CO ro-vibrational lines in HD100546: A search for disc asymmetries and the role of fluorescence

We have studied the emission of CO ro-vibrational lines in the disc around the Herbig Be star HD100546 with the final goal of using these lines as a diagnostic to understand inner disc structure in the context of planet formation. High-resolution IR spectra of CO ro-vibrational emission at eight different position angles were taken with CRIRES at the VLT. From these spectra flux tables, CO ro-vibrational line profiles, and population diagrams were produced. We have investigated variations in the line profile shapes and line strengths as a function of slit position angle. We used the thermochemical disc modelling code ProDiMo based on the chemistry, radiation field, and temperature structure of a previously published model for HD100546. Comparing observations and the model, we investigated the possibility of disc asymmetries, the excitation mechanism (UV fluorescence), the geometry, and physical conditions of the inner disc. The observed CO ro-vibrational lines are largely emitted from the inner rim of the outer disc at 10-13 AU. The line shapes are similar for all v levels and line fluxes from all vibrational levels vary only within one order of magnitude. All line profile asymmetries and variations can be explained with a symmetric disc model to which a slit correction and pointing offset is applied. Because the angular size of the CO emitting region (10-13 AU) and the slit width are comparable the line profiles are very sensitive to the placing of the slit. The model reproduces the line shapes and the fluxes of the v=1-0 lines as well as the spatial extent of the CO ro-vibrational emission. It does not reproduce the observed band ratios of 0.5-0.2 with higher vibrational bands. We find that lower gas volume densities at the surface of the inner rim of the outer disc can make the fluorescence pumping more effcient and reproduce the observed band ratios.Comment: 20 pages, 21 figure

Regional Characterisation of Hard-Bottom Nursery Habitat for Juvenile Caribbean Spiny Lobster (Panulirus argus) Using Rapid Assessment Techniques

Shallow, hard-bottom habitat constitutes approximately 30% of the coastal waters of south Florida, United States, yet it is a chronically understudied feature of the marine seascape in this region. In this study, we characterised the general biogeographic and structural features of shallow benthic hard-bottom communities in the Florida Keys, and related those to the abundance of juvenile Caribbean spiny lobster (Panulirus argus), the target of one of Florida\u27s most economically valuable fisheries. We used rapid assessment techniques to survey more than 100 hard-bottom sites in the Florida Keys to estimate the percentage bottom coverage of vegetation (seagrass and macroalgae) and the abundance of sponges, octocorals, hard corals, and other crevice-bearing structures, as well as the abundance of juvenile lobsters. Using a multivariate statistical approach, we evaluated the relationship between habitat and size-specific juvenile lobster abundance and quantitatively verified the existence of six generally accepted biogeographic subregions. Although the types of hard-bottom shelters used by juvenile lobsters varied somewhat among these subregions, in all regions, branching-candle sponges and octocorals were under-used by lobsters, whereas loggerhead sponges, coral heads, and solution holes were over-used (i.e., used more frequently than expected based on their availability). There was also an ontogenetic transition in the shelter preference of juvenile lobsters; small juveniles tended to occupy a variety of sponges, whereas large juveniles preferred hard structures such as coral heads and solution holes. This study yields the first quantitative biogeographic description of hard-bottom communities of the Florida Keys, and confirms the suspected relationship between the structural features of hard-bottom habitat and the value of these communities as nurseries for juvenile spiny lobster

Aquatic Bird Bornavirus 1 in Wild Geese, Denmark

To investigate aquatic bird bornavirus 1 in Europe, we examined 333 brains from hunter-killed geese in Denmark in 2014. Seven samples were positive by reverse transcription PCR and were 98.2%–99.8% identical; they were also 97.4%–98.1% identical to reference strains of aquatic bird bornavirus 1 from geese in North America

Further evidence of Chelonid herpesvirus 5 (ChHV5) latency : High levels of ChHV5 DNA detected in clinically healthy marine turtles

The Chelonid herpesvirus 5 (ChHV5) has been consistently associated with fibropapillomatosis (FP), a transmissible neoplastic disease of marine turtles. Whether ChHV5 plays a causal role remains debated, partly because while FP tumours have been clearly documented to contain high concentrations of ChHV5 DNA, recent PCRbased studies have demonstrated that large proportions of asymptomatic marine turtles are also carriers of ChHV5. We used a real-time PCR assay to quantify the levels of ChHV5 Glycoprotein B (gB) DNA in both tumour and non-tumour skin tissues, from clinically affected and healthy turtles drawn from distant ocean basins across four species. In agreement with previous studies, higher ratios of viral to host DNA were consistently observed in tumour versus non-tumour tissues in turtles with FP. Unexpectedly however, the levels of ChHV5 gB DNA in clinically healthy turtles were significantly higher than in non-tumour tissues from FP positive turtles. Thus, a large proportion of clinically healthy sea turtle populations worldwide across species carry ChHV5 gB DNA presumably through persistent latent infections. ChHV5 appears to be ubiquitous regardless of the animals' clinical conditions. Hence, these results support the theory that ChHV5 is a near ubiquitous virus with latency characteristics requiring co-factors, possibly environmental or immune related, to induce FP

The impact of vatinoxan on medetomidine-ketamine-midazolam immobilization in Patagonian maras (Dolichotis patagonum)

Objective To compare cardiovascular and ventilatory effects, immobilization quality and effects on tissue perfusion of a medetomidine-ketamine-midazolam combination with or without vatinoxan (MK-467), a peripherally acting alpha(2)-adrenoceptor antagonist. Study design Randomized, blinded, crossover study. Animals A group of nine healthy Patagonian maras (Dolichotis patagonum). Methods Maras were immobilized twice with: 1) medetomidine hydrochloride (0.1 mg kg(-1)) + ketamine (5 mg kg(-1)) + midazolam (0.1 mg kg(-1)) (MKM) + saline or 2) MKM + vatinoxan hydrochloride (0.8 mg kg(-1)), administered intramuscularly. Drugs were mixed in the same syringe. At 20, 30 and 40 minutes after injection, invasive blood pressure, heart rate, respiration rate, end-tidal CO2, haemoglobin oxygen saturation, and muscle oxygenation were measured, arteriovenous oxygen content difference was calculated. Muscle tone, jaw tone, spontaneous blinking and palpebral reflex were evaluated. Times to initial effect, recumbency, initial arousal and control of the head were recorded. Paired t test, Wilcoxon matched-pairs signed rank test and analysis of variance were used to compare protocols; (p 120 mmHg), whereas with 372 vatinoxan, four animals were hypotensive (MAP <60 mmHg). Muscle and jaw tone were significantly more frequently present with MKM (both p = 0.039). Other measurements did not significantly differ between protocols. Conclusions and clinical relevance In Patagonian maras, vatinoxan attenuated the increase in blood pressure induced by medetomidine. Muscle and jaw tone were more frequently present with MKM, indicating that quality of immobilization with vatinoxan was more profound.Peer reviewe

Level curvature distribution in a model of two uncoupled chaotic subsystems

We study distributions of eigenvalue curvatures for a block diagonal random matrix perturbed by a full random matrix. The most natural physical realization of this model is a quantum chaotic system with some inherent symmetry, such that its energy levels form two independent subsequences, subject to a generic perturbation which does not respect the symmetry. We describe analytically a crossover in the form of a curvature distribution with a tunable parameter namely the ratio of inter/intra subsystem coupling strengths. We find that the peak value of the curvature distribution is much more sensitive to the changes in this parameter than the power law tail behaviour. This observation may help to clarify some qualitative features of the curvature distributions observed experimentally in acoustic resonances of quartz blocks