Engineered MATE multidrug transporters reveal two functionally distinct ion-coupling pathways in NorM from Vibrio cholerae.

Multidrug and toxic compound extrusion (MATE) transport proteins confer multidrug resistance on pathogenic microorganisms and affect pharmacokinetics in mammals. Our understanding of how MATE transporters work, has mostly relied on protein structures and MD simulations. However, the energetics of drug transport has not been studied in detail. Many MATE transporters utilise the electrochemical H+ or Na+ gradient to drive substrate efflux, but NorM-VC from Vibrio cholerae can utilise both forms of metabolic energy. To dissect the localisation and organisation of H+ and Na+ translocation pathways in NorM-VC we engineered chimaeric proteins in which the N-lobe of H+-coupled NorM-PS from Pseudomonas stutzeri is fused to the C-lobe of NorM-VC, and vice versa. Our findings in drug binding and transport experiments with chimaeric, mutant and wildtype transporters highlight the versatile nature of energy coupling in NorM-VC, which enables adaptation to fluctuating salinity levels in the natural habitat of V. cholerae

Advances in Strain Improvement for the Production of ε-Poly-L-lysine

ε-Poly-L-lysine (ε-PL) is a novel biopolymer consisting of 25–35 L-lysine residues, which is formed by the dehydration condensation of ε-NH2 and α-COOH. ε-PL possesses many excellent characteristics, such as antimicrobial activity, edibility, water solubility, biodegradability, thermostability and nontoxicity. As a natural and safe food preservative, ε-PL possesses many excellent advantages such as thermal stability, edibility, water solubility, degradability, and broad-spectrum antibacterial activity and has been successfully utilized in Japan, South Korea, the United States, China and other countries. ε-PL is usually produced by fermentation with Streptomyces albulus, and improving ε-PL-producing stains is crucial for enhancing ε-PL production and reducing costs. At present, researchers have obtained microbial strains capable of producing high levels of ε-PL by using physicochemical mutagenesis, ribosome engineering, genome shuffling, genetic engineering and other methods. This review introduces the mechanism of ε-PL biosynthesis and recent progress in strain improvement for the production of ε-PL, and gives an overview of the fermentation process of ε-PL. Finally, this review concludes with an outlook on future research directions. We hope that this review can help promote strain improvement for green biological manufacturing of ε-poly-L-lysine

Rational Expectations Models with Higher Order Beliefs,” mimeo

Abstract This paper develops a general method of solving rational expectations models with higher order beliefs. Higher order beliefs are crucial in an environment with dispersed information and strategic complementarity, and the equilibrium policy depends on infinite higher order beliefs. It is generally believed that solving this type of equilibrium policy requires an infinite number of state variable

Rational Expectations Models with Higher Order Beliefs,” mimeo

Abstract This paper develops a general method of solving rational expectations models with higher order beliefs. Higher order beliefs are crucial in an environment with dispersed information and strategic complementarity, and the equilibrium policy depends on infinite higher order beliefs. It is generally believed that solving this type of equilibrium policy requires an infinite number of state variable

Assessing Physical Activity in People With Mental Illness: 23-country Reliability and Validity of the Simple Physical Activity Questionnaire (SIMPAQ)

Background: Physical inactivity is a key contributor to the global burden of disease and disproportionately impacts the wellbeing of people experiencing mental illness. Increases in physical activity are associated with improvements in symptoms of mental illness and reduction in cardiometabolic risk. Reliable and valid clinical tools that assess physical activity would improve evaluation of intervention studies that aim to increase physical activity and reduce sedentary behaviour in people living with mental illness. Methods: The five-item Simple Physical Activity Questionnaire (SIMPAQ) was developed by a multidisciplinary, international working group as a clinical tool to assess physical activity and sedentary behaviour in people living with mental illness. Patients with a DSM or ICD mental illness diagnoses were recruited and completed the SIMPAQ on two occasions, one week apart. Participants wore an Actigraph accelerometer and completed brief cognitive and clinical assessments. Results: Evidence of SIMPAQ validity was assessed against accelerometer-derived measures of physical activity. Data were obtained from 1010 participants. The SIMPAQ had good test-retest reliability. Correlations for moderate-vigorous physical activity was comparable to studies conducted in general population samples. Evidence of validity for the sedentary behaviour item was poor. An alternative method to calculate sedentary behaviour had stronger evidence of validity. This alternative method is recommended for use in future studies employing the SIMPAQ. Conclusions: The SIMPAQ is a brief measure of physical activity and sedentary behaviour that can be reliably and validly administered by health professionals.Universidad Pablo de Olavide de Sevilla. Departamento de Deporte e Informátic

