Middle Atlantic Outer Continental Shelf Environmental Studies Volume II-B: Chemical and Biological Benchmark Studies

The Middle Atlantic Outer Continental Shelf Environmental Studies is comprised of three volumes. Volume I. Executive Summary. Volume IIA, IIB, IIC and IID. Chemical and Biological Benchmark Studies. Volume III. Geologic Studies. This is the second of four sections of the Chemical and Biological Benchmark Studies CHAPTER 5. BOTTOM SEDIMENTS AND SEDIMENTARY FRAMEWORK by Donald .F. Boesch CHAPTER 6. BENTHIC ECOLOGICAL STUDIES: MACROBENTHOS by Donald F. Boesch CHAPTER 7. BENTHIC ECOLOGICAL STUDIES: MEIOBENTHOS by D.J. Hartzband and Donald F. Boesch CHAPTER 8. BENTHIC ECOLOGICAL STUDIES: FORAMINIFERA by Robert L. Ellison Chapters of this report contain the Institutes\u27 Special Reports in Applied Marine Science and Ocean Engineering No.193,194,195,196

Hypoxia in the northern Gulf of Mexico: Does the science support the Plan to Reduce, Mitigate, and Control Hypoxia?

We update and reevaluate the scientific information on the distribution, history, and causes of continental shelf hypoxia that supports the 2001 Action Plan for Reducing, Mitigating, and Controlling Hypoxia in the Northern Gulf of Mexico (Mississippi River/Gulf of Mexico Watershed Nutrient Task Force 2001), incorporating data, publications, and research results produced since the 1999 integrated assessment. The metric of mid-summer hypoxic area on the Louisiana-Texas shelf is an adequate and suitable measure for continued efforts to reduce nutrients loads from the Mississippi River and hypoxia in the northern Gulf of Mexico as outlined in the Action Plan. More frequent measurements of simple metrics (e.g., area and volume) from late spring through late summer would ensure that the metric is representative of the system in any given year and useful in a public discourse of conditions and causes. The long-term data on hypoxia, sources of nutrients, associated biological parameters, and paleoindicators continue to verify and strengthen the relationship between the nitrate-nitrogen load of the Mississippi River, the extent of hypoxia, and changes in the coastal ecosystem (eutrophication and worsening hypoxia). Multiple lines of evidence, some of them representing independent data sources, are consistent with the big picture pattern of increased eutrophication as a result of long-term nutrient increases that result in excess carbon production and accumulation and, ultimately, bottom water hypoxia. The additional findings arising since 1999 strengthen the science supporting the Action Plan that focuses on reducing nutrient loads, primarily nitrogen, through multiple actions to reduce the size of the hypoxic zone in the northern Gulf of Mexico

Exercise efficiency relates with mitochondrial content and function in older adults.

Chronic aerobic exercise has been shown to increase exercise efficiency, thus allowing less energy expenditure for a similar amount of work. The extent to which skeletal muscle mitochondria play a role in this is not fully understood, particularly in an elderly population. The purpose of this study was to determine the relationship of exercise efficiency with mitochondrial content and function. We hypothesized that the greater the mitochondrial content and/or function, the greater would be the efficiencies. Thirty-eight sedentary (S, n = 23, 10F/13M) or athletic (A, n = 15, 6F/9M) older adults (66.8 ± 0.8 years) participated in this cross sectional study. V˙O2peak was measured with a cycle ergometer graded exercise protocol (GXT). Gross efficiency (GE, %) and net efficiency (NE, %) were estimated during a 1-h submaximal test (55% V˙O2peak). Delta efficiency (DE, %) was calculated from the GXT. Mitochondrial function was measured as ATPmax (mmol/L/s) during a PCr recovery protocol with (31)P-MR spectroscopy. Muscle biopsies were acquired for determination of mitochondrial volume density (MitoVd, %). Efficiencies were 17% (GE), 14% (NE), and 16% (DE) higher in A than S. MitoVD was 29% higher in A and ATPmax was 24% higher in A than in S. All efficiencies positively correlated with both ATPmax and MitoVd. Chronically trained older individuals had greater mitochondrial content and function, as well as greater exercise efficiencies. GE, NE, and DE were related to both mitochondrial content and function. This suggests a possible role of mitochondria in improving exercise efficiency in elderly athletic populations and allowing conservation of energy at moderate workloads

Characterizing model errors in chemical transport modeling of methane: using GOSAT XCH4_{4} data with weak-constraint four-dimensional variational data assimilation

