Subdiagrams and invariant measures on Bratteli diagrams

We study ergodic finite and infinite measures defined on the path space $X_{B}$ of a Bratteli diagram $B$ which are invariant with respect to the tail equivalence relation on $X_{B}$. Our interest is focused on measures supported by vertex and edge subdiagrams of $B$. We give several criteria when a finite invariant measure defined on the path space of a subdiagram of $B$ extends to a finite invariant measure on $B$. Given a finite ergodic measure on a Bratteli diagram $B$ and a subdiagram $B^{\prime }$ of $B$, we find the necessary and sufficient conditions under which the measure of the path space $X_{B^{\prime }}$ of $B^{\prime }$ is positive. For a class of Bratteli diagrams of finite rank, we determine when they have maximal possible number of ergodic invariant measures. The case of diagrams of rank two is completely studied. We also include an example which explicitly illustrates the proven results.</jats:p

Competing impurities and reentrant magnetism in La(2-x)Sr(x)Cu(1-z)Zn(z)O(4) revisited. The role of the Dzyaloshinskii-Moriya and XY anisotropies

We study the order-from-disorder transition and reentrant magnetism in La(2-x)Sr(x)Cu(1-z)Zn(z)O(4) within the framework of a long-wavelength nonlinear sigma model that properly incorporates the Dzyaloshinskii-Moriya and XY anisotropies. Doping with nonmagnetic impurities, such as Zn, is considered according to classical percolation theory, whereas the effect of Sr, which introduces charge carriers into the CuO(2) planes, is described as a dipolar frustration of the antiferromagnetic order. We calculate several magnetic, thermodynamic, and spectral properties of the system, such as the antiferromagnetic order parameter, the Neel temperature, the spin-stiffness, and the anisotropy gaps, as well as their evolution with both Zn and Sr doping. We explain the nonmonotonic and reentrant behavior experimentally observed for T_N by Hucker et al. in Phys. Rev. B 59, R725 (1999), as resulting from the reduction, due to the nonmagnetic impurities, of the dipolar frustration induced by the charge carriers (order-from-disorder). Furthermore, we find a similar nonmonotonic and reentrant behavior for all the other observables studied. Most remarkably, our results show that while for x=2% and z=0 the Dzyaloshinskii-Moriya gap \Delta_{DM}=0, for z=15% it is approximately \Delta_{DM} = 7.5 cm^(-1). The later is larger than the lowest low-frequency cutoff for Raman spectroscopy (~ 5 cm^(-1)), and could thus be observed in one-magnon Raman scattering.Comment: 13 pages, 10 figure

Senior Programmers: Characteristics of Elderly Users from Stack Overflow

In this paper we presents results of research about elderly users of Stack Overflow (Question and Answer portal for programmers). They have different roles, different main activities and different habits. They are an important part of the community, as they tend to have higher reputation and they like to share their knowledge. This is a great example of possible way of keeping elderly people active and helpful for society

Cell Wall Anchoring of the Campylobacter Antigens to Lactococcus lactis

Campylobacter jejuni is the most frequent cause of human food-borne gastroenteritis and chicken meat is the main source of infection. Recent studies showed that broiler chicken immunization against Campylobacter should be the most efficient way to lower the number of human infections by this pathogen. Induction of the mucosal immune system after oral antigen administration should provide protective immunity to chickens. In this work we tested the usefulness of Lactococcus lactis, the most extensively studied lactic acid bacterium, as a delivery vector for Campylobacter antigens. First we constructed hybrid protein – CjaA antigen presenting CjaD peptide epitopes on its surface. We showed that specific rabbit anti-rCjaAD serum reacted strongly with both CjaA and CjaD produced by a wild type Campylobacter jejuni strain. Next, rCjaAD and CjaA were fused to the C-terminus of the L. lactis YndF containing the LPTXG motif. The genes expressing these proteins were transcribed under control of the L. lactis Usp45 promoter and their products contain the Usp45 signal sequences. This strategy ensures a cell surface location of both analysed proteins, which was confirmed by immunofluorescence assay. In order to evaluate the impact of antigen location on vaccine prototype efficacy, a L. lactis strain producing cytoplasm-located rCjaAD was also generated. Animal experiments showed a decrease of Campylobacter cecal load in vaccinated birds as compared with the control group and showed that the L. lactis harboring the surface-exposed rCjaAD antigen afforded greater protection than the L. lactis producing cytoplasm-located rCjaAD. To the best of our knowledge, this is the first attempt to employ LAB (Lactic Acid Bacteria) strains as a mucosal delivery vehicle for chicken immunization. Although the observed reduction of chicken colonization by Campylobacter resulting from vaccination was rather moderate, the experiments showed that LAB strains can be considered as an alternative vector to deliver heterologous antigens to the bird immune system. Additionally, the analysis of the structure and immunogenicity of the generated rCjaAD hybrid protein showed that the CjaA antigen can be considered as a starting point to construct multiepitope anti-Campylobacter vaccines

