116 research outputs found

    Electrochemical detection of oxacillin resistance with SimpleStat : a low cost integrated potentiostat and sensor platform

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    Testing outside the laboratory environment, such as point of care testing, is a rapidly evolving area with advances in the integration of sample handling, measurement and sensing elements widely reported. Low cost, simple to use systems are important in this context because they provide a route to devices that can be used outside the laboratory and could be implemented in low resource settings where advanced diagnostic testing is often unavailable. Here, we present an open source highly simplified electrochemical platform, called SimpleStat, that has been programmed to perform differential pulse voltammetry and can be used to detect the presence of OXA-1 DNA sequences for oxacillin resistance. This DNA sensor can be used to specifically detect the presence of the OXA-1 gene, contrasted to the tetA gene which encodes for tetracycline resistance. These measurements were performed with both polycrystalline gold electrodes as a benchmark and electrodes integrated into the SimpleStat printed circuit

    Mineralogy and Petrology of COMET WILD2 Nucleus Samples

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    The sample return capsule of the Stardust spacecraft will be recovered in northern Utah on January 15, 2006, and under nominal conditions it will be delivered to the new Stardust Curation Laboratory at the Johnson Space Center two days later. Within the first week we plan to begin the harvesting of aerogel cells, and the comet nucleus samples they contain for detailed analysis. By the time of the LPSC meeting we will have been analyzing selected removed grains for more than one month. This presentation will present the first results from the mineralogical and petrological analyses that will have been performed

    Impedance testing of porous Si3N4 scaffolds for skeletal implant applications

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    Si3N4 ceramics show excellent characteristics of mechanical and chemical resistance in combination with good biocompatibility, antibacterial property and radiolucency. Therefore, they are intensively studied as structural materials in skeletal implant applications. Despite their attractive properties, there are limited data in the field about in vitro studies of cellular growth on ceramic implant materials. In this study, the growth of bone cells was investigated on porous Silicon Nitride (Si3N4) ceramic implant by using electrochemical impedance spectroscopy (EIS). Partial sintering was performed at 1700 °C with limited amount of sintering additive for the production of porous Si3N4 scaffolds. All samples were then sterilized by using ethylene oxide followed by culturing MG-63 osteosarcoma cells on the substrates for in vitro assays. At 20 and 36 hours, EIS was performed and results demonstrated that magnitude of the impedance as a result of the changes in the culture media increased after incubation with osteosarcoma cells. The changes are attributed to the cellular uptake of charged molecules from the media. Si3N4 samples appear to show large impedance magnitude changes, especially between 100 Hz and 1 Hz. Impedance changes were also correlated with WST-1 measurements (36 hr) and DAPI results

    Novel nanofibre integrated SiN scaffolds for skeletal implant applications

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    Nowadays, increase in number of orthopedic surgery accelerates global interest in the world orthopedic industry. Apart from the increased number of the surgery, the rapid recovery becomes very important following the initial operations. One of the common problem for the patients is the biocompatibility between the implant and tissue [1-3]. In this study, we aimed to improve attachment of the implant to the tissue in addition to provide high biocompatibility. After preparing a scaffold by using SiN subsequently we have coated with fine gelatine nanofibers. SiN is one of the most commonly used bioactive ceramic class, and also its biocompatibility is good enough

    Evaluating Atlantic bluefin tuna harvest strategies that use conventional genetic tagging data

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    An individual tagging model was implemented within the spatial, seasonal, multi-stock, multi-fleet operating models of the peer-reviewed Management Strategy Evaluation (MSE) framework for Atlantic bluefin tuna to evaluate the benefits of a harvest strategy that utilizes conventional gene tagging. A multi-year Brownie estimator was developed to test the accuracy and precision of exploitation rate estimates arising from gene tagging programs with various scenarios for spatial release distribution, release numbers and fishery exploitation rates. Harvest strategies that used the Brownie estimator were tested to evaluate yield and resource conservation performance relative to idealized management using perfect information. For the eastern stock, releasing 1,000 fish throughout the Atlantic and genotyping 27% of all landed fish at an estimated cost of US2Mwassufficienttoobtainestimatesofexploitationratewithacoefficientofvariationof202M was sufficient to obtain estimates of exploitation rate with a coefficient of variation of 20%. For the western stock, the same precision in exploitation rate estimates required the release of 1,300 fish and genotyping rate of 35% at an estimated cost of US2.5M. Harvest strategies using the gene tagging data provided expected yield and resource conservation performance that was not substantially lower than a harvest strategy assuming using perfect information regarding vulnerable biomass. Reducing the number of releases most strongly affected the worst-case ‘lower-tail’ outcomes for West area yield and eastern stock biomass. Conventional gene tagging harvest strategies offer a promising basis for calculating management advice for Atlantic bluefin tuna that may be cheaper, simpler, and more robust than the current conventional stock assessment paradigm

