Energetically efficient behaviour may be common in biology, but it is not universal: a test of selective tidal stream transport in a poor swimmer

Selective tidal stream transport (STST) is a common migration strategy for a wide range of aquatic animals, facilitating energetically efficient transport, especially of species considered poor swimmers. We tested whether this mechanism applies during the upstream migration of a poor swimmer, the European river lamprey Lampetra fluviatilis, in a macrotidal estuary. Lamprey (n = 59) were acoustically tagged and tracked in a 40 km section of the River Ouse estuary (NE England) in autumn 2015. Against expectations, lamprey did not use STST and migrated upstream during flood, ebb and slack tide periods. Lamprey also migrated during both day and night in most of the study area, probably due to the high turbidity. The global migration speed (all individuals, over the entire track per individual) was (mean ± SD) 0.15 ± 0.07 m s-1. The migration speed varied significantly between tidal periods (0.38 ± 0.04 m s-1 during flooding tides, 0.12 ± 0.01 m s-1 during ebbing tides and 0.28 ± 0.01 m s-1 during slacks). It was also higher in areas not affected by tides during periods of high freshwater discharge (0.23 ± 0.08 m s-1) than in affected areas (0.17 ± 0.14 m s-1). If the energetic advantages of STST are not employed in macrotidal environments, it is likely that the fitness costs of that behaviour exceed potential energy savings, for example due to increased duration of exposure to predation. In conclusion, STST is evidently not universal in relatively poor swimmers; its use can vary between species and may vary under different conditions

Induction of defences and within-plant variation on palatability in two brown algae from the northern-central coast of Chile: effects of mesograzers and UV radiation

Macroalgae possess different defense mechanisms in response to herbivory. Some species produce anti-herbivore secondary metabolites, but production of these substances can be costly. Therefore, algae may produce defensive metabolites only in response to herbivory (inducible defense) or defend particular parts of the alga differentially (within-alga variation). In the present study, we examined whether two species of brown algae from the SE-Pacific show evidence of inducible chemical defense (non-polar compounds) or within-alga variation of defense, which we estimated in form of palatability of differently treated algae to amphipod grazers (with live algae and agar-based food containing non-polar algal extracts). In Glossophora kunthii (C. Agardh) J. Agardh, we observed an increase in palatability after algae were acclimated for 12 days without grazers. Subsequent addition of grazers for 12 days then resulted in a reduction of palatability indicating the existence of inducible defense. After removal of grazers for 12 days, these induced effects again disappeared. The reaction of G. kunthii was triggered even by the mere presence of grazers, which suggests that this alga can respond to waterborne cues by reducing palatability. Effects were only found for agar-based food containing non-polar extracts, but not for live algae, suggesting that some parts of the algae are undefended. Our second experiment on within-alga variation confirmed that only apical (growth region) and basal parts (near the holdfast region) of G. kunthii are defended against herbivores. For the second species, Macrocystis integrifolia Bory, the first experiment revealed no induction of defense, while the second experiment on within-alga variation showed that amphipods avoided basal parts and in particular stipes of M. integrifolia but only in live algae. Although both studied algal species differed substantially in their defensive strategies, their reaction was independent of the presence or absence of UV radiation. Thus, it appears that UV effects play only a minor role in anti-herbivore defense, which is in accordance with most previous studies

Causes and consequences of large clonal assemblies in a poplar hybrid zone.

