Food Web Structure of a Subtropical South American Stream with Particular Focus on the Co-Evolution of Form and Function in an Endemic Species Flock

I analyzed the food web structure of the Rio Cuareim, a subtropical piedmont stream located along the Uruguay-Brazil border. I used stable isotope ratios and stomach content analysis to delineate the trophic guild structure of fishes and invertebrates. Additionally, using geometric morphometrics I analyzed the co-evolution of form and function in a group of cichlid fish (Crenicichla). Lastly, I contrasted my findings with those from temperate and tropical systems

Diet and body shape among populations of Bryconamericus iheringii (Otophysi: Characidae) across the Campos Sulinos ecosystem

Alterations in natural landscapes, mainly caused by anthropic pressures, have been threatening the world’s biomes, including aquatic environments and its biota. This study describes the diet of Bryconamericus iheringii, and how its body shape relates to environmental variables in populations of 22 streams. A wide array of food items were found, mainly composed of allochthonous plants (50.5%) and autochthonous invertebrates (25.2%). Even though food items remained almost the same, the predominant food group significantly differed among streams, mainly in relation to environmental characteristics. There was variation in body shape primarily associated with body depth and length of the pre-dorsal region; however, these differences did not correspond with streams. PLS-CA analyses indicated that environmental characteristics, such as substrate type, percentage of marginal vegetation have some influence over food items availability but not on body shape. This may be because B. iheringii is a non-specialist species capable of prey switching based on availability due to an intermediate body shape suited for generalist feeding habits.Alterações em paisagens naturais, principalmente as causadas por pressão antrópica, tem ameaçado os biomas mundiais, incluindo ambientes aquáticos e sua biota. Este estudo descreve a dieta de B. iheringii e como seu formato corporal se relaciona com variáveis ambientais, em populações de 22 riachos. Uma grande variedade de itens alimentares foi encontrada, principalmente compostos por plantas alóctones (50,5%) e invertebrados autóctones (25,2%). Ainda que os itens alimentares tenham permanecido quase os mesmos, o grupo alimentar predominante diferiu significativamente entre riachos, principalmente devido a características ambientais. Ocorreu variação no formato corporal principalmente associado com profundidade do corpo e comprimento da região pré-dorsal; entretanto, tais diferenças não corresponderam aos agrupamentos por riacho. A análise PLS-CA indicou que as características ambientais, tais como tipo de substrato, porcentagem de vegetação marginal exercem alguma influência sobre a disponibilidade dos itens alimentares, mas não sobre o formato corporal. Isso pode ocorrer por B. iheringii ser uma espécie não especialista com capacidade de mudar suas presas de acordo a com disponibilidade das mesmas, isto, devido ao seu formato corporal intermediário adequado a hábitos generalistas

Diet and body shape among populations of Bryconamericus iheringii (Otophysi: Characidae) across the Campos Sulinos ecosystem

Alterations in natural landscapes, mainly caused by anthropic pressures, have been threatening the world’s biomes, including aquatic environments and its biota. This study describes the diet of Bryconamericus iheringii, and how its body shape relates to environmental variables in populations of 22 streams. A wide array of food items were found, mainly composed of allochthonous plants (50.5%) and autochthonous invertebrates (25.2%). Even though food items remained almost the same, the predominant food group significantly differed among streams, mainly in relation to environmental characteristics. There was variation in body shape primarily associated with body depth and length of the pre-dorsal region; however, these differences did not correspond with streams. PLS-CA analyses indicated that environmental characteristics, such as substrate type, percentage of marginal vegetation have some influence over food items availability but not on body shape. This may be because B. iheringii is a non-specialist species capable of prey switching based on availability due to an intermediate body shape suited for generalist feeding habits.Alterações em paisagens naturais, principalmente as causadas por pressão antrópica, tem ameaçado os biomas mundiais, incluindo ambientes aquáticos e sua biota. Este estudo descreve a dieta de B. iheringii e como seu formato corporal se relaciona com variáveis ambientais, em populações de 22 riachos. Uma grande variedade de itens alimentares foi encontrada, principalmente compostos por plantas alóctones (50,5%) e invertebrados autóctones (25,2%). Ainda que os itens alimentares tenham permanecido quase os mesmos, o grupo alimentar predominante diferiu significativamente entre riachos, principalmente devido a características ambientais. Ocorreu variação no formato corporal principalmente associado com profundidade do corpo e comprimento da região pré-dorsal; entretanto, tais diferenças não corresponderam aos agrupamentos por riacho. A análise PLS-CA indicou que as características ambientais, tais como tipo de substrato, porcentagem de vegetação marginal exercem alguma influência sobre a disponibilidade dos itens alimentares, mas não sobre o formato corporal. Isso pode ocorrer por B. iheringii ser uma espécie não especialista com capacidade de mudar suas presas de acordo a com disponibilidade das mesmas, isto, devido ao seu formato corporal intermediário adequado a hábitos generalistas

