process. STUDY DESIGN, SIZE, DURATION dNK cells were isolated from first trimester terminations of pregnancies (obtained with local ethical approval) screened for normal- or high-resistance index, indicative of cases least (21%) likely to have developed pre-eclampsia had the pregnancy not been terminated (n = 18 each group). Secreted factors and the effects of these on the trophoblast cell line, SGHPL-4, were assessed in vitro. PARTICIPANTS/MATERIALS, SETTING, METHODS A multiplex assay was used to assess dNK cell-secreted factors. SGHPL-4 cell functions were assessed using time-lapse microscopy, 3D invasion assays, endothelial-like tube formation ability and western blot analysis. MAIN RESULTS AND THE ROLE OF CHANCE The expression levels of PLGF (P < 0.01), sIL-2R (P < 0.01), endostatin (P < 0.05) and angiogenin (P < 0.05) were significantly increased by dNK cells from high-risk pregnancies. Endostatin significantly decreased SGHPL-4 invasion (P < 0.05), SGHPL-4 tube formation (P < 0.05) and SGHPL-4 Aktser473 phosphorylation (P < 0.05). Angiogenin significantly decreased SGHPL-4 invasion (P < 0.05), but increased SGHPL-4 tube formation (P < 0.01) and decreased SGHPL-4 Aktser473 phosphorylation (P < 0.05). LIMITATIONS, REASONS FOR CAUTION The culture of dNK cells and protein concentrations in vitro may not fully represent the in vivo situation. Although SGHPL-4 cells are extravillous trophoblast derived, further studies would be needed to confirm the roles of angiogenin and endostatin in vivo. WIDER IMPLICATIONS OF THE FINDINGS The altered expression of secreted factors of dNK cells may contribute to pregnancy disorders associated with poor spiral artery remodelling. STUDY FUNDING/COMPETING INTEREST(S) This study was supported by the Wellcome Trust (project reference 091550). R.F. was a recipient of a PhD studentship from the Division of Biomedical Sciences, St. George's, University of London. The authors have no conflict of interests

The cuttlefish Sepia officinalis (Sepiidae, Cephalopoda) constructs cuttlebone from a liquid-crystal precursor

Cuttlebone, the sophisticated buoyancy device of cuttlefish, is made of extensive superposed chambers that have a complex internal arrangement of calcified pillars and organic membranes. It has not been clear how this structure is assembled. We find that the membranes result from a myriad of minor membranes initially filling the whole chamber, made of nanofibres evenly oriented within each membrane and slightly rotated with respect to those of adjacent membranes, producing a helical arrangement. We propose that the organism secretes a chitin-protein complex, which self-organizes layer-by-layer as a cholesteric liquid crystal, whereas the pillars are made by viscous fingering. The liquid crystallization mechanism permits us to homologize the elements of the cuttlebone with those of other coleoids and with the nacreous septa and the shells of nautiloids. These results challenge our view of this ultra-light natural material possessing desirable mechanical, structural and biological properties, suggesting that two self-organizing physical principles suffice to understand its formation.Spanish Ministerio de Ciencia e Innovacion [CGL2010-20748-CO2-01, CGL2013-48247-P, FIS2013-48444-C2-2-P]; Andalusian Consejeria de Innovacion Ciencia y Tecnologia [RNM6433]; (Sepiatech, PROMAR program) of the Portuguese Ministerio da Agricultura e do Mar, Portugal [31.03.05.FEP.002]; Junta de Andalucia [RNM363]; FP7 COST Action of the European Community. [TD0903]info:eu-repo/semantics/publishedVersio

Global Diffusion in a Realistic Three-Dimensional Time-Dependent Nonturbulent Fluid Flow

We introduce and study the first model of an experimentally realizable three-dimensional time-dependent nonturbulent fluid flow to display the phenomenon of global diffusion of passive-scalar particles at arbitrarily small values of the nonintegrable perturbation. This type of chaotic advection, termed {\it resonance-induced diffusion\/}, is generic for a large class of flows.Comment: 4 pages, uuencoded compressed postscript file, to appear in Phys. Rev. Lett. Also available on the WWW from http://formentor.uib.es/~julyan/, or on paper by reques