10 research outputs found
A review of feature-based retinal image analysis
Retinal imaging is a fundamental tool in ophthalmic diagnostics. The potential use of retinal imaging within screening programs, with consequent need to analyze large numbers of images with high throughput, is pushing the digital image analysis field to find new solutions for the extraction of specific information from the retinal image. The aim of this review is to explore the latest progress in image processing techniques able to recognize specific retinal image features. and potential features of disease. In particular, this review aims to describe publically available retinal image databases, highlight different performance evaluators commonly used within the field, outline current approaches in feature-based retinal image analysis, and to map related trends. This review found two key areas to be addressed for the future development of automatic retinal image analysis: fundus image quality and the affect image processing may impose on relevant clinical information within the images. Performance evaluators of the algorithms reviewed are very promising, however absolute values are difficult to interpret when validating system suitability for use within clinical practice
Patch-based Denoising Algorithms for Single and Multi-view Images
In general, all single and multi-view digital images are captured using sensors, where they are often contaminated with noise, which is an undesired random signal. Such noise can also be produced during transmission or by lossy image compression. Reducing the noise and enhancing those images is among the fundamental digital image processing tasks. Improving the performance of image denoising methods, would greatly contribute to single or multi-view image processing techniques, e.g. segmentation, computing disparity maps, etc. Patch-based denoising methods have recently emerged as the state-of-the-art denoising approaches for various additive noise levels. This thesis proposes two patch-based denoising methods for single and multi-view images, respectively.
A modification to the block matching 3D algorithm is proposed for single image denoising. An adaptive collaborative thresholding filter is proposed which consists of a classification map and a set of various thresholding levels and operators. These are exploited when the collaborative hard-thresholding step is applied. Moreover, the collaborative Wiener filtering is improved by assigning greater weight when dealing with similar patches.
For the denoising of multi-view images, this thesis proposes algorithms that takes a pair of noisy images captured from two different directions at the same time (stereoscopic images). The structural, maximum difference or the singular value decomposition-based similarity metrics is utilized for identifying locations of similar search windows in the input images. The non-local means algorithm is adapted for filtering these noisy multi-view images.
The performance of both methods have been evaluated both quantitatively and qualitatively through a number of experiments using the peak signal-to-noise ratio and the mean structural similarity measure. Experimental results show that the proposed algorithm for single image denoising outperforms the original block matching 3D algorithm at various noise levels. Moreover, the proposed algorithm for multi-view image denoising can effectively reduce noise and assist to estimate more accurate disparity maps at various noise levels
ObjetivaciĂłn en el diagnĂłstico del sĂndrome de ojo seco. CorrelaciĂłn entre pruebas clĂnicas
Mantener la estructura y funciĂłn de la pelĂcula lagrimal es esencial para que pueda existir una correcta visiĂłn y confort ocular. El SĂndrome de Ojo Seco (SOS) es una enfermedad de la unidad funcional lagrimal con un diagnĂłstico controvertido cuya prevalencia ha aumentado mucho en los Ășltimos años, influyendo a la calidad visual y calidad de vida de las personas.
La principal finalidad del presente trabajo es objetivizar tests clĂnicos de diagnĂłstico de SOS mediante tĂ©cnicas semiautomĂĄticas y automĂĄticas de procesado de imagen y video, y desarrollar nuevos protocolos de medida, y asĂ como analizar las relaciones entre los diferentes tests. Para ello, tomando como referencia los principales mecanismos de la patogĂ©nesis del SĂndrome del ojo seco (la inestabilidad y la hiperosmolaridad lagrimal), la presente tesis se divide en tres partes principales: 1) un conjunto de cuatro estudios de la estabilidad de la pelĂcula lagrimal donde se realizan anĂĄlisis de diferentes parĂĄmetros de la misma y se valida un test automĂĄtico de medida; 2) un estudio para validar un test de medida semiautomĂĄtico para evaluar la altura del menisco lagrimal; y finalmente 3) un estudio donde se proponen y evalĂșan diferentes mĂ©todos de medida para el uso de un osmĂłmetro basado en el descenso del punto de congelaciĂłn aplicado a la pelĂcula lagrimal.
