A novel approach for food intake detection using electroglottography

Many methods for monitoring diet and food intake rely on subjects self-reporting their daily intake. These methods are subjective, potentially inaccurate and need to be replaced by more accurate and objective methods. This paper presents a novel approach that uses an electroglottograph (EGG) device for an objective and automatic detection of food intake. Thirty subjects participated in a four-visit experiment involving the consumption of meals with self-selected content. Variations in the electrical impedance across the larynx caused by the passage of food during swallowing were captured by the EGG device. To compare performance of the proposed method with a well-established acoustical method, a throat microphone was used for monitoring swallowing sounds. Both signals were segmented into non-overlapping epochs of 30 s and processed to extract wavelet features. Subject-independent classifiers were trained, using artificial neural networks, to identify periods of food intake from the wavelet features. Results from leave-one-out cross validation showed an average per-epoch classification accuracy of 90.1% for the EGG-based method and 83.1% for the acoustic-based method, demonstrating the feasibility of using an EGG for food intake detection.Fil: Farooq, Muhammad. University of Alabama; Estados UnidosFil: Fontana, Juan Manuel. University of Alabama; Estados Unidos. Universidad Nacional de Río Cuarto. Facultad de Ingeniería. Departamento de Mecánica; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba; ArgentinaFil: Sazonov, Edward. University of Alabama; Estados Unido

Cervical Auscultation for the Identification of Swallowing Difficulties

Swallowing difficulties, commonly referred to as dysphagia, affect thousands of Americans every year. They have a multitude of causes, but in general they are known to increase the risk of aspiration when swallowing in addition to other physiological effects. Cervical auscultation has been recently applied to detect such difficulties non-invasively and various techniques for analysis and processing of the recorded signals have been proposed. We attempted to further this research in three key areas. First, we characterized swallows with regards to a multitude of time, frequency, and time-frequency features while paying special attention to the differences between swallows from healthy adults and safe dysphagic swallows as well as safe and unsafe dysphagic swallows. Second, we attempted to utilize deep belief networks in order to classify these states automatically and without the aid of a concurrent videofluoroscopic examination. Finally, we sought to improve some of the signal processing techniques used in this field. We both implemented the DBSCAN algorithm to better segment our physiological signals as well as applied the matched complex wavelet transform to cervical auscultation data in order to improve its quality for mathematical analysis

Using Transfer Learning to Train Individualized Models to Detect Eating Episodes from Daily Wrist Motion

This thesis considers the problem of detecting periods of eating in free-living conditions by analyzing wrist motion data collected using sensors embedded within a typical smartwatch. Previous work by our research group included the collection of a dataset containing 354 days of recorded wrist motion data from 351 different people (approximately one day of data per person) [42]. A machine learning model was then trained to classify this wrist motion data as either eating or non-eating [40]. We refer to this model as the group model. Subsequent work in our research group collected approximately ten days of data each for eight new individuals and trained a model for each person solely using their own data [51]. We refer to these models as individual models. It was observed that, in most cases, the individual models outperformed the group model when evaluating the data of their corresponding individual, but at the cost of requiring each individual to collect two weeks of additional data. The novelty of this work is using transfer learning to leverage features learned within the group model and apply them to new individual models to further increase performance and possibly reduce the amount of individual data needed. Two datasets were used in this work. The first was the Clemson All Day (CAD) dataset, which contains 354 days of recorded wrist motion data from 351 different participants (approximately one day of data per participant). The CAD dataset includes a total of 4,680 hours of data, including 1,063 meals. The second dataset used was the Multiday dataset, which is comprised of at least ten days of free-living wrist motion data each for eight individuals. Both datasets were pre-processed using smoothing and normalization techniques. Training samples were then generated using a sliding window approach with a window size of six minutes. All group, individual, and transfer learning models evaluated in this work utilized an identical convolutional neural network (CNN) architecture. For a given window, the classifier generated a value that represented the probability of eating (P(E)) in the window. Entire days of wrist motion data were passed to the network to produce a continuous P(E) sequence for an entire day. This sequence was processed using a dual thresholding technique to locate predicted segments of eating within the recording. In our results, the transfer learning model achieved an eating episode true positive rate (TPR) of 81% with a false positive per true positive ratio (FP/TP) of 1.40. Compared to the individual model, this was a 6% decrease in episode TPR but a 43% improvement in FP/TP. The transfer learning model showed a time weighted accuracy (AccW) of 80%, which was only a 1% decrease relative to the individual model. After removing an outlier from the Multiday dataset and rerunning our experiments, the transfer learning model showed an episode TPR of 86% with an FP/TP of 1.34. Compared to the individual model, this was only a 3% decrease in TPR and a 46% improvement in FP/TP. By excluding the outlier, the transfer learning model also showed an 83% AccW, which was a 1% increase relative to the individual model. Furthermore, the transfer learning model was able to reduce training times by 12% compared to the individual model. In conclusion, we were able to find evidence that transfer learning could be utilized in order to improve individualized eating detection models by increasing weighted accuracy and decreasing false detections