Asexual reproduction is a common and fundamental mode of reproduction in plants. Although persistence in adverse conditions underlies most known cases of clonal dominance, proximal genetic drivers remain unclear, in particular for populations dominated by a few large clones. In this paper, we studied a clonal population of the riparian tree Populus alba in the Douro river basin (northwestern Iberian Peninsula) where it hybridizes with P. tremula, a species that grows in highly contrasted ecological conditions. We used 73 nuclear microsatellites to test whether genomic background (species ancestry) is a relevant cause of clonal success, and to assess the evolutionary consequences of clonal dominance by a few genets. Additional Genotyping-by-Sequencing (GBS) data were produced to estimate the age of the largest clones. We found that a few ancient (over a few thousand years old) and widespread genets dominate the population, both in terms of clone size and number of sexual offspring produced. Interestingly, large clones possessed two genomic regions introgressed from P. tremula, which may have favored their spread under stressful environmental conditions. At the population level, the spread of large genets was accompanied by an overall ancient (>0.1 Myr) but soft decline of effective population size. Despite this decrease, and the high clonality and dominance of sexual reproduction by large clones, the Douro hybrid zone still displays considerable genetic diversity and low inbreeding. This suggests that, even in extreme cases as in the Douro, asexual and sexual dominance of a few large, geographically-extended individuals does not threaten population survival. This article is protected by copyright. All rights reserved

TuberOus SClerosis registry to increase disease Awareness (TOSCA) – baseline data on 2093 patients

Angiomiolipoma; Epilepsia; TOSCAAngiomyolipoma; Epilepsy; TOSCAAngiomyolipoma; Epilèpsia; TOSCABackground Tuberous sclerosis complex (TSC) is a rare autosomal dominant genetic disorder. Many gaps remain in the understanding of TSC because of the complexity in clinical presentation. The TuberOus SClerosis registry to increase disease Awareness (TOSCA) is an international disease registry designed to address knowledge gaps in the natural history and management of TSC. Here, we present the baseline data of TOSCA cohort. Methods Patients of any age diagnosed with TSC, having a documented visit for TSC within the preceding 12 months, or newly diagnosed individuals were included. The registry includes a “core” section designed to record detailed background information on each patient including disease manifestations, interventions, and outcomes collected at baseline and updated annually. “Subsections” of the registry recorded additional data related to specific features of TSC. Results Baseline “core” data from 2093 patients enrolled from 170 sites across 31 countries were available at the cut-off date September 30, 2014. Median age of patients at enrollment was 13 years (range, 0–71) and at diagnosis of TSC was 1 year (range, 0–69). The occurrence rates of major manifestations of TSC included – cortical tubers (82.2%), subependymal nodules (78.2%), subependymal giant cell astrocytomas (24.4%), renal angiomyolipomas (47.2%), lymphangioleiomyomatosis (6.9%), cardiac rhabdomyomas (34.3%), facial angiofibromas (57.3%), forehead plaque (14.1%), ≥ 3 hypomelanotic macules (66.8%), and shagreen patches (27.4%). Epilepsy was reported in 1748 (83.5%) patients, of which 1372 were diagnosed at ≤ 2 years (78%). Intellectual disability was identified in 451 (54.9%) patients of those assessed. TSC-associated neuropsychiatric disorders (TAND) were diagnosed late, and not evaluated in 30–50% of patients. Conclusion TOSCA is the largest clinical case series of TSC to date. It provided a detailed description of the disease trajectory with increased awareness of various TSC manifestations. The rates of different features of TSC reported here reflect the age range and referral patterns of clinics contributing patients to the cohort. Documentation of TAND and LAM was poor. A widespread adoption of the international TSC assessment and treatment guidelines, including use of the TAND Checklist, could improve surveillance. The registry provides valuable insights into the necessity for monitoring, timing, and indications for the treatment of TSC.This study was funded by Novartis Pharma AG