We examined biases in the global GEOS-Chem chemical transport model for the period of February–May 2010 using weak-constraint (WC) four-dimensional variational (4D-Var) data assimilation and dry-air mole fractions of CH$_{4}$ (XCH$_{4}$) from the Greenhouse gases Observing SATellite (GOSAT). The ability of the observations and the WC 4D-Var method to mitigate model errors in CH$_{4}$ concentrations was first investigated in a set of observing system simulation experiments (OSSEs). We then assimilated the GOSAT XCH$_{4}$ retrievals and found that they were capable of providing information on the vertical structure of model errors and of removing a significant portion of biases in the modeled CH$_{4}$ state. In the WC 4D-Var assimilation, corrections were added to the modeled CH$_{4}$ state at each model time step to account for model errors and improve the model fit to the assimilated observations. Compared to the conventional strong-constraint (SC) 4D-Var assimilation, the WC method was able to significantly improve the model fit to independent observations. Examination of the WC state corrections suggested that a significant source of model errors was associated with discrepancies in the model CH$_{4}$ in the stratosphere. The WC state corrections also suggested that the model vertical transport in the troposphere at middle and high latitudes is too weak. The problem was traced back to biases in the uplift of CH$_{4}$ over the source regions in eastern China and North America. In the tropics, the WC assimilation pointed to the possibility of biased CH$_{4}$ outflow from the African continent to the Atlantic in the mid-troposphere. The WC assimilation in this region would greatly benefit from glint observations over the ocean to provide additional constraints on the vertical structure of the model errors in the tropics. We also compared the WC assimilation at 4° × 5° and 2° × 2.5° horizontal resolutions and found that the WC corrections to mitigate the model errors were significantly larger at 4° × 5° than at 2° × 2.5° resolution, indicating the presence of resolution-dependent model errors. Our results illustrate the potential utility of the WC 4D-Var approach for characterizing model errors. However, a major limitation of this approach is the need to better characterize the specified model error covariance in the assimilation scheme

The Greenhouse Gas Climate Change Initiative (GHG-CCI): comparative validation of GHG-CCI SCIAMACHY/ENVISAT and TANSO-FTS/GOSAT CO₂ and CH₄ retrieval algorithm products with measurements from the TCCON

Column-averaged dry-air mole fractions of carbon dioxide and methane have been retrieved from spectra acquired by the TANSO-FTS (Thermal And Near-infrared Sensor for carbon Observations-Fourier Transform Spectrometer) and SCIAMACHY (Scanning Imaging Absorption Spectrometer for Atmospheric Cartography) instruments on board GOSAT (Greenhouse gases Observing SATellite) and ENVISAT (ENVIronmental SATellite), respectively, using a range of European retrieval algorithms. These retrievals have been compared with data from ground-based high-resolution Fourier transform spectrometers (FTSs) from the Total Carbon Column Observing Network (TCCON). The participating algorithms are the weighting function modified differential optical absorption spectroscopy (DOAS) algorithm (WFMD, University of Bremen), the Bremen optimal estimation DOAS algorithm (BESD, University of Bremen), the iterative maximum a posteriori DOAS (IMAP, Jet Propulsion Laboratory (JPL) and Netherlands Institute for Space Research algorithm (SRON)), the proxy and full-physics versions of SRON's RemoTeC algorithm (SRPR and SRFP, respectively) and the proxy and full-physics versions of the University of Leicester's adaptation of the OCO (Orbiting Carbon Observatory) algorithm (OCPR and OCFP, respectively). The goal of this algorithm inter-comparison was to identify strengths and weaknesses of the various so-called round- robin data sets generated with the various algorithms so as to determine which of the competing algorithms would proceed to the next round of the European Space Agency's (ESA) Greenhouse Gas Climate Change Initiative (GHG-CCI) project, which is the generation of the so-called Climate Research Data Package (CRDP), which is the first version of the Essential Climate Variable (ECV) "greenhouse gases" (GHGs). For XCO₂, all algorithms reach the precision requirements for inverse modelling (< 8 ppm), with only WFMD having a lower precision (4.7 ppm) than the other algorithm products (2.4–2.5 ppm). When looking at the seasonal relative accuracy (SRA, variability of the bias in space and time), none of the algorithms have reached the demanding < 0.5 ppm threshold. For XCH₄, the precision for both SCIAMACHY products (50.2 ppb for IMAP and 76.4 ppb for WFMD) fails to meet the < 34 ppb threshold for inverse modelling, but note that this work focusses on the period after the 2005 SCIAMACHY detector degradation. The GOSAT XCH₄ precision ranges between 18.1 and 14.0 ppb. Looking at the SRA, all GOSAT algorithm products reach the < 10 ppm threshold (values ranging between 5.4 and 6.2 ppb). For SCIAMACHY, IMAP and WFMD have a SRA of 17.2 and 10.5 ppb, respectively