Models and analysis of vocal emissions for biomedical applications: 5th International Workshop: December 13-15, 2007, Firenze, Italy

The MAVEBA Workshop proceedings, held on a biannual basis, collect the scientific papers presented both as oral and poster contributions, during the conference. The main subjects are: development of theoretical and mechanical models as an aid to the study of main phonatory dysfunctions, as well as the biomedical engineering methods for the analysis of voice signals and images, as a support to clinical diagnosis and classification of vocal pathologies. The Workshop has the sponsorship of: Ente Cassa Risparmio di Firenze, COST Action 2103, Biomedical Signal Processing and Control Journal (Elsevier Eds.), IEEE Biomedical Engineering Soc. Special Issues of International Journals have been, and will be, published, collecting selected papers from the conference

Models and Analysis of Vocal Emissions for Biomedical Applications

The MAVEBA Workshop proceedings, held on a biannual basis, collect the scientific papers presented both as oral and poster contributions, during the conference. The main subjects are: development of theoretical and mechanical models as an aid to the study of main phonatory dysfunctions, as well as the biomedical engineering methods for the analysis of voice signals and images, as a support to clinical diagnosis and classification of vocal pathologies

Models and Analysis of Vocal Emissions for Biomedical Applications

The MAVEBA Workshop proceedings, held on a biannual basis, collect the scientific papers presented both as oral and poster contributions, during the conference. The main subjects are: development of theoretical and mechanical models as an aid to the study of main phonatory dysfunctions, as well as the biomedical engineering methods for the analysis of voice signals and images, as a support to clinical diagnosis and classification of vocal pathologies

Automatic Recognition of Non-Verbal Acoustic Communication Events With Neural Networks

