The Three-dimensional Evolution of Rising, Twisted Magnetic Flux Tubes in a Gravitationally Stratified Model Convection Zone

We present three-dimensional numerical simulations of the rise and fragmentation of twisted, initially horizontal magnetic flux tubes which evolve into emerging Omega-loops. The flux tubes rise buoyantly through an adiabatically stratified plasma that represents the solar convection zone. The MHD equations are solved in the anelastic approximation, and the results are compared with studies of flux tube fragmentation in two dimensions. We find that if the initial amount of field line twist is below a critical value, the degree of fragmentation at the apex of a rising Omega-loop depends on its three-dimensional geometry: the greater the apex curvature of a given Omega-loop, the lesser the degree of fragmentation of the loop as it approaches the photosphere. Thus, the amount of initial twist necessary for the loop to retain its cohesion can be reduced substantially from the two-dimensional limit. The simulations also suggest that as a fragmented flux tube emerges through a relatively quiet portion of the solar disk, extended crescent-shaped magnetic features of opposite polarity should form and steadily recede from one another. These features eventually coalesce after the fragmented portion of the Omega-loop emerges through the photosphere.Comment: 17 pages, 17 figures, uses AAS LaTeX macros v5.0. ApJ, in pres

Estimating Electric Fields from Vector Magnetogram Sequences

Determining the electric field (E-field) distribution on the Sun's photosphere is essential for quantitative studies of how energy flows from the Sun's photosphere, through the corona, and into the heliosphere. This E-field also provides valuable input for data-driven models of the solar atmosphere and the Sun-Earth system. We show how Faraday's Law can be used with observed vector magnetogram time series to estimate the photospheric E-field, an ill-posed inversion problem. Our method uses a "poloidal-toroidal decomposition" (PTD) of the time derivative of the vector magnetic field. The PTD solutions are not unique; the gradient of a scalar potential can be added to the PTD E-field without affecting consistency with Faraday's Law. We present an iterative technique to determine a potential function consistent with ideal MHD evolution; but this E-field is also not a unique solution to Faraday's Law. Finally, we explore a variational approach that minimizes an energy functional to determine a unique E-field, similar to Longcope's "Minimum Energy Fit". The PTD technique, the iterative technique, and the variational technique are used to estimate E-fields from a pair of synthetic vector magnetograms taken from an MHD simulation; and these E-fields are compared with the simulation's known electric fields. These three techniques are then applied to a pair of vector magnetograms of solar active region NOAA AR8210, to demonstrate the methods with real data.Comment: 41 pages, 10 figure

Simulation of Flux Emergence from the Convection Zone to the Corona

Here, we present numerical simulations of magnetic flux buoyantly rising from a granular convection zone into the low corona. We study the complex interaction of the magnetic field with the turbulent plasma. The model includes the radiative loss terms, non-ideal equations of state, and empirical corona heating. We find that the convection plays a crucial role in shaping the morphology and evolution of the emerging structure. The emergence of magnetic fields can disrupt the convection pattern as the field strength increases, and form an ephemeral region-like structure, while weak magnetic flux emerges and quickly becomes concentrated in the intergranular lanes, i.e. downflow regions. As the flux rises, a coherent shear pattern in the low corona is observed in the simulation. In the photosphere, both magnetic shearing and velocity shearing occur at a very sharp polarity inversion line (PIL). In a case of U-loop magnetic field structure, the field above the surface is highly sheared while below it is relaxed

Convective Dynamos and the Minimum X-ray Flux in Main Sequence Stars

The objective of this paper is to investigate whether a convective dynamo can account quantitatively for the observed lower limit of X-ray surface flux in solar-type main sequence stars. Our approach is to use 3D numerical simulations of a turbulent dynamo driven by convection to characterize the dynamic behavior, magnetic field strengths, and filling factors in a non-rotating stratified medium, and to predict these magnetic properties at the surface of cool stars. We use simple applications of stellar structure theory for the convective envelopes of main-sequence stars to scale our simulations to the outer layers of stars in the F0--M0 spectral range, which allows us to estimate the unsigned magnetic flux on the surface of non-rotating reference stars. With these estimates we use the recent results of \citet{Pevtsov03} to predict the level of X-ray emission from such a turbulent dynamo, and find that our results compare well with observed lower limits of surface X-ray flux. If we scale our predicted X-ray fluxes to \ion{Mg}{2} fluxes we also find good agreement with the observed lower limit of chromospheric emission in K dwarfs. This suggests that dynamo action from a convecting, non-rotating plasma is a viable alternative to acoustic heating models as an explanation for the basal emission level seen in chromospheric, transition region, and coronal diagnostics from late-type stars.Comment: ApJ, accepted, 30 pages with 7 figure

Maternal Weaning Modulates Emotional Behavior and Regulates the Gut-Brain Axis.