Los estudios de validaciĂłn demostraron resultados prometedores en los tests automĂĄticos y semiautomĂĄticos para el estudio de la estabilidad y cantidad de lĂĄgrima. Se encontraron ademĂĄs relaciones importantes de la estabilidad lagrimal con la cantidad de lĂpidos producidos a nivel palpebral, el ĂĄrea y evoluciĂłn de la velocidad de ruptura y la osmolaridad lagrimal, AsĂ mismo, los protocolos relacionados con el osmĂłmetro basado en el punto de congelaciĂłn, aunque presentan ciertas limitaciones, pueden aplicarse en lĂĄgrima con la diluciĂłn adecuad
Deep Learning Techniques for Medical Image Classification
A thesis submitted in partial fulfillment of the requirements for the degree of Doctor in Information Management, specialization in Information and Decision SystemsIn recent years, artificial intelligence (AI) has been applied in many fields to address complex and critical real-world tasks. Deep learning rises as a subfield of AI, where artificial neural networks (ANN) are used to map complicated functions, which can be challenging even for experienced users. One of the ANN variants is called convolutional neural network (CNN), which has shown great potential in image processing by providing state-of-the-art results for many significant image processing challenges. The medical field can significantly benefit from AI usage, especially in the medical image classification domain. In this doctoral dissertation, we applied different AI techniques to analyze medical images and to give the physicians a second opinion or reduce the time and effort needed for the image classification. Initially, we reviewed several studies that were published to discuss the transfer learning of CNNs. Afterward, we studied different hyperparameters that need to be optimized for CNNs to be trained accurately. Lastly, we proposed a novel CNN architecture to help in the classification of histopathology images
Deep Learning in Medical Image Analysis
The accelerating power of deep learning in diagnosing diseases will empower physicians and speed up decision making in clinical environments. Applications of modern medical instruments and digitalization of medical care have generated enormous amounts of medical images in recent years. In this big data arena, new deep learning methods and computational models for efficient data processing, analysis, and modeling of the generated data are crucially important for clinical applications and understanding the underlying biological process. This book presents and highlights novel algorithms, architectures, techniques, and applications of deep learning for medical image analysis
Seamless Multimodal Biometrics for Continuous Personalised Wellbeing Monitoring
Artificially intelligent perception is increasingly present in the lives of
every one of us. Vehicles are no exception, (...) In the near future, pattern
recognition will have an even stronger role in vehicles, as self-driving cars
will require automated ways to understand what is happening around (and within)
them and act accordingly. (...) This doctoral work focused on advancing
in-vehicle sensing through the research of novel computer vision and pattern
recognition methodologies for both biometrics and wellbeing monitoring. The
main focus has been on electrocardiogram (ECG) biometrics, a trait well-known
for its potential for seamless driver monitoring. Major efforts were devoted to
achieving improved performance in identification and identity verification in
off-the-person scenarios, well-known for increased noise and variability. Here,
end-to-end deep learning ECG biometric solutions were proposed and important
topics were addressed such as cross-database and long-term performance,
waveform relevance through explainability, and interlead conversion. Face
biometrics, a natural complement to the ECG in seamless unconstrained
scenarios, was also studied in this work. The open challenges of masked face
recognition and interpretability in biometrics were tackled in an effort to
evolve towards algorithms that are more transparent, trustworthy, and robust to
significant occlusions. Within the topic of wellbeing monitoring, improved
solutions to multimodal emotion recognition in groups of people and
activity/violence recognition in in-vehicle scenarios were proposed. At last,
we also proposed a novel way to learn template security within end-to-end
models, dismissing additional separate encryption processes, and a
self-supervised learning approach tailored to sequential data, in order to
ensure data security and optimal performance. (...)Comment: Doctoral thesis presented and approved on the 21st of December 2022
to the University of Port
Recommended from our members
Wind farm power output prediction based on machine learning recurrent neural networks
Scientists, investors and policy makers have become aware of the importance of providing near accurate prediction of renewable energy. This is why current studies show improvements in methodologies to provide more precise energy predictions. Wind energy is tied to variabilities of weather patterns, especially wind speeds, which are irregular in climates with erratic weather conditions. To predict wind power output, model technologies like autoregressive integrated moving average (ARIMA), variants of ARIMA, hybrid models involving ARIMA and artificial neural networks (ANN), Kalman filters and support vector regressions (SVR) have been applied for wind speed involving short, ultra-short, medium and long terms kind of predictions. ARIMA ensemble with ANN has shown better performance for short and ultra-short terms of two to three hours ahead. On the other hand, SVR, Kalman filters and ensemble of both has recorded good performance for medium-term kinds of wind speed predictions. Recently, neural networks in particular recurrent neural networks (RNN) have reported immense achievement in time series predictions particularly for medium and long-term. This is largely due to its retentive memory-mapping capabilities in fitting sequence in series. These capabilities are short-lived; when the sequence grows over time, the RNN tend to lose correlated information on back-propagation operations. This can lead to errors in the predicted potentials. Therefore, RNNs are exploited for enhanced wind-farm power output prediction. The main contribution of this research is the study of a model involving a combination of RNN regularisation methods using dropout and long short-term memory (LSTM) for wind-power output predictions. In this research, the regularisation method modifies and adapts to the stochastic nature of the wind and is optimised for the wind-farm power output (WFPO) prediction for up to 12-hours ahead â 72-timesteps. This algorithm implements a dropout method to suit the non-deterministic wind speed by applying LSTM to prevent RNN from overfitting. A demonstration for accuracy using the proposed method is performed on a 14-turbine wind farm with up to ten thousand wind samples for model training and five hundred for model validation and testing. The model out performs the ARIMA model with up to 90% accuracy and is expected to be applied to erratic weather condition, especially those observed in an off-shore wind farms