Non-verbal acoustic communication is of high importance to humans and animals: Infants use the voice as a primary communication tool. Animals of all kinds employ acoustic communication, such as chimpanzees, which use pant-hoot vocalizations for long-distance communication. Many applications require the assessment of such communication for a variety of analysis goals. Computational systems can support these areas through automatization of the assessment process. This is of particular importance in monitoring scenarios over large spatial and time scales, which are infeasible to perform manually. Algorithms for sound recognition have traditionally been based on conventional machine learning approaches. In recent years, so-called representation learning approaches have gained increasing popularity. This particularly includes deep learning approaches that feed raw data to deep neural networks. However, there remain open challenges in applying these approaches to automatic recognition of non-verbal acoustic communication events, such as compensating for small data set sizes. The leading question of this thesis is: How can we apply deep learning more effectively to automatic recognition of non-verbal acoustic communication events? The target communication types were specifically (1) infant vocalizations and (2) chimpanzee long-distance calls. This thesis comprises four studies that investigated aspects of this question: Study (A) investigated the assessment of infant vocalizations by laypersons. The central goal was to derive an infant vocalization classification scheme based on the laypersons' perception. The study method was based on the Nijmegen Protocol, where participants rated vocalization recordings through various items, such as affective ratings and class labels. Results showed a strong association between valence ratings and class labels, which was used to derive a classification scheme. Study (B) was a comparative study on various neural network types for the automatic classification of infant vocalizations. The goal was to determine the best performing network type among the currently most prevailing ones, while considering the influence of their architectural configuration. Results showed that convolutional neural networks outperformed recurrent neural networks and that the choice of the frequency and time aggregation layer inside the network is the most important architectural choice. Study (C) was a detailed investigation on computer vision-like convolutional neural networks for infant vocalization classification. The goal was to determine the most important architectural properties for increasing classification performance. Results confirmed the importance of the aggregation layer and additionally identified the input size of the fully-connected layers and the accumulated receptive field to be of major importance. Study (D) was an investigation on compensating class imbalance for chimpanzee call detection in naturalistic long-term recordings. The goal was to determine which compensation method among a selected group improved performance the most for a deep learning system. Results showed that spectrogram denoising was most effective, while methods for compensating relative imbalance either retained or decreased performance.:1. Introduction 2. Foundations in Automatic Recognition of Acoustic Communication 3. State of Research 4. Study (A): Investigation of the Assessment of Infant Vocalizations by Laypersons 5. Study (B): Comparison of Neural Network Types for Automatic Classification of Infant Vocalizations 6. Study (C): Detailed Investigation of CNNs for Automatic Classification of Infant Vocalizations 7. Study (D): Compensating Class Imbalance for Acoustic Chimpanzee Detection With Convolutional Recurrent Neural Networks 8. Conclusion and Collected Discussion 9. AppendixNonverbale akustische Kommunikation ist für Menschen und Tiere von großer Bedeutung: Säuglinge nutzen die Stimme als primäres Kommunikationsmittel. Schimpanse verwenden sogenannte 'Pant-hoots' und Trommeln zur Kommunikation über weite Entfernungen. Viele Anwendungen erfordern die Beurteilung solcher Kommunikation für verschiedenste Analyseziele. Algorithmen können solche Bereiche durch die Automatisierung der Beurteilung unterstützen. Dies ist besonders wichtig beim Monitoring langer Zeitspannen oder großer Gebiete, welche manuell nicht durchführbar sind. Algorithmen zur Geräuscherkennung verwendeten bisher größtenteils konventionelle Ansätzen des maschinellen Lernens. In den letzten Jahren hat eine alternative Herangehensweise Popularität gewonnen, das sogenannte Representation Learning. Dazu gehört insbesondere Deep Learning, bei dem Rohdaten in tiefe neuronale Netze eingespeist werden. Jedoch gibt es bei der Anwendung dieser Ansätze auf die automatische Erkennung von nonverbaler akustischer Kommunikation ungelöste Herausforderungen, wie z.B. die Kompensation der relativ kleinen Datenmengen. Die Leitfrage dieser Arbeit ist: Wie können wir Deep Learning effektiver zur automatischen Erkennung nonverbaler akustischer Kommunikation verwenden? Diese Arbeit konzentriert sich speziell auf zwei Kommunikationsarten: (1) vokale Laute von Säuglingen (2) Langstreckenrufe von Schimpansen. Diese Arbeit umfasst vier Studien, welche Aspekte dieser Frage untersuchen: Studie (A) untersuchte die Beurteilung von Säuglingslauten durch Laien. Zentrales Ziel war die Ableitung eines Klassifikationsschemas für Säuglingslaute auf der Grundlage der Wahrnehmung von Laien. Die Untersuchungsmethode basierte auf dem sogenannten Nijmegen-Protokoll. Hier beurteilten die Teilnehmenden Lautaufnahmen von Säuglingen anhand verschiedener Variablen, wie z.B. affektive Bewertungen und Klassenbezeichnungen. Die Ergebnisse zeigten eine starke Assoziation zwischen Valenzbewertungen und Klassenbezeichnungen, die zur Ableitung eines Klassifikationsschemas verwendet wurde. Studie (B) war eine vergleichende Studie verschiedener Typen neuronaler Netzwerke für die automatische Klassifizierung von Säuglingslauten. Ziel war es, den leistungsfähigsten Netzwerktyp unter den momentan verbreitetsten Typen zu ermitteln. Hierbei wurde der Einfluss verschiedener architektonischer Konfigurationen innerhalb der Typen berücksichtigt. Die Ergebnisse zeigten, dass Convolutional Neural Networks eine höhere Performance als Recurrent Neural Networks erreichten. Außerdem wurde gezeigt, dass die Wahl der Frequenz- und Zeitaggregationsschicht die wichtigste architektonische Entscheidung ist. Studie (C) war eine detaillierte Untersuchung von Computer Vision-ähnlichen Convolutional Neural Networks für die Klassifizierung von Säuglingslauten. Ziel war es, die wichtigsten architektonischen Eigenschaften zur Steigerung der Erkennungsperformance zu bestimmen. Die Ergebnisse bestätigten die Bedeutung der Aggregationsschicht. Zusätzlich Eigenschaften, die als wichtig identifiziert wurden, waren die Eingangsgröße der vollständig verbundenen Schichten und das akkumulierte rezeptive Feld. Studie (D) war eine Untersuchung zur Kompensation der Klassenimbalance zur Erkennung von Schimpansenrufen in Langzeitaufnahmen. Ziel war es, herauszufinden, welche Kompensationsmethode aus einer Menge ausgewählter Methoden die Performance eines Deep Learning Systems am meisten verbessert. Die Ergebnisse zeigten, dass Spektrogrammentrauschen am effektivsten war, während Methoden zur Kompensation des relativen Ungleichgewichts die Performance entweder gleichhielten oder verringerten.:1. Introduction 2. Foundations in Automatic Recognition of Acoustic Communication 3. State of Research 4. Study (A): Investigation of the Assessment of Infant Vocalizations by Laypersons 5. Study (B): Comparison of Neural Network Types for Automatic Classification of Infant Vocalizations 6. Study (C): Detailed Investigation of CNNs for Automatic Classification of Infant Vocalizations 7. Study (D): Compensating Class Imbalance for Acoustic Chimpanzee Detection With Convolutional Recurrent Neural Networks 8. Conclusion and Collected Discussion 9. Appendi