Radial solitons in armchair carbon nanotubes

Radial solitons are investigated in armchair carbon nanotubes using a generalized Lennard-Jones potential. The radial solitons are found in terms of moving kink defects whose velocity obeys a dispersion relation. Effects of lattice discreteness on the shape of kink defects are examined by estimating the Peierls stress. Results suggest that the typical size for an unpinned kink phase is of the order of a lattice spacing.Comment: 11 pages, 3(eps) figure

Diverse tick-borne microorganisms identified in free-living ungulates in Slovakia

Background: Free-living ungulates are hosts of ixodid ticks and reservoirs of tick-borne microorganisms in central Europe and many regions around the world. Tissue samples and engorged ticks were obtained from roe deer, red deer, fallow deer, mouflon, and wild boar hunted in deciduous forests of south-western Slovakia. DNA isolated from these samples was screened for the presence of tick-borne microorganisms by PCR-based methods. Results: Ticks were found to infest all examined ungulate species. The principal infesting tick was Ixodes ricinus, identified on 90.4% of wildlife, and included all developmental stages. Larvae and nymphs of Haemaphysalis concinna were feeding on 9.6% of wildlife. Two specimens of Dermacentor reticulatus were also identified. Ungulates were positive for A. phagocytophilum and Theileria spp. Anaplasma phagocytophilum was found to infect 96.1% of cervids, 88.9% of mouflon, and 28.2% of wild boar, whereas Theileria spp. was detected only in cervids (94.6%). Importantly, a high rate of cervids (89%) showed mixed infections with both these microorganisms. In addition to A. phagocytophilum and Theileria spp., Rickettsia helvetica, R. monacensis, unidentified Rickettsia sp., Coxiella burnetii, "Candidatus Neoehrlichia mikurensis", Borrelia burgdorferi (s.l.) and Babesia venatorum were identified in engorged I. ricinus. Furthermore, A. phagocytophilum, Babesia spp. and Theileria spp. were detected in engorged H. concinna. Analysis of 16S rRNA and groEL gene sequences revealed the presence of five and two A. phagocytophilum variants, respectively, among which sequences identified in wild boar showed identity to the sequence of the causative agent of human granulocytic anaplasmosis (HGA). Phylogenetic analysis of Theileria 18S rRNA gene sequences amplified from cervids and engorged I. ricinus ticks segregated jointly with sequences of T. capreoli isolates into a moderately supported monophyletic clade. Conclusions: The findings indicate that free-living ungulates are reservoirs for A. phagocytophilum and Theileria spp. and engorged ixodid ticks attached to ungulates are good sentinels for the presence of agents of public and veterinary concern. Further analyses of the A. phagocytophilum genetic variants and Theileria species and their associations with vector ticks and free-living ungulates are required.Fil: Kazimírová, Mária. Slovak Academy of Sciences. Institute of Zoology; EslovaquiaFil: Hamšíková, Zuzana. Slovak Academy of Sciences. Institute of Zoology; EslovaquiaFil: Spitalská, Eva. Slovak Academy of Sciences. Institute of Virology. Biomedical Research Center,; EslovaquiaFil: Minichová, Lenka. Slovak Academy of Sciences. Institute of Virology. Biomedical Research Center,; EslovaquiaFil: Mahríková, Lenka. Slovak Academy of Sciences. Institute of Zoology; EslovaquiaFil: Caban, Radoslav. Široká ; EslovaquiaFil: Sprong, Hein. National Institute for Public Health and Environment.Laboratory for Zoonoses and Environmental Microbiology; Países BajosFil: Fonville, Manoj. National Institute for Public Health and Environment.Laboratory for Zoonoses and Environmental Microbiology; Países BajosFil: Schnittger, Leonhard. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación en Ciencias Veterinarias y Agronómicas. Instituto de Patobiología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Kocianová, Elena. Slovak Academy of Sciences. Institute of Virology. Biomedical Research Center,; Eslovaqui