Fluorescence Spectroscopy and 13C NMR Spectroscopy Characteristics of HA in Black Soil at Different Corn Straw Returning Modes

A three-year field experiment was conducted to analyze the effects of straw enrichment and deep incorporation on the humus composition and the structure of humic acid (HA) in black soil. The differences in the HA structure between different straw returning methods were detected by three-dimensional fluorescence spectroscopy and 13C NMR technology. The purpose of this paper is to provide a theoretical basis and data support for improving the straw returning system. Four different treatments, including no straw applied (CK), straw mulching (SCR), straw deep ploughing (MBR), and straw enrichment and deep incorporation (SEDI: harvested the corn straw from four rows together with a finger-plate rake and then crushed and buried them in one row in the 20∼40 cm deep level in the subsoil with a wind-driven input cylindrical plough), were used in this study. Our results showed that compared to CK treatment, SEDI significantly increased the contents of organic carbon (SOC), soil humic acid carbon (HAC), fulvic acid carbon (FAC), and humin C content (HM-C) in the subsurface soil layer by 27.47%, 34.33%, 19.66%, and 31.49%, respectively. Among all the straw returning treatments, SEDI treatment had the most significant effect in increasing the contents of HEC, HAC, and FAC. Straw returning not only reduced the degree of condensation and oxidation of the HA structure but also increased the proportion of alkyl C and enhanced the hydrophobicity of the HA structure in subsurface soil. Moreover, SEDI treatment significantly increased the proportion of aliphatic C/aromatic C of the HA structure in subsurface soil and improved the aliphatic property of HA, which had a significant effect on the HA structure compared to other treatments

Research data supporting "Engineered MATE multidrug transporters reveal two functionally distinct ion-coupling pathways in NorM from Vibrio cholerae"

Multidrug and toxic compound extrusion (MATE) transport proteins confer multidrug resistance on pathogenic microorganisms and affect pharmacokinetics in mammals. Our understanding of how MATE transporters work, has mostly relied on protein structures and MD simulations. However, the energetics of drug transport has not been studied in detail. Many MATE transporters utilise the electrochemical H+ or Na+ gradient to drive substrate efflux, but NorM-VC from Vibrio cholerae can utilise both forms of metabolic energy. To dissect the localisation and organisation of H+ and Na+ translocation pathways in NorM-VC we engineered chimaeric proteins in which the N-lobe of H+-coupled NorM-PS from Pseudomonas stutzeri is fused to the C-lobe of NorM-VC, and vice versa. Our findings in drug binding and transport experiments with chimaeric, mutant and wildtype transporters highlight the versatile nature of energy coupling in NorM-VC, which enables adaptation to fluctuating salinity levels in the natural habitat of V. cholerae. The research data in this dataset record support the publication by Raturi et al. in Communications Biology and refer to the figures that are incorporated in the paper, and the DNA and protein sequences of the NorM protein under study. Descriptions of the experimental details and statistical analyses are included in the Materials and Methods and figure legends of the paper

Magnetic Nitrogen-Doped Carbon Composites Decorated with Carbon Nanotubes for Adsorption of Malachite Green

In this work, magnetic nitrogen-doped carbon composites decorated with carbon nanotubes (CNT/Co@N–C) were successfully prepared by carbonizing ZIF-67(Co) and melamine with a ZIF-67(Co)/melamine material synthesized in situ at 525 °C under an inert atmosphere. To improve the malachite green removal performance of the adsorbent, calcination temperatures and mass ratios of the ZIF-67(Co)/melamine-derived CNT/Co@N–C materials were optimized. The malachite green removal performance was evaluated based on various experimental parameters including adsorbent dosage, pH, contact time, and salinity. The results showed that pH and salinity had a small effect on the adsorption process of CNT/Co@N–C materials, thus providing a possibility for practical application in water purification. The adsorption of malachite green onto the CNT/Co@N–C material was consistent with the Langmuir isothermal model and the pseudo-second-order model, and the maximum malachite green adsorption of the material was 3881.30 mg/g. The results also suggested that the adsorption was a monolayer chemisorption process that occurred through electrostatic and π–π stacking interactions. Finally, the recyclability, magnetic properties, high adsorption performance, and high stability of CNT/Co@N–C materials suggest that the materials are a promising adsorbent that can be employed in the removal of malachite green. The present work provides an idea for the synthesis of magnetic carbon nanotubes modified with nitrogen-doped carbon materials derived from metal–organic frameworks (MOFs)