Sensorimotor Modulations by Cognitive Processes During Accurate Speech Discrimination: An EEG Investigation of Dorsal Stream Processing

Internal models mediate the transmission of information between anterior and posterior regions of the dorsal stream in support of speech perception, though it remains unclear how this mechanism responds to cognitive processes in service of task demands. The purpose of the current study was to identify the influences of attention and working memory on sensorimotor activity across the dorsal stream during speech discrimination, with set size and signal clarity employed to modulate stimulus predictability and the time course of increased task demands, respectively. Independent Component Analysis of 64–channel EEG data identified bilateral sensorimotor mu and auditory alpha components from a cohort of 42 participants, indexing activity from anterior (mu) and posterior (auditory) aspects of the dorsal stream. Time frequency (ERSP) analysis evaluated task-related changes in focal activation patterns with phase coherence measures employed to track patterns of information flow across the dorsal stream. ERSP decomposition of mu clusters revealed event-related desynchronization (ERD) in beta and alpha bands, which were interpreted as evidence of forward (beta) and inverse (alpha) internal modeling across the time course of perception events. Stronger pre-stimulus mu alpha ERD in small set discrimination tasks was interpreted as more efficient attentional allocation due to the reduced sensory search space enabled by predictable stimuli. Mu-alpha and mu-beta ERD in peri- and post-stimulus periods were interpreted within the framework of Analysis by Synthesis as evidence of working memory activity for stimulus processing and maintenance, with weaker activity in degraded conditions suggesting that covert rehearsal mechanisms are sensitive to the quality of the stimulus being retained in working memory. Similar ERSP patterns across conditions despite the differences in stimulus predictability and clarity, suggest that subjects may have adapted to tasks. In light of this, future studies of sensorimotor processing should consider the ecological validity of the tasks employed, as well as the larger cognitive environment in which tasks are performed. The absence of interpretable patterns of mu-auditory coherence modulation across the time course of speech discrimination highlights the need for more sensitive analyses to probe dorsal stream connectivity

