Detection of experimental ERP effects in combined EEG-fMRI: evaluating the benefits of interleaved acquisition and Independent Component Analysis

Copyright © 2011 Elsevier. NOTICE: this is the author’s version of a work that was accepted for publication in Clinical Neurophysiology . Changes resulting from the publishing process, such as peer review, editing, corrections, structural formatting, and other quality control mechanisms may not be reflected in this document. Changes may have been made to this work since it was submitted for publication. A definitive version was subsequently published in Clinical Neurophysiology, 2011 Vol. 122 Issue 2, pp. 267-77 DOI: http://dx.doi.org/10.1016/j.clinph.2010.06.033Objective The present study examined the benefit of rapid alternation of EEG and fMRI (a common strategy for avoiding artifact caused by rapid switching of MRI gradients) for detecting experimental modulations of ERPs in combined EEG–fMRI. The study also assessed the advantages of aiding the extraction of specific ERP components by means of signal decomposition using Independent Component Analysis (ICA). Methods ‘Go–nogo’ task stimuli were presented either during fMRI scanning or in the gaps between fMRI scans, resulting in ‘gradient’ and ‘no-gradient’ ERPs. ‘Go–nogo’ differences in the N2 and P3 components were subjected to conventional ERP analysis, as well as single-trial and reliability analyses. Results Comparable N2 and P3 enhancement on ‘nogo’ trials was found in the ‘gradient’ and ‘no-gradient’ ERPs. ICA-based signal decomposition resulted in better validity (as indicated by topography), greater stability and lower measurement error of the predicted ERP effects. Conclusions While there was little or no benefit of acquiring ERPs in the gaps between fMRI scans, ICA decomposition did improve the detection of experimental ERP modulations. Significance Simultaneous and continuous EEG–fMRI acquisition is preferable to interleaved protocols. ICA-based decomposition is useful not only for artifact cancellation, but also for the extraction of specific ERP components

Mind over chatter: plastic up-regulation of the fMRI alertness network by EEG neurofeedback

EEG neurofeedback (NFB) is a brain-computer interface (BCI) approach used to shape brain oscillations by means of real-time feedback from the electroencephalogram (EEG), which is known to reflect neural activity across cortical networks. Although NFB is being evaluated as a novel tool for treating brain disorders, evidence is scarce on the mechanism of its impact on brain function. In this study with 34 healthy participants, we examined whether, during the performance of an attentional auditory oddball task, the functional connectivity strength of distinct fMRI networks would be plastically altered after a 30-min NFB session of alpha-band reduction (n=17) versus a sham-feedback condition (n=17). Our results reveal that compared to sham, NFB induced a specific increase of functional connectivity within the alertness/salience network (dorsal anterior and mid cingulate), which was detectable 30 minutes after termination of training. Crucially, these effects were significantly correlated with reduced mind-wandering 'on-task' and were coupled to NFB-mediated resting state reductions in the alpha-band (8-12 Hz). No such relationships were evident for the sham condition. Although group default-mode network (DMN) connectivity was not significantly altered following NFB, we observed a positive association between modulations of resting alpha amplitude and precuneal connectivity, both correlating positively with frequency of mind-wandering. Our findings demonstrate a temporally direct, plastic impact of NFB on large-scale brain functional networks, and provide promising neurobehavioral evidence supporting its use as a noninvasive tool to modulate brain function in health and disease

Disambiguating the role of blood flow and global signal with partial information decomposition

Global signal (GS) is an ubiquitous construct in resting state functional magnetic resonance imaging (rs-fMRI), associated to nuisance, but containing by definition most of the neuronal signal. Global signal regression (GSR) effectively removes the impact of physiological noise and other artifacts, but at the same time it alters correlational patterns in unpredicted ways. Performing GSR taking into account the underlying physiology (mainly the blood arrival time) has been proven to be beneficial. From these observations we aimed to: 1) characterize the effect of GSR on network-level functional connectivity in a large dataset; 2) assess the complementary role of global signal and vessels; and 3) use the framework of partial information decomposition to further look into the joint dynamics of the global signal and vessels, and their respective influence on the dynamics of cortical areas. We observe that GSR affects intrinsic connectivity networks in the connectome in a non-uniform way. Furthermore, by estimating the predictive information of blood flow and the global signal using partial information decomposition, we observe that both signals are present in different amounts across intrinsic connectivity networks. Simulations showed that differences in blood arrival time can largely explain this phenomenon, while using hemodynamic and calcium mouse recordings we were able to confirm the presence of vascular effects, as calcium recordings lack hemodynamic information. With these results we confirm network-specific effects of GSR and the importance of taking blood flow into account for improving de-noising methods. Additionally, and beyond the mere issue of data denoising, we quantify the diverse and complementary effect of global and vessel BOLD signals on the dynamics of cortical areas

