Assessing the repeatability of automated seafloor classification algorithms, with application in marine protected area monitoring

The number and areal extent of marine protected areas worldwide is rapidly increasing as a result of numerous national targets that aim to see up to 30% of their waters protected by 2030. Automated seabed classification algorithms are arising as faster and objective methods to generate benthic habitat maps to monitor these areas. However, no study has yet systematically compared their repeatability. Here we aim to address that problem by comparing the repeatability of maps derived from acoustic datasets collected on consecutive days using three automated seafloor classification algorithms: (1) Random Forest (RF), (2) K–Nearest Neighbour (KNN) and (3) K means (KMEANS). The most robust and repeatable approach is then used to evaluate the change in seafloor habitats between 2012 and 2015 within the Greater Haig Fras Marine Conservation Zone, Celtic Sea, UK. Our results demonstrate that only RF and KNN provide statistically repeatable maps, with 60.3% and 47.2% agreement between consecutive days. Additionally, this study suggests that in low-relief areas, bathymetric derivatives are non-essential input parameters, while backscatter textural features, in particular Grey Level Co-occurrence Matrices, are substantially more effective in the detection of different habitats. Habitat persistence in the test area between 2012 and 2015 was 48.8%, with swapping of habitats driving the changes in 38.2% of the area. Overall, this study highlights the importance of investigating the repeatability of automated seafloor classification methods before they can be fully used in the monitoring of benthic habitat

A generalised volumetric method to estimate the biomass of photographically surveyed benthic megafauna

Biomass is a key variable for understanding the stocks and flows of carbon and energy in the environment. The quantification of megabenthos biomass (body size ≥ 1 cm) has been limited by their relatively low abundance and the difficulties associated with quantitative sampling. Developments in robotic technology, particularly autonomous underwater vehicles, offer an enhanced opportunity for the quantitative photographic assessment of the megabenthos. Photographic estimation of biomass has typically been undertaken using taxon-specific length-weight relationships (LWRs) derived from physical specimens. This is problematic where little or no physical sampling has occurred and/or where key taxa are not easily sampled. We present a generalised volumetric method (GVM) for the estimation of biovolume as a predictor of biomass. We validated the method using fresh trawl-caught specimens from the Porcupine Abyssal Plain Sustained Observatory (northeast Atlantic), and we demonstrated that the GVM has a higher predictive capability and a lower standard error of estimation than the LWR method. GVM and LWR approaches were tested in parallel on a photographic survey in the Celtic Sea. Among the 75% of taxa for which LWR estimation was possible, highly comparable biomass values and distribution patterns were determined by both methods. The biovolume of the remaining 25% of taxa increased the total estimated standing stock by a factor of 1.6. Additionally, we tested inter-operator variability in the application of the GVM, and we detected no statistically significant bias. We recommend the use of the GVM where LWRs are not available, and more generally given its improved predictive capability and its independence from the taxonomic, temporal, and spatial, dependencies known to impact LWRs

Integrating ocean observations across body‐size classes to deliver benthic invertebrate abundance and distribution information

Invertebrate animals living at the seafloor make up a prominent component of life globally, spanning 10 orders of magnitude in body size over 71% of Earth's surface. However, integrating information across sizes and sampling methodologies has limited our understanding of the influence of natural variation, climate change and human activity. Here, we outline maturing practices that can underpin both the feasibility and impact of establishing Benthic Invertebrate Abundance and Distribution as a Global Ocean Observing System—Essential Ocean Variable, including: (1) quantifying individual body size, (2) identifying the well-quantified portions of sampled body-size spectra, (3) taking advantage of (semi-)automated information processing, (4) application of metadata standards such as Darwin Core, and (5) making data available through internationally recognized access points. These practices enable broader-scale analysis supporting research and sustainable development, such as assessments of indicator taxa, biodiversity, biomass, and the modeling of carbon stocks and flows that are contiguous over time and space

Monitoring mosaic biotopes in a marine conservation zone by autonomous underwater vehicle

The number of marine protected areas (MPAs) has increased dramatically in the last decade and poses a major logistic challenge for conservation practitioners in terms of spatial extent and the multiplicity of habitats and biotopes that now require assessment. Photographic assessment by autonomous underwater vehicle (AUV) enables the consistent description of multiple habitats, in our case including mosaics of rock and sediment. As a case study, we used this method to survey the Greater Haig Fras marine conservation zone (Celtic Sea, northeast Atlantic). We distinguished 7 biotopes, detected statistically significant variations in standing stocks, species density, species diversity, and faunal composition, and identified significant indicator species for each habitat. Our results demonstrate that AUV‐based photography can produce robust data for ecological research and practical marine conservation. Standardizing to a minimum number of individuals per sampling unit, rather than to a fixed seafloor area, may be a valuable means of defining an ecologically appropriate sampling unit. Although composite sampling represents a change in standard practice, other users should consider the potential benefits of this approach in conservation studies. It is broadly applicable in the marine environment and has been successfully implemented in deep‐sea conservation and environmental impact studies. Without a cost‐effective method, applicable across habitats, it will be difficult to further a coherent classification of biotopes or to routinely assess their conservation status in the rapidly expanding global extent of MPAs