Effective EEG analysis for advanced AI-driven motor imagery BCI systems

Developing effective signal processing for brain-computer interfaces (BCIs) and brain-machine interfaces (BMIs) involves factoring in three aspects of functionality: classification performance, execution time, and the number of data channels used. The contributions in this thesis are centered on these three issues. Contributions are focused on the classification of motor imagery (MI) data, which is generated during imagined movements. Typically, EEG time-series data is segmented for data augmentation or to mimic buffering that happens in an online BCI. A multi-segment decision fusion approach is presented, which takes consecutive temporal segments of EEG data, and uses decision fusion to boost classification performance. It was computationally lightweight and improved the performance of four conventional classifiers. Also, an analysis of the contributions of electrodes from different scalp regions is presented, and a subset of channels is recommended. Sparse learning (SL) classifiers have exhibited strong classification performance in the literature. However, they are computationally expensive. To reduce the test-set execution times, a novel EEG classification pipeline consisting of a genetic-algorithm (GA) for channel selection and a dictionary-based SL module for classification, called GABSLEEG, is presented. Subject-specific channel selection was carried out, in which the channels are selected based on training data from the subject. Using the GA-recommended subset of EEG channels reduced the execution time by 60% whilst preserving classification performance. Although subject-specific channel selection is widely used in the literature, effective subject-independent channel selection, in which channels are detected using data from other subjects, is an ideal aim because it leads to lower training latency and reduces the number of electrodes needed. A novel convolutional neural network (CNN)-based subject-independent channels selection method is presented, called the integrated channel selection (ICS) layer. It performed on-a-par with or better than subject-specific channel selection. It was computationally efficient, operating 12-17 times faster than the GA channel selection module. The ICS layer method was versatile, performing well with two different CNN architectures and datasets.Developing effective signal processing for brain-computer interfaces (BCIs) and brain-machine interfaces (BMIs) involves factoring in three aspects of functionality: classification performance, execution time, and the number of data channels used. The contributions in this thesis are centered on these three issues. Contributions are focused on the classification of motor imagery (MI) data, which is generated during imagined movements. Typically, EEG time-series data is segmented for data augmentation or to mimic buffering that happens in an online BCI. A multi-segment decision fusion approach is presented, which takes consecutive temporal segments of EEG data, and uses decision fusion to boost classification performance. It was computationally lightweight and improved the performance of four conventional classifiers. Also, an analysis of the contributions of electrodes from different scalp regions is presented, and a subset of channels is recommended. Sparse learning (SL) classifiers have exhibited strong classification performance in the literature. However, they are computationally expensive. To reduce the test-set execution times, a novel EEG classification pipeline consisting of a genetic-algorithm (GA) for channel selection and a dictionary-based SL module for classification, called GABSLEEG, is presented. Subject-specific channel selection was carried out, in which the channels are selected based on training data from the subject. Using the GA-recommended subset of EEG channels reduced the execution time by 60% whilst preserving classification performance. Although subject-specific channel selection is widely used in the literature, effective subject-independent channel selection, in which channels are detected using data from other subjects, is an ideal aim because it leads to lower training latency and reduces the number of electrodes needed. A novel convolutional neural network (CNN)-based subject-independent channels selection method is presented, called the integrated channel selection (ICS) layer. It performed on-a-par with or better than subject-specific channel selection. It was computationally efficient, operating 12-17 times faster than the GA channel selection module. The ICS layer method was versatile, performing well with two different CNN architectures and datasets