Cave-adapted evolution in the North American amblyopsid fishes inferred using phylogenomics and geometric morphometrics

© 2020 The Authors. Evolution © 2020 The Society for the Study of Evolution. Cave adaptation has evolved repeatedly across the Tree of Life, famously leading to pigmentation and eye degeneration and loss, yet its macroevolutionary implications remain poorly understood. We use the North American amblyopsid fishes, a family spanning a wide degree of cave adaptation, to examine the impact of cave specialization on the modes and tempo of evolution. We reconstruct evolutionary relationships using ultraconserved element loci, estimate the ancestral histories of eye-state, and examine the impact of cave adaptation on body shape evolution. Our phylogenomic analyses provide a well-supported hypothesis for amblyopsid evolutionary relationships. The obligate blind cavefishes form a clade and the cave-facultative eyed spring cavefishes are nested within the obligate cavefishes. Using ancestral state reconstruction, we find support for at least two independent subterranean colonization events within the Amblyopsidae. Eyed and blind fishes have different body shapes, but not different rates of body shape evolution. North American amblyopsids highlight the complex nature of cave-adaptive evolution and the necessity to include multiple lines of evidence to uncover the underlying processes involved in the loss of complex traits

Island- and lake-like parallel adaptive radiations replicated in rivers

Parallel adaptive radiations have arisen following the colonization of islands by lizards and lakes by fishes. In these classic examples, parallel adaptive radiation is a response to the ecological opportunities afforded by the colonization of novel ecosystems and similar adaptive landscapes that favour the evolution of similar suites of ecomorphs, despite independent evolutionary histories. Here, we demonstrate that parallel adaptive radiations of cichlid fishes arose in South American rivers. Speciation-assembled communities of pike cichlids (Crenicichla) have independently diversified into similar suites of novel ecomorphs in the Uruguay and Parana´ Rivers, including crevice feeders, periphyton grazers and molluscivores. There were bursts in phenotypic evolution associated with the colonization of each river and the subsequent expansion of morphospace following the evolution of the ecomorphs. These riverine clades demonstrate that characteristics emblematic of textbook parallel adaptive radiations of island- and lake-dwelling assemblages are feasible evolutionary outcomes even in labile ecosystems such as rivers.Facultad de Ciencias Naturales y Muse

Data from: Ecological opportunity alters the timing and shape of adaptive radiation

The uneven distribution of diversity is a conspicuous phenomenon across the tree of life. Ecological opportunity is a prominent catalyst of adaptive radiation and therefore may alter patterns of diversification. We evaluated the distribution of shifts in diversification rates across the cichlid phylogeny and the distribution of major clades across phylogenetic space. We also tested if ecological opportunity influenced these patterns. Colonization-associated ecological opportunity altered the tempo and mode of diversification during the adaptive radiation of cichlid fishes. Clades that arose following colonization events diversified faster than other clades. Speciation rate shifts were non-randomly distributed across the phylogeny such that they were disproportionally concentrated around nodes that corresponded with colonization events (i.e., of continents, river basins, or lakes). Young clades tend to expand faster than older clades; however, colonization-associated ecological opportunity accentuated this pattern. There was an interaction between clade age and ecological opportunity that explained the trajectory of clades through phylogenetic space over time. Our results indicate that ecological opportunities afforded by continental- and ecosystem-scale colonization events explain the dramatic speciation rate heterogeneity and phylogenetic imbalance that arose during the evolutionary history of cichlid fishes

Data from: Adaptive radiation in labrid fishes: a central role for functional innovations during 65 My of relentless diversification