Evidence shows that nutritional and environmental stress stimuli during postnatal period influence brain development and interactions between gut and brain. In this study we show that in rats, prevention of weaning from maternal milk results in depressive-like behavior, which is accompanied by changes in the gut bacteria and host metabolism. Depressive-like behavior was studied using the forced-swim test on postnatal day (PND) 25 in rats either weaned on PND 21, or left with their mother until PND 25 (non-weaned). Non-weaned rats showed an increased immobility time consistent with a depressive phenotype. Fluorescence in situ hybridization showed non-weaned rats to harbor significantly lowered Clostridium histolyticum bacterial groups but exhibit marked stress-induced increases. Metabonomic analysis of urine from these animals revealed significant differences in the metabolic profiles, with biochemical phenotypes indicative of depression in the non-weaned animals. In addition, non-weaned rats showed resistance to stress-induced modulation of oxytocin receptors in amygdala nuclei, which is indicative of passive stress-coping mechanism. We conclude that delaying weaning results in alterations to the gut microbiota and global metabolic profiles which may contribute to a depressive phenotype and raise the issue that mood disorders at early developmental ages may reflect interplay between mammalian host and resident bacteria

Gut microbiota modulation accounts for the neuroprotective properties of anthocyanins

High-fat (HF) diets are thought to disrupt the profile of the gut microbiota in a manner that may contribute to the neuroinflammation and neurobehavioral changes observed in obesity. Accordingly, we hypothesize that by preventing HF-diet induced dysbiosis it is possible to prevent neuroinflammation and the consequent neurological disorders. Anthocyanins are flavonoids found in berries that exhibit anti-neuroinflammatory properties in the context of obesity. Here, we demonstrate that the blackberry anthocyanin-rich extract (BE) can modulate gut microbiota composition and counteract some of the features of HF-diet induced dysbiosis. In addition, we show that the modifications in gut microbial environment are partially linked with the anti-neuroinflammatory properties of BE. Through fecal metabolome analysis, we unravel the mechanism by which BE participates in the bilateral communication between the gut and the brain. BE alters host tryptophan metabolism, increasing the production of the neuroprotective metabolite kynurenic acid. These findings strongly suggest that dietary manipulation of the gut microbiota with anthocyanins can attenuate the neurologic complications of obesity, thus expanding the classification of psychobiotics to anthocyanins

Overweight and constipation in adolescents

Background: the association between overweight and gastrointestinal symptoms has been recently studied in the literature; however, few studies have evaluated the association between overweight and constipation in adolescents in a community-based sample. the aim of this study was to analyze the prevalence of constipation and its association with being overweight in a community-based survey with adolescents.Methods: This cross-sectional study included 1,077 adolescents who were enrolled in five schools in the city of Sao Jose dos Campos, Brazil. Constipation was defined according to modified and combined Rome III criteria for adolescents and adults. Being overweight was defined as a body mass index (BMI) that was equal to or greater than that of the 85(th) percentile for age and gender.Results: Constipation was diagnosed in 18.2% (196/1077) of the included adolescents. There was no significant difference in the prevalence of constipation in males and females who were both younger and older than 14 years. Fecal incontinence was observed in 25 adolescents, 22 (88.0%) of whom were diagnosed as being constipated. the prevalence of being overweight was found in 13.5% (145/1077) of the study population. the prevalence of constipation was observed to be similar in adolescents who were (19.4%; 28/144) and were not (18.0%; 168/933) overweight (p = 0.764; OR = 1.10). Fecal incontinence that was associated with constipation was more frequent in adolescents who were overweight (37.0%; 8/28) than in adolescents who were not overweight (8.5%; 14/168; p = 0.005; OR = 4.40).Conclusions: the prevalence of constipation was high among the investigated adolescents. There was no association between being overweight and constipation; however, an association between being overweight and fecal incontinence in constipated adolescents was confirmed.Universidade Federal de São Paulo, Div Pediat Gastroenterol, Escola Paulista Med, São Paulo, BrazilUniversidade Federal de São Paulo, Div Pediat Gastroenterol, Escola Paulista Med, São Paulo, BrazilWeb of Scienc

Probiotic Bifidobacterium longum NCC3001 Reduces Depression Scores and Alters Brain Activity: a Pilot Study in Patients With Irritable Bowel Syndrome

Background & Aims: Probiotics can reduce symptoms of irritable bowel syndrome (IBS), but little is known about their effects on psychiatric comorbidities. We performed a prospective study to evaluate the effects of Bifidobacterium longum NCC3001 (BL) on anxiety and depression in patients with IBS. Methods: We performed a randomized, double-blind, placebo-controlled study of 44 adults with IBS and diarrhea or a mixed-stool pattern (based on Rome III criteria) and mild to moderate anxiety and/or depression (based on the Hospital Anxiety and Depression scale) at McMaster University in Canada, from March 2011 to May 2014. At the screening visit, clinical history and symptoms were assessed and blood samples were collected. Patients were then randomly assigned to groups and given daily BL (n = 22) or placebo (n = 22) for 6 weeks. At weeks 0, 6, and 10, we determined patients’ levels of anxiety and depression, IBS symptoms, quality of life, and somatization using validated questionnaires. At weeks 0 and 6, stool, urine and blood samples were collected, and functional magnetic resonance imaging (fMRI) test was performed. We assessed brain activation patterns, fecal microbiota, urine metabolome profiles, serum markers of inflammation, neurotransmitters, and neurotrophin levels. Results: At week 6, 14 of 22 patients in the BL group had reduction in depression scores of 2 points or more on the Hospital Anxiety and Depression scale, vs 7 of 22 patients in the placebo group (P = .04). BL had no significant effect on anxiety or IBS symptoms. Patients in the BL group had a mean increase in quality of life score compared with the placebo group. The fMRI analysis showed that BL reduced responses to negative emotional stimuli in multiple brain areas, including amygdala and fronto-limbic regions, compared with placebo. The groups had similar fecal microbiota profiles, serum markers of inflammation, and levels of neurotrophins and neurotransmitters, but the BL group had reduced urine levels of methylamines and aromatic amino acids metabolites. At week 10, depression scores were reduced in patients given BL vs placebo. Conclusion: In a placebo-controlled trial, we found that the probiotic BL reduces depression but not anxiety scores and increases quality of life in patients with IBS. These improvements were associated with changes in brain activation patterns that indicate that this probiotic reduces limbic reactivity. ClinicalTrials.gov no. NCT01276626