Self-Energy Effects on the Low- to High-Energy Electronic Structure of SrVO3

The correlated electronic structure of SrVO3 has been investigated by angle-resolved photoemission spectroscopy using in-situ prepared thin films. Pronounced features of band renormalization have been observed: a sharp kink ~60 meV below the Fermi level (EF) and a broad so-called "high-energy kink" ~0.3 eV below EF as in the high-Tc cuprates although SrVO3 does not show magnetic fluctuations. We have deduced the self-energy in a wide energy range by applying the Kramers-Kronig relation to the observed spectra. The obtained self-energy clearly shows a large energy scale of ~0.7 eV which is attributed to electron-electron interaction and gives rise to the ~0.3 eV "kink" in the band dispersion as well as the incoherent peak ~1.5eV below EF. The present analysis enables us to obtain consistent picture both for the incoherent spectra and the band renormalization.Comment: 5 pages, 3 figure

Visualization and Measurement of ATP Levels in Living Cells Replicating Hepatitis C Virus Genome RNA

Adenosine 5′-triphosphate (ATP) is the primary energy currency of all living organisms and participates in a variety of cellular processes. Although ATP requirements during viral lifecycles have been examined in a number of studies, a method by which ATP production can be monitored in real-time, and by which ATP can be quantified in individual cells and subcellular compartments, is lacking, thereby hindering studies aimed at elucidating the precise mechanisms by which viral replication energized by ATP is controlled. In this study, we investigated the fluctuation and distribution of ATP in cells during RNA replication of the hepatitis C virus (HCV), a member of the Flaviviridae family. We demonstrated that cells involved in viral RNA replication actively consumed ATP, thereby reducing cytoplasmic ATP levels. Subsequently, a method to measure ATP levels at putative subcellular sites of HCV RNA replication in living cells was developed by introducing a recently-established Förster resonance energy transfer (FRET)-based ATP indicator, called ATeam, into the NS5A coding region of the HCV replicon. Using this method, we were able to observe the formation of ATP-enriched dot-like structures, which co-localize with non-structural viral proteins, within the cytoplasm of HCV-replicating cells but not in non-replicating cells. The obtained FRET signals allowed us to estimate ATP concentrations within HCV replicating cells as ∼5 mM at possible replicating sites and ∼1 mM at peripheral sites that did not appear to be involved in HCV replication. In contrast, cytoplasmic ATP levels in non-replicating Huh-7 cells were estimated as ∼2 mM. To our knowledge, this is the first study to demonstrate changes in ATP concentration within cells during replication of the HCV genome and increased ATP levels at distinct sites within replicating cells. ATeam may be a powerful tool for the study of energy metabolism during replication of the viral genome

Trans-complemented hepatitis C virus particles as a versatile tool for study of virus assembly and infection

AbstractIn this study, we compared the entry processes of trans-complemented hepatitis C virus particles (HCVtcp), cell culture-produced HCV (HCVcc) and HCV pseudoparticles (HCVpp). Anti-CD81 antibody reduced the entry of HCVtcp and HCVcc to almost background levels, and that of HCVpp by approximately 50%. Apolipoprotein E-dependent infection was observed with HCVtcp and HCVcc, but not with HCVpp, suggesting that the HCVtcp system is more relevant as a model of HCV infection than HCVpp. We improved the productivity of HCVtcp by introducing adapted mutations and by deleting sequences not required for replication from the subgenomic replicon construct. Furthermore, blind passage of the HCVtcp in packaging cells resulted in a novel mutation in the NS3 region, N1586D, which contributed to assembly of infectious virus. These results demonstrate that our plasmid-based system for efficient production of HCVtcp is beneficial for studying HCV life cycles, particularly in viral assembly and infection

The IMRD overflow phenomenon: form and function of Japanese-language journal documents

[EN] Despite the growing body of research on the overall organization of documents from academic journals, little is known about the use of IMRD-based structures—the pattern composed of Introduction, Methods, Results, and Discussion sections and its variants—in publication categories other than the research article. The current paper addresses this phenomenon with the focus on Japanese-language journal documents. Both the structure and the basic function of 186 documents in Japanese of five categories different from the research article were analyzed. It was found that IMRD-based structures are consistently used in two and sparsely used in one of the five categories. Additionally, it was found that most documents exhibiting these structures report some kind of investigation. The results point to a close connection between form and function; the overflow of IMRD-based structures seems to be an external sign of the advance in academic journals of publication categories centered on research processes.Aragão, RMLD. (2016). The IMRD overflow phenomenon: form and function of Japanese-language journal documents. Revista de Lingüística y Lenguas Aplicadas. 11:1-10. doi:10.4995/rlyla.2016.4652.SWORD1101

Spatial variation in the impact of dragonflies and debris on recreational ecosystem services in a floodplain wetland

Recreation is an important ecosystem service. The interaction between people and habitat components is rarely considered in the analyses of recreational experiences, making it difficult to predict what people will experience. In this study we develop a modelling framework that describes three stages of interaction between people and habitats. This framework considers: (1) the distribution of habitat components in the environment, (2) the proportion of the available components that visitors notice, and (3) the net impact of multiple components on the quality of the recreational experience. The model was applied to a case study river floodplain, and was used to estimate visitor exposure to a combination of positive habitat components (dragonflies) and negative components (debris). The model provided an index of net impacts on experience quality that showed spatial variation across the floodplain, and this analysis highlighted areas that would deliver more positive experiences to visitors. The results of a sensitivity analysis indicated that neglecting the noticeability (observation rate) of habitat components resulted in different predictions. It is therefore important that the noticeability of habitat components is considered during analyses of recreational experiences, and recreational ecosystem service valuations

Controlling gold nanoparticle assembly on electron beam-reduced nitrophenyl self-assembled monolayers <i>via</i> electron dose

Electron beam lithography is a well-established tool suitable for the modification of substrate surface chemistry. It therefore follows that the deposition and self-assembly of nanoparticles on a surface can be directed using this method. This work explores the effect of electron dose on the electron beam lithographic patterning of self-assembled monolayers (SAMs) on gold surfaces. Electron beam irradiation of the sample induces conversion of the SAM terminal functional aromatic nitro (NO2) moieties to aromatic amino (NH2) moieties. The cationic NH2 functionalised regions direct the site-specific assembly of anionic citrate-passivated gold nanoparticles in aqueous solution at pH 4.5. Control of nanoparticle attachment to the SAM is demonstrated over the exposure range 5000–125,000 uC/cm2. Overexposure led to significant numbers of secondary electrons reaching the surface, causing conversion of functional aromatic moieties outside of the regions irradiated, which reduced feature quality and regional selectivity of adsorption