Dynamics of 1,3-diphenylpropane tethered to the interior pore surfaces of MCM-41

The diffusive motions of covalently tethered 1,3-diphenylpropane (DPP) via a silyl-aryl-ether linkage in the mesopores of MCM-41 were studied by quasielastic neutron scattering. The geometric effect of pore radius was investigated with samples having pores that ranged from 1.6 to 3.0 nm in diameter and highest achievable DPP grafting density. The effect of molecular crowding was investigated in 3.0 rim diameter pores for surface coverage ranging from 0.60 to 1.61 DPP/nm(2). Temperature dependence was determined for large pore diameter samples from 240 to 370 K. As the DPP molecules remain attached over this entire temperature range, data were analyzed in terms of a model of localized diffusion inside a sphere. Only the motions of the DPP hydrogen atoms were considered because of the high sensitivity of neutron scattering to the presence of hydrogen. As atoms far from the attachment point have a greater range of motion than those nearer the tether, the radius of the sphere limiting the motion of individual hydrogen atoms was allowed to increase based on the atom's distance from the tether point Both smaller pore diameters and higher DPP grafting density resulted in larger amplitude motion while the diffusion coefficient was greatest in the largest pores at highest DPP density. These observations support a model where the DPP molecules prefer an orientation allowing close proximity to the MCM-41 pore surface and are forced into the pore interior by either the steric effect of small pore diameter or by increased competition for surface area at high molecule surface coverage

Genotype-Phenotype Correlation Study in a Large Series of Patients Carrying the p.Pro51Ser (p.P51S) Variant in COCH (DFNA9) Part II: A Prospective Cross-Sectional Study of the Vestibular Phenotype in 111 Carriers

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Sequence assembly

Despite the rapidly increasing number of sequenced and re-sequenced genomes, many issues regarding the computational assembly of large-scale sequencing data have remain unresolved. Computational assembly is crucial in large genome projects as well for the evolving high-throughput technologies and plays an important role in processing the information generated by these methods. Here, we provide a comprehensive overview of the current publicly available sequence assembly programs. We describe the basic principles of computational assembly along with the main concerns, such as repetitive sequences in genomic DNA, highly expressed genes and alternative transcripts in EST sequences. We summarize existing comparisons of different assemblers and provide a detailed descriptions and directions for download of assembly programs at: http://genome.ku.dk/resources/assembly/methods.html

Spectral characterisation of analog samples in anticipation of OSIRS-REx's arrival at Bennu: A blind test study

We present spectral measurements of a suite of mineral mixtures and meteorites that are possible analogs for asteroid (101955) Bennu, the target asteroid for NASA's Origins, Spectral Interpretation, Resource Identification, Security, Regolith Explorer (OSIRIS-REx) mission. The sample suite, which includes anhydrous and hydrated mineral mixtures and a suite of chondritic meteorites (CM, CI, CV, CR, and L5), was chosen to characterize the spectral effects due to varying amounts of aqueous alteration and minor amounts of organic material. Our results demonstrate the utility of mineral mixtures for understanding the mixing behavior of meteoritic materials and identifying spectrally dominant species across the visible to near-infrared (VNIR) and thermal infrared (TIR) spectral ranges. Our measurements demonstrate that, even with subtle signatures in the spectra of chondritic meteorites, we can identify diagnostic features related to the minerals comprising each of the samples. Also, the complementary nature of the two spectral ranges regarding their ability to detect different mixture and meteorite components can be used to characterize analog sample compositions better. However, we observe differences in the VNIR and TIR spectra between the mineral mixtures and the meteorites. These differences likely result from (1) differences in the types and physical disposition of constituents in the mixtures versus in meteorites, (2) missing phases observed in meteorites that we did not add to the mixtures, and (3) albedo differences among the samples. In addition to the initial characterization of the analog samples, we will use these spectral measurements to test phase detection and abundance determination algorithms in anticipation of mapping Bennu's surface properties and selecting a sampling site