Early burst patterns of diversification have become closely linked with concepts of adaptive radiation, reflecting interest in the role of ecological opportunity in modulating diversification. But, this model has not been widely explored on coral reefs, where biodiversity is exceptional, but many lineages have high dispersal capabilities and a pan-tropical distribution. We analyze adaptive radiation in labrid fishes, arguably the most ecologically dominant and diverse radiation of fishes on coral reefs. We test for time-dependent speciation, trophic diversification, and origination of 15 functional innovations, and early bursts in a series of functional morphological traits associated with feeding and locomotion. We find no evidence of time-dependent or early burst evolution. Instead, the pace of speciation, ecological diversification, and trait evolution has been relatively constant. The origination of functional innovations has slowed over time, although few arose early. The labrid radiation seems to have occurred in response to extensive and still increasing ecological opportunity, but within a rich community of antagonists that may have prevented abrupt diversification. Labrid diversification is closely tied to a series of substantial functional innovations that individually broadened ecological diversity, ultimately allowing them to invade virtually every trophic niche held by fishes on coral reefs

Data from: Phylogenomics of pike cichlids (Cichlidae: Crenicichla): the rapid evolution and trophic diversification of an incipient species flock

The rapid rise of phenotypic and ecological diversity in independent lake-dwelling groups of cichlids is emblematic of the East African Great Lakes. In this study, we show that similar ecologically-based diversification has occurred in pike cichlids (Crenicichla) throughout the Uruguay River drainage of South America. We collected genomic data from nearly 500 ultraconserved element (UCEs) loci and >260,000 base pairs across 33 species, to obtain a phylogenetic hypothesis for the major species-groups and to evaluate the relationships and genetic structure among five closely-related, endemic, co-occurring species (the Uruguay River species flock; URSF). Additionally, we evaluated ecological divergence of the URSF based on body and lower pharyngeal jaw (LPJ) shape and gut contents. Across the genus, we recovered novel relationships among the species groups. We found strong support for the monophyly of the URSF; however, relationships among these species remain problematic, likely because of the rapid and recent evolution of this group. Clustered co-ancestry analysis recovered most species as well delimited genetic groups. The URSF species exhibit species-specific body and LPJ shapes associated with specialized trophic roles. Collectively, our results suggest that the URSF consists of incipient species that arose via ecological speciation associated with the exploration of novel trophic roles

Functional diversification within a predatory species flock.

Ecological speciation is well-known from adaptive radiations in cichlid fishes inhabiting lentic ecosystems throughout the African rift valley and Central America. Here, we investigate the ecological and morphological diversification of a recently discovered lotic predatory Neotropical cichlid species flock in subtropical South America. We document morphological and functional diversification using geometric morphometrics, stable C and N isotopes, stomach contents and character evolution. This species flock displays species-specific diets and skull and pharyngeal jaw morphology. Moreover, this lineage appears to have independently evolved away from piscivory multiple times and derived forms are highly specialized morphologically and functionally relative to ancestral states. Ecological speciation played a fundamental role in this radiation and our data reveal novel conditions of ecological speciation including a species flock that evolved: 1) in a piscivorous lineage, 2) under lotic conditions and 3) with pronounced morphological novelties, including hypertrophied lips that appear to have evolved rapidly

Phylogenomics of pike cichlids (Cichlidae: Crenicichla ) of the C. mandelburgeri species complex: rapid ecological speciation in the Iguazú River and high endemism in the Middle Paraná basin

The Crenicichla mandelburgeri species complex from the Middle Parana basin is a diverse group of cichlid species and contains all known ecomorphs found within the entire genus Crenicichla. Here, we study the phylogenetic relationships within the C. mandelburgeri species complex using ddRAD sequencing with focus on its two candidate species flocks endemic to the Iguazu and Urugua-i Rivers, and on two putative sympatric species in the Piray Guazu River. These species flocks include four and three syntopic species, respectively, which are strongly adapted to different trophic niches and include derived ecomorphs of Crenicichla (molluscivores, a periphyton grazer, and a crevice-feeding thick-lipped invertivore). Our phylogenomic analyses strongly support monophyly and rapid diversification of the Iguazu species flock, but reveal more complex evolutionary histories in the Urugua-i and Piray Guazu tributaries. Most species in the Middle Parana, including one species in the Urugua-i and both species in the Piray Guazu show cytonuclear discordance, and in both of these tributaries, we also found hybridization in one of the resident species. Population-level analyses reveal complete isolation of the Iguazu species and coupled with their dramatic ecological diversity, this radiation exemplifies characteristics of a species flock that arose via ecological speciation.Facultad de Ciencias Naturales y MuseoComisión de Investigaciones Científicas de la provincia de Buenos Aire