Protecting wound edges from infection using an Alexis wound retractor

Wstęp. Zakażenia ran operacyjnych towarzyszą ludzkości od zarania dziejów. Przez wieki były jedną z głównych przyczyn zgonów. Pomimo rozwoju wielu dziedzin życia, postęp w ich leczeniu nastąpił faktycznie w ciągu ostatnich stu siedemdziesięciu lat. Niemniej jednak problem zakażeń ran operacyjnych jest nadal aktualny pomimo szerokiego zastosowania działań profilaktycznych. Uważa się, że ilość tego rodzaju zakażeń jest jednym z najistotniej-szych wyznaczników rozwoju medycyny. Autorzy założyli, że zastosowanie jednorazowego retraktora ran Alexis zmniejszy ilość zakażeń ran operacyjnych, w szczególności u chorych wysokiego ryzyka. Materiał i metoda. W celu rozwiązania problemu badawczego zastosowano metodę badań reprezentacyjnych, a jako narzędzie badawcze posłużył arkusz analizy dokumentów. Autorzy przyjęli, że badanie będzie wiarygodne, gdy ryzyko zakażenia rany operacyjnej będzie odpowiednio duże. Chorzy, spełniający założone kryteria, zostali zakwalifikowani do dwóch losowo z kompletowanych grup. Obie grupy liczyły po 15 osób, przy czym wiek grupy badanej wahał się pomiędzy 54-83 lat, zaś grupy kontrolnej 57-86 lat. W grupie badanej stosowano retraktor, w grupie kontrolnej nie. Rana operacyjna była oceniana w trakcie hospitalizacji pacjenta codziennie, a po wy-pisaniu z oddziału okresowo do 30-ego dnia po operacji. W przypadku pojawienia się infekcji w ranie, została ona potwierdzona bada-niem mikrobiologicznym. Wyniki i wnioski. W oparciu o analizę wyników badań można stwierdzić, że u chorych z grupy podwyższonego ryzyka zastosowanie retraktora ran operacyjnych Alexis zmniejsza prawdopodobieństwo zakażenia rany operacyjnej, a skuteczna mechaniczna protekcja rany operacyjnej powinna stać się stałym elementem działań profilaktycznych zmierzających do ograniczenia ilości zakażeń ran operacyjny.Introduction. The infections of surgical wounds have been very much around since the beginnings of mankind. For ages they have been one of the predominant causes of death. Despite the fact that many aspects of life have undergone rapid developments, the progress in surgical wound treatment emerged during the last 170 years. Nevertheless, the problem of surgical wound infection is still a threat even despite many preventive actions. It is widely acknowledged that the number of those infections is one of the most crucial indicator of the development of medicine. The author has assumed that the use of a disposable Alexis wound retractor is going to decrease the number of surgical infections, especially among high-risk patients. The material and the method. In order to solve the research problem, the sampling procedure method was used. The research instrument was document analysis worksheet. The authors assumed that the re-search would be more credible if the risk of surgical wound infection is high enough. The patients who met the criteria were divided randomly into two groups. Both groups had 15 people; their ages varied from 54 to 83 in the sample group and from 57 to 86 in the control group. The retractor was used in the sample group and not in the control group. The surgical wounds were assessed each day while the patient stayed at the hospital, and after that periodically until 30 days after the operation. If the wound started showing indications of an infection, a microbiological test was run to confirm it. The results and conclusions. Judging by the analysis of the research results, one can conclude that the use of an Alexis surgical wound retractor on high-risk patients decreases the probability of a wound infection and the effective mechanical protection of surgical wounds should become a constant element of preventive actions aimed at limiting the number of surgical wound infections

Versatile approach for functional analysis of human proteins and efficient stable cell line generation using FLP-mediated recombination system

Deciphering a function of a given protein requires investigating various biological aspects. Usually, the protein of interest is expressed with a fusion tag that aids or allows subsequent analyses. Additionally, downregulation or inactivation of the studied gene enables functional studies. Development of the CRISPR/Cas9 methodology opened many possibilities but in many cases it is restricted to non-essential genes. Recombinase-dependent gene integration methods, like the Flp-In system, are very good alternatives. The system is widely used in different research areas, which calls for the existence of compatible vectors and efficient protocols that ensure straightforward DNA cloning and generation of stable cell lines. We have created and validated a robust series of 52 vectors for streamlined generation of stable mammalian cell lines using the FLP recombinase-based methodology. Using the sequence-independent DNA cloning method all constructs for a given coding-sequence can be made with just three universal PCR primers. Our collection allows tetracycline-inducible expression of proteins with various tags suitable for protein localization, FRET, bimolecular fluorescence complementation (BiFC), protein dynamics studies (FRAP), co-immunoprecipitation, the RNA tethering assay and cell sorting. Some of the vectors contain a bidirectional promoter for concomitant expression of miRNA and mRNA, so that a gene can be silenced and its product replaced by a mutated miRNA-insensitive version. Our toolkit and protocols have allowed us to create more than 500 constructs with ease. We demonstrate the efficacy of our vectors by creating stable cell lines with various tagged proteins (numatrin, fibrillarin, coilin, centrin, THOC5, PCNA). We have analysed transgene expression over time to provide a guideline for future experiments and compared the effectiveness of commonly used inducers for tetracycline-responsive promoters. As proof of concept we examined the role of the exoribonuclease XRN2 in transcription termination by RNAseq

Characterization of poly- and single-crystal uranium-molybdenum alloy thin films

Poly- and single-crystal thin films of U-Mo alloys have been grown both on glass and sapphire substrates by UHV magnetron sputtering. X-ray and Electron Backscatter Diffraction data indicate that for single-crystal U1-xMox alloys, the pure cubic uranium gamma-phase exists for x > 0.22 (10 wt.% Mo). Below 10 wt.% Mo concentration, the resulting thin film alloys exhibited a mixed alpha-gamma uranium phase composition