Auditory and visual connectivity gradients in frontoparietal cortex

A frontoparietal network of brain regions is often implicated in both auditory and visual information processing. Although it is possible that the same set of multimodal regions subserves both modalities, there is increasing evidence that there is a differentiation of sensory function within frontoparietal cortex. Magnetic resonance imaging (MRI) in humans was used to investigate whether different frontoparietal regions showed intrinsic biases in connectivity with visual or auditory modalities. Structural connectivity was assessed with diffusion tractography and functional connectivity was tested using functional MRI. A dorsal–ventral gradient of function was observed, where connectivity with visual cortex dominates dorsal frontal and parietal connections, while connectivity with auditory cortex dominates ventral frontal and parietal regions. A gradient was also observed along the posterior–anterior axis, although in opposite directions in prefrontal and parietal cortices. The results suggest that the location of neural activity within frontoparietal cortex may be influenced by these intrinsic biases toward visual and auditory processing. Thus, the location of activity in frontoparietal cortex may be influenced as much by stimulus modality as the cognitive demands of a task. It was concluded that stimulus modality was spatially encoded throughout frontal and parietal cortices, and was speculated that such an arrangement allows for top–down modulation of modality-specific information to occur within higher-order cortex. This could provide a potentially faster and more efficient pathway by which top–down selection between sensory modalities could occur, by constraining modulations to within frontal and parietal regions, rather than long-range connections to sensory cortices

From rest to task

A primary goal of neuroscience research on psychiatric disorders such as schizophrenia is to enhance the current understanding of underlying biological mechanisms in order to develop novel interventions. Human brain functions are maintained through activity of large-scale brain networks. Accordingly, deficient perceptual and cognitive processing can be caused by failures of functional integration within networks, as reflected by the disconnection hypothesis of schizophrenia. Various neuroimaging techniques can be applied to study functional brain networks, each having different strengths. Frequently used complementary methods are the electroencephalography (EEG) and functional magnetic resonance imaging (fMRI), which were shown to have a common basis. Given the feasibility of combined EEG and fMRI measurement, EEG signatures of functional networks have been described, providing complimentary information about the functional state of networks. Both at rest and during task completion, many independent EEG and fMRI studies confirmed deficient network connectivity in schizophrenia. However, a rather diffuse picture with hyper- and hypo- activations within and between specific networks was reported. Furthermore, the theory of state dependent information processing argues that spontaneous and prestimulus brain activity interacts with upcoming task-related processes. Consequently, observed network deficits that vary according to task conditions could be caused by differences in resting or prestimulus state in schizophrenia. Based on that background, the present thesis aimed to increase the understanding of aberrant functional networks in schizophrenia by using simultaneous EEG-fMRI under different conditions. One study investigated integrative mechanisms of networks during eyes-open (EO) resting state using a common-phase synchronization measure in an EEG-informed fMRI analysis (study 3). The other two studies (studies 1&2) used an fMRI-informed EEG analysis: The second study was an extension of the first, which was performed in healthy subjects only. Hence, the same methodologies and analyses were applied in both studies, but in the second study schizophrenia patients were compared to healthy controls. The associations between four temporally coherent networks (TCNs) – the default mode network (DMN), the dorsal attention network (dAN), left and right working memory networks (WMNs) – and power of three EEG frequency bands (theta, alpha, and beta band) during a verbal working memory (WM) task were investigated. Both resting state and task-related studies performed in schizophrenia patients (studies 2&3) revealed altered activation strength, functional states and interaction of TCNs, especially of the DMN. During rest (study 3), the DMN was differently integrated through common-phase synchronization in the delta (0.5 – 3.5Hz) and beta (13 – 30Hz) band. At prestimulus states of a verbal WM task, however, study 2 did not reveal differences in the activation level of the DMN between groups. Furthermore, from pre-to-post stimulus, the association of the DMN with frontal-midline (FM) theta (3 – 7Hz) band was altered, and a reduced suppression of the DMN during WM retention was detected. Schizophrenia patients also demonstrated abnormal interactions between networks: the DMN and dAN showed a reduced anti-correlation and the WMNs demonstrated an absent lateralization effect (study 2). The view that schizophrenia patients display TCN deficiencies is supported by the results of the present thesis. Especially the DMN and its interaction to the task-positive dAN showed specific alterations at different mental states and their interaction (during rest and from pre-to-post stimulus). Those alterations might at least partly explain observed symptomatology as attentional orientation deficits in patients. To conclude, functional networks as the DMN might represent promising targets for novel treatment options such as neurofeedback or transcranial direct current stimulation (tDCS)

Nonlinear ICA of fMRI reveals primitive temporal structures linked to rest, task, and behavioral traits

Accumulating evidence from whole brain functional magnetic resonance imaging (fMRI) suggests that the human brain at rest is functionally organized in a spatially and temporally constrained manner. However, because of their complexity, the fundamental mechanisms underlying time-varying functional networks are still not well under-stood. Here, we develop a novel nonlinear feature extraction framework called local space-contrastive learning (LSCL), which extracts distinctive nonlinear temporal structure hidden in time series, by training a deep temporal convolutional neural network in an unsupervised, data-driven manner. We demonstrate that LSCL identifies certain distinctive local temporal structures, referred to as temporal primitives, which repeatedly appear at different time points and spatial locations, reflecting dynamic resting-state networks. We also show that these temporal primitives are also present in task-evoked spatiotemporal responses. We further show that the temporal primitives capture unique aspects of behavioral traits such as fluid intelligence and working memory. These re-sults highlight the importance of capturing transient spatiotemporal dynamics within fMRI data and suggest that such temporal primitives may capture fundamental information underlying both spontaneous and task-induced fMRI dynamics.Peer reviewe