Modelling the potential impacts of climate change on the distribution of ichthyoplankton in the Yangtze Estuary, China

Aim Species distribution models (SDMs) are an effective tool to explore the potential distribution of terrestrial, freshwater and marine organisms; however, SDMs have been seldom used to model ichthyoplankton distributions, and thus, our understanding of how larval stages of fishes will respond to climate change is still limited. Here, we developed SDMs to explore potential impacts of climate change on habitat suitability of ichthyoplankton. Location Yangtze Estuary, China. Methods Using long-term ichthyoplankton survey data and a large set of marine predictor variables, we developed ensemble SDMs for five abundant ichthyoplankton species in the Yangtze Estuary (Coilia mystus, Hypoatherina valenciennei, Larimichthys polyactis, Salanx ariakensis and Chelidonichthys spinosus). Then, we projected their habitat suitability under present and future climate conditions. Results The ensemble SDMs had good predictive performance and were successful in estimating the known distributions of the five species. Model projections highlighted two contrasting patterns of response to future climates: while C. mystus will likely expand its range, the ranges of the other four species will likely contract and shift northward. Main conclusions According to our SDM projections, the five ichthyoplankton species that we tested in the Yangtze Estuary are likely to respond differently to future climate changes. These projected different responses seemingly reflect the differential functional attributes and life-history strategies of these species. To the extent that climate change emerges as a critical driver of the future distribution of these species, our findings provide an important roadmap for designing future conservation strategies for ichthyoplankton in this region.Peer reviewe

On the existence of internal modes of sine-Gordon kinks

We study whether or not sine-Gordon kinks exhibit internal modes or ``quasimodes.'' By considering the response of the kinks to ac forces and initial distortions, we show that neither intrinsic internal modes nor ``quasimodes'' exist in contrast to previous reports. However, we do identify a different kind of internal mode bifurcating from the bottom edge of the phonon band which arises from the discretization of the system in the numerical simulations, thus confirming recent predictions.Comment: 4 pages, 2 figures, REVTeX, to appear as a Rapid Communication in Phys Rev E (July 1st

First GIS analysis of modern stone tools used by wild chimpanzees (Pan troglodytes verus) in Bossou, Guinea, West Africa

Stone tool use by wild chimpanzees of West Africa offers a unique opportunity to explore the evolutionary roots of technology during human evolution. However, detailed analyses of chimpanzee stone artifacts are still lacking, thus precluding a comparison with the earliest archaeological record. This paper presents the first systematic study of stone tools used by wild chimpanzees to crack open nuts in Bossou (Guinea-Conakry), and applies pioneering analytical techniques to such artifacts. Automatic morphometric GIS classification enabled to create maps of use wear over the stone tools (anvils, hammers, and hammers/anvils), which were blind tested with GIS spatial analysis of damage patterns identified visually. Our analysis shows that chimpanzee stone tool use wear can be systematized and specific damage patterns discerned, allowing to discriminate between active and passive pounders in lithic assemblages. In summary, our results demonstrate the heuristic potential of combined suites of GIS techniques for the analysis of battered artifacts, and have enabled creating a referential framework of analysis in which wild chimpanzee battered tools can for the first time be directly compared to the early archaeological record.Leverhulme Trust [IN-052]; MEXT [20002001, 24000001]; JSPS-U04-PWS; FCT-Portugal [SFRH/BD/36169/2007]; Wenner-Gren Foundation for Anthropological Researc

The plight of the sense-making ape

This is a selective review of the published literature on object-choice tasks, where participants use directional cues to find hidden objects. This literature comprises the efforts of researchers to make sense of the sense-making capacities of our nearest living relatives. This chapter is written to highlight some nonsensical conclusions that frequently emerge from this research. The data suggest that when apes are given approximately the same sense-making opportunities as we provide our children, then they will easily make sense of our social signals. The ubiquity of nonsensical contemporary scientific claims to the effect that humans are essentially--or inherently--more capable than other great apes in the understanding of simple directional cues is, itself, a testament to the power of preconceived ideas on human perception