256 research outputs found
Recent advances in directional statistics
Mainstream statistical methodology is generally applicable to data observed
in Euclidean space. There are, however, numerous contexts of considerable
scientific interest in which the natural supports for the data under
consideration are Riemannian manifolds like the unit circle, torus, sphere and
their extensions. Typically, such data can be represented using one or more
directions, and directional statistics is the branch of statistics that deals
with their analysis. In this paper we provide a review of the many recent
developments in the field since the publication of Mardia and Jupp (1999),
still the most comprehensive text on directional statistics. Many of those
developments have been stimulated by interesting applications in fields as
diverse as astronomy, medicine, genetics, neurology, aeronautics, acoustics,
image analysis, text mining, environmetrics, and machine learning. We begin by
considering developments for the exploratory analysis of directional data
before progressing to distributional models, general approaches to inference,
hypothesis testing, regression, nonparametric curve estimation, methods for
dimension reduction, classification and clustering, and the modelling of time
series, spatial and spatio-temporal data. An overview of currently available
software for analysing directional data is also provided, and potential future
developments discussed.Comment: 61 page
Recent Developments in Complex and Spatially Correlated Functional Data
As high-dimensional and high-frequency data are being collected on a large
scale, the development of new statistical models is being pushed forward.
Functional data analysis provides the required statistical methods to deal with
large-scale and complex data by assuming that data are continuous functions,
e.g., a realization of a continuous process (curves) or continuous random
fields (surfaces), and that each curve or surface is considered as a single
observation. Here, we provide an overview of functional data analysis when data
are complex and spatially correlated. We provide definitions and estimators of
the first and second moments of the corresponding functional random variable.
We present two main approaches: The first assumes that data are realizations of
a functional random field, i.e., each observation is a curve with a spatial
component. We call them 'spatial functional data'. The second approach assumes
that data are continuous deterministic fields observed over time. In this case,
one observation is a surface or manifold, and we call them 'surface time
series'. For the two approaches, we describe software available for the
statistical analysis. We also present a data illustration, using a
high-resolution wind speed simulated dataset, as an example of the two
approaches. The functional data approach offers a new paradigm of data
analysis, where the continuous processes or random fields are considered as a
single entity. We consider this approach to be very valuable in the context of
big data.Comment: Some typos fixed and new references adde
Neural Connectivity with Hidden Gaussian Graphical State-Model
The noninvasive procedures for neural connectivity are under questioning.
Theoretical models sustain that the electromagnetic field registered at
external sensors is elicited by currents at neural space. Nevertheless, what we
observe at the sensor space is a superposition of projected fields, from the
whole gray-matter. This is the reason for a major pitfall of noninvasive
Electrophysiology methods: distorted reconstruction of neural activity and its
connectivity or leakage. It has been proven that current methods produce
incorrect connectomes. Somewhat related to the incorrect connectivity
modelling, they disregard either Systems Theory and Bayesian Information
Theory. We introduce a new formalism that attains for it, Hidden Gaussian
Graphical State-Model (HIGGS). A neural Gaussian Graphical Model (GGM) hidden
by the observation equation of Magneto-encephalographic (MEEG) signals. HIGGS
is equivalent to a frequency domain Linear State Space Model (LSSM) but with
sparse connectivity prior. The mathematical contribution here is the theory for
high-dimensional and frequency-domain HIGGS solvers. We demonstrate that HIGGS
can attenuate the leakage effect in the most critical case: the distortion EEG
signal due to head volume conduction heterogeneities. Its application in EEG is
illustrated with retrieved connectivity patterns from human Steady State Visual
Evoked Potentials (SSVEP). We provide for the first time confirmatory evidence
for noninvasive procedures of neural connectivity: concurrent EEG and
Electrocorticography (ECoG) recordings on monkey. Open source packages are
freely available online, to reproduce the results presented in this paper and
to analyze external MEEG databases
Tensor Analysis and Fusion of Multimodal Brain Images
Current high-throughput data acquisition technologies probe dynamical systems
with different imaging modalities, generating massive data sets at different
spatial and temporal resolutions posing challenging problems in multimodal data
fusion. A case in point is the attempt to parse out the brain structures and
networks that underpin human cognitive processes by analysis of different
neuroimaging modalities (functional MRI, EEG, NIRS etc.). We emphasize that the
multimodal, multi-scale nature of neuroimaging data is well reflected by a
multi-way (tensor) structure where the underlying processes can be summarized
by a relatively small number of components or "atoms". We introduce
Markov-Penrose diagrams - an integration of Bayesian DAG and tensor network
notation in order to analyze these models. These diagrams not only clarify
matrix and tensor EEG and fMRI time/frequency analysis and inverse problems,
but also help understand multimodal fusion via Multiway Partial Least Squares
and Coupled Matrix-Tensor Factorization. We show here, for the first time, that
Granger causal analysis of brain networks is a tensor regression problem, thus
allowing the atomic decomposition of brain networks. Analysis of EEG and fMRI
recordings shows the potential of the methods and suggests their use in other
scientific domains.Comment: 23 pages, 15 figures, submitted to Proceedings of the IEE
Globally-Coordinated Locally-Linear Modeling of Multi-Dimensional Data
This thesis considers the problem of modeling and analysis of continuous, locally-linear, multi-dimensional spatio-temporal data. Our work extends the previously reported theoretical work on the global coordination model to temporal analysis of continuous, multi-dimensional data. We have developed algorithms for time-varying data analysis and used them in full-scale, real-world applications. The applications demonstrated in this thesis include tracking, synthesis, recognitions and retrieval of dynamic objects based on their shape, appearance and motion. The proposed approach in this thesis has advantages over existing approaches to analyzing complex spatio-temporal data. Experiments show that the new modeling features of our approach improve the performance of existing approaches in many applications. In object tracking, our approach is the first one to track nonlinear appearance variations by using low-dimensional representation of the appearance change in globally-coordinated linear subspaces. In dynamic texture synthesis, we are able to model non-stationary dynamic textures, which cannot be handled by any of the existing approaches. In human motion synthesis, we show that realistic synthesis can be performed without using specific transition points, or key frames
Causal Modelling and Brain Connectivity in Functional Magnetic Resonance Imaging
Recent advances in data analysis and modeling allow the use of fMRI data to ask not just which brain regions are involved in various cognitive and perceptual tasks, but also how they communicate with each other. Karl Friston examines two different state-of-the-art approaches to modeling brain connectivity using neuroimaging
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