Causes and consequences of large clonal assemblies in a poplar hybrid zone

Asexual reproduction is a common and fundamental mode of reproduction in plants. Although persistence in adverse conditions underlies most known cases of clonal dominance, proximal genetic drivers remain unclear, in particular for populations dominated by a few large clones. In this study, we studied a clonal population of the riparian tree Populus alba in the Douro river basin (northwestern Iberian Peninsula) where it hybridizes with Populus tremula, a species that grows in highly contrasted ecological conditions. We used 73 nuclear microsatellites to test whether genomic background (species ancestry) is a relevant cause of clonal success, and to assess the evolutionary consequences of clonal dominance by a few genets. Additional genotyping-by-sequencing data were produced to estimate the age of the largest clones. We found that a few ancient (over a few thousand years old) and widespread genets dominate the population, both in terms of clone size and number of sexual offspring produced. Interestingly, large clones possessed two genomic regions introgressed from P. tremula, which may have favoured their spread under stressful environmental conditions. At the population level, the spread of large genets was accompanied by an overall ancient (>0.1 Myr) but soft decline of effective population size. Despite this decrease, and the high clonality and dominance of sexual reproduction by large clones, the Douro hybrid zone still displays considerable genetic diversity and low inbreeding. This suggests that even in extreme cases as in the Douro, asexual and sexual dominance of a few large, geographically extended individuals does not threaten population survival

Pathological and Structural Assessment of a Residential Building in Lota, Chile

The urban development of Lota city (Chile) was strongly influenced by the coal-mining industry during 19th and 20th century. Virtually, the entire city was built, initially, by Matias Cousiño’s Coal Company and, later, by the National Coal Company of Chile (ENACAR). At the beginning of the 21st century, the city began to experience a decline because of the closure of coal mines. This situation affected not only the economy and employment of the city, but also the maintenance of its infrastructure and the conservation of historical buildings. The “Anibal Pinto Building” is a 5 stories reinforced concrete and masonry structure, built in 1966. Besides of an aggressive coastal environment and poor maintenance, this building has experienced one major earthquake (Mw 8.8 in 2010). As a consequence, cracks, concrete spalding and reinforcement corrosion is observed in several structural elements. To evaluate the current state of the building and determine it remaining operation life, a structural assessment procedure was implemented based on field explorations, laboratory analysis and numerical modeling. Field explorations considered tests to identify carbonation, humidity, porosity, concrete hardness. While, laboratory analysis included compression test of concrete cores extracted from the building. These investigations were developed with the aim of determine the mechanical properties of buildings materials and for identifying pathologies that affects reinforced concrete. The experimental data was used to elaborate a finite element model in SAP 2000 to estimate building performance compared to the current seismic regulation in Chile

Zero-order controlled release of ciprofloxacin-HCl from a reservoir-based, bioresorbable and elastomeric device

A reservoir-based device constructed of a completely biodegradable elastomer can enable several new implantation and insertion options for localized drug therapy, particularly in the case of urological therapies. We performed an in vitro performance evaluation of an implantable, bio-resorbable device that supplies short-term controlled release of ciprofloxacin-HCl (CIP). The proposed device functions through a combination of osmosis and diffusion mechanisms to release CIP for short-term therapies of a few weeks duration. Poly(glycerol-co-sebacic acid) (PGS) was cast in a tubular geometry with solid drug powder packed into its core and a micro-machined release orifice drilled through its wall. Drug release experiments were performed to determine the effective release rate from a single orifice and the range of orifice sizes in which controlled zero-order release was the main form of drug expulsion from the device. It is demonstrated that PGS is sufficiently permeable to water to allow the design of an elementary osmotic pump for drug delivery. Indeed, PGS's water permeability is several orders of magnitude larger than commonly used cellulose acetate for elementary osmotic pumps.Deshpande Center for Technological InnovationSamsung Scholarship Foundatio

Ecología de invasiones marinas en Chile continental: ¿Qué sabemos y que nos falta por saber?