    Effects of antiplatelet therapy on stroke risk by brain imaging features of intracerebral haemorrhage and cerebral small vessel diseases: subgroup analyses of the RESTART randomised, open-label trial

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    Background Findings from the RESTART trial suggest that starting antiplatelet therapy might reduce the risk of recurrent symptomatic intracerebral haemorrhage compared with avoiding antiplatelet therapy. Brain imaging features of intracerebral haemorrhage and cerebral small vessel diseases (such as cerebral microbleeds) are associated with greater risks of recurrent intracerebral haemorrhage. We did subgroup analyses of the RESTART trial to explore whether these brain imaging features modify the effects of antiplatelet therapy

    An electrochemical SARS-CoV-2 biosensor inspired by glucose test strip manufacturing processes

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    Accurate and rapid diagnostic tests are critical to reducing the impact of SARS-CoV-2. This study presents early, but promising measurements of SARS-CoV-2 using the ACE2 enzyme as the recognition element to achieve clinically relevant detection. The test provides a scalable route to sensitive, specific, rapid and low cost mass testing

    Copy Number Variation Affecting the Photoperiod-B1 and Vernalization-A1 Genes Is Associated with Altered Flowering Time in Wheat (Triticum aestivum)

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    The timing of flowering during the year is an important adaptive character affecting reproductive success in plants and is critical to crop yield. Flowering time has been extensively manipulated in crops such as wheat (Triticum aestivum L.) during domestication, and this enables them to grow productively in a wide range of environments. Several major genes controlling flowering time have been identified in wheat with mutant alleles having sequence changes such as insertions, deletions or point mutations. We investigated genetic variants in commercial varieties of wheat that regulate flowering by altering photoperiod response (Ppd-B1 alleles) or vernalization requirement (Vrn-A1 alleles) and for which no candidate mutation was found within the gene sequence. Genetic and genomic approaches showed that in both cases alleles conferring altered flowering time had an increased copy number of the gene and altered gene expression. Alleles with an increased copy number of Ppd-B1 confer an early flowering day neutral phenotype and have arisen independently at least twice. Plants with an increased copy number of Vrn-A1 have an increased requirement for vernalization so that longer periods of cold are required to potentiate flowering. The results suggest that copy number variation (CNV) plays a significant role in wheat adaptation

    Long-lived magnetism on chondrite parent bodies

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    publisher: Elsevier articletitle: Long-lived magnetism on chondrite parent bodies journaltitle: Earth and Planetary Science Letters articlelink: http://dx.doi.org/10.1016/j.epsl.2017.07.035 content_type: article copyright: © 2017 The Authors. Published by Elsevier B.V.© 2017 The Authors. Published by Elsevier B.V. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). The attached file is the published version of the article

    SARS-CoV-2 aptasensors based on electrochemical impedance spectroscopy and low-cost gold electrode substrates

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    SARS-CoV-2 diagnostic practices broadly involve either quantitative polymerase chain reaction (qPCR)-based nucleic amplification of viral sequences or antigen-based tests such as lateral flow assays (LFAs). Reverse transcriptase-qPCR can detect viral RNA and is the gold standard for sensitivity. However, the technique is time-consuming and requires expensive laboratory infrastructure and trained staff. LFAs are lower in cost and near real time, and because they are antigen-based, they have the potential to provide a more accurate indication of a disease state. However, LFAs are reported to have low real-world sensitivity and in most cases are only qualitative. Here, an antigen-based electrochemical aptamer sensor is presented, which has the potential to address some of these shortfalls. An aptamer, raised to the SARS-CoV-2 spike protein, was immobilized on a low-cost gold-coated polyester substrate adapted from the blood glucose testing industry. Clinically relevant detection levels for SARS-CoV-2 are achieved in a simple, label-free measurement format using sample incubation times as short as 15 min on nasopharyngeal swab samples. This assay can readily be optimized for mass manufacture and is compatible with a low-cost meter
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