The Chilean coast has fewer reports of introduced species for other shores worldwide, which could correspond to a natural phenomenon generated by oceanographic conditions, or an artifact caused by lack of available information. We analyzed 71 papers indexed in Web of Science related with ecology of marine invasions in the Chilean coast, published between 1998-2014, and we determined the current state of the discipline in Chile, and identified the trends (e.g., temporal, spatial, taxonomic) of the investigation. Most of the papers studied species naturalization stage, and very few deal with invasive species. The number of papers per year increases linearly with time, suggesting a growing interest of the scientific community in the study of the ecology of marine invasions. The amount of available information (i.e., number of publications) is not homogeneous among administrative regions, and most papers have examined specific sectors within each region (usually near the regional capital). Regions with high maritime traffic (e.g., Valparaíso, Magallanes) have been scarcely studied. With the exception of Coquimbo and Los Lagos, researches by region have been performed on a few taxa. Hardly any studies cover large spatial scales, although several of them do perform monitoring programs on longer time scales (e.g., monthly, yearly). Our results suggest that the number of exotic species in Chile may be underestimated. Field observations, periodic updating of catalogs and use of molecular tools are proposed as measures to achieve a greater understanding of the issue at national level.La costa chilena presenta menos reportes de especies introducidas respecto a otras costas a nivel mundial, lo que podría corresponder a un fenómeno natural generado por condiciones oceanográficas, o bien a un artefacto producido por falta de información disponible. Mediante el análisis de 71 trabajos indexados en Web of Science, relacionados con ecología de invasiones marinas en la costa chilena, publicados entre 1998-2014, determinamos el estado actual de esta disciplina en Chile, e identificamos las tendencias de las investigaciones realizadas. La mayoría de las publicaciones se relacionan con especies en etapa de naturalización, y pocas con especies invasoras. El número de publicaciones por año incrementa linealmente, sugiriendo un creciente interés de la comunidad científica respecto al tema. La cantidad de información disponible (i.e., número de publicaciones) no es homogénea entre las regiones administrativas, y la mayoría de los trabajos son realizados sectores puntuales dentro de cada región (usualmente cercanos a la capital regional). Regiones con alto tráfico marítimo (e.g., Valparaíso, Magallanes) han sido muy poco estudiadas. A excepción de la región de Coquimbo y Los Lagos, los trabajos por región apuntan a unos pocos taxa. Muy pocos trabajos abarcan grandes escalas espaciales, aunque varios de ellos realizan experimentos a escalas de tiempo mayores (e.g., mensual, anual). Nuestros resultados permiten sugerir que el número de especies reportadas como introducidas en Chile podría estar subestimado. Observaciones en terreno, actualización periódica de catastros y utilización de herramientas moleculares, son propuestos como medidas para una mayor comprensión del tema a nivel nacional

Distribución geográfica y descripción de cuatro especies de cirripedios pelágicos a lo largo de la costa chilena del Pacífico sur este - una aproximación zoogeográfica

The majority of zoogeographic studies along the Chilean Pacific coast have focused on benthic organisms and oceanographic conditions are considered the main factors influencing their distributions. Herein we examined the geographic distribution of pelagic barnacles of the family Lepadidae collected from floating macroalgae at seven sampling areas between 23 and 50° S. Four species were encountered and they are briefly described herein. The most abundant northern species was Lepas anatifera, and it diminished in abundance towards the south (33° S). Moreover, this species was not found in waters with a sea surface temperature (SST) of less than ~18 ºC. Lepas australis, primarily a circumpolar West Wind Drift species, diminished in abundance towards the north (33° S). This species was restricted to waters of < 18 ºC SST. A third species, L. pectinata, was encountered throughout almost the entire study area, but it was most abundant between 29 and 33° S. The fourth species, Dosima fascicularis, was only found at two sampling areas, namely at 27° S and 33° S, and this is the first record of this species from the central coast of Chile. The distributional pattern of the pelagic barnacles found herein corresponds to the three main zoogeographic regions as revealed by the majority of previous studies based on littoral organisms: the northern Peru-Chilean Province, the southern Magellanic Province, and the central Chilean Transition Zone where the two provinces overlap. Even though the present study only considers four species of pelagic barnacles, the results support the hypotheses on the importance of oceanographic conditions (in particular SST) in determining the zoogeographic patterns along the south east Pacific coast of Chile