Visual image processing in various representation spaces for documentary preservation
This thesis establishes an advanced image processing framework for the enhancement and restoration of historical document images (HDI) in both intensity (gray-scale or color) and multispectral (MS) representation spaces. It provides three major contributions: 1) the binarization of gray-scale HDI; 2) the visual quality restoration of MS HDI; and 3) automatic reference data (RD) estimation for HDI binarization. HDI binarization is one of the enhancement techniques that produces bi-level information which is easy to handle using methods of analysis (OCR, for instance) and is less computationally costly to process than 256 levels of grey or color images. Restoring the visual quality of HDI in an MS representation space enhances their legibility, which is not possible with conventional intensity-based restoration methods, and HDI legibility is the main concern of historians and librarians wishing to transfer knowledge and revive ancient cultural heritage. The use of MS imaging systems is a new and attractive research trend in the field of numerical processing of cultural heritage documents. In this thesis, these systems are also used for automatically estimating more accurate RD to be used for the evaluation of HDI binarization algorithms in order to track the level of human performance.
Our first contribution, which is a new adaptive method of intensity-based binarization, is defined at the outset. Since degradation is present over document images, binarization methods must be adapted to handle degradation phenomena locally. Unfortunately, these methods are not effective, as they are not able to capture weak text strokes, which results in a deterioration of the performance of character recognition engines. The proposed approach first detects a subset of the most probable text pixels, which are used to locally estimate the parameters of the two classes of pixels (text and background), and then performs a simple maximum likelihood (ML) to locally classify the remaining pixels based on their class membership. To the best of our knowledge, this is the first time local parameter estimation and classification in an ML framework has been introduced for HDI binarization with promising results. A limitation of this method in the case with as the intensity-based methods of enhancement is that they are not effective in dealing with severely degraded HDI. Developing more advanced methods based on MS information would be a promising alternative avenue of research.
In the second contribution, a novel approach to the visual restoration of HDI is defined. The approach is aimed at providing end users (historians, librarians, etc..) with better HDI visualization, specifically; it aims to restore them from degradations, while keeping the original appearance of the HDI intact. Practically, this problem cannot be solved by conventional intensity-based restoration methods. To cope with these limitations, MS imaging is used to produce additional spectral images in the invisible light (infrared and ultraviolet) range, which gives greater contrast to objects in the documents. The inpainting-based variational framework proposed here for HDI restoration involves isolating the degradation phenomena in the infrared spectral images, and then inpainting them in the visible spectral images. The final color image to visualize is therefore reconstructed from the restored visible spectral images. To the best of our knowledge, this is the first time the inpainting technique has been introduced for MS HDI. The experimental results are promising, and our objective, in collaboration with the BAnQ (BibliothÚque et Archives nationales de Québec), is to push heritage documents into the public domain and build an intelligent engine for accessing them. It is useful to note that the proposed model can be extended to other MS-based image processing tasks.
Our third contribution is presented, which is to consider a new problem of RD (reference data) estimation, in order to show the importance of working with MS images rather than gray-scale or color images. RDs are mandatory for comparing different binarization algorithms, and they are usually generated by an expert. However, an expertâs RD is always subject to mislabeling and judgment errors, especially in the case of degraded data in restricted representation spaces (gray-scale or color images). In the proposed method, multiple RD generated by several experts are used in combination with MS HDI to estimate new, more accurate RD. The idea is to include the agreement of experts about labels and the multivariate data fidelity in a single Bayesian classification framework to estimate the a posteriori probability of new labels forming the final estimated RD. Our experiments show that estimated RD are more accurate than an expertâs RD. To the best of our knowledge, no similar work to combine binary data and multivariate data for the estimation of RD has been conducted
Texture Analysis of Late Gadolinium Enhanced Cardiac Magnetic Resonance Images for Characterizing Myocardial Fibrosis and Infarction
Le tiers de la population aux Ătats-Unis est affectĂ© par des cardiomyopathies. Lorsque le muscle du coeur, le myocarde, est altĂ©rĂ© par la maladie, la santĂ© du patient est dĂ©tĂ©riorĂ©e et peut mĂȘme entrainer la mort. Les maladies ischĂ©miques sont le rĂ©sultat dâartĂšres coronariennes bloquĂ©es (stĂ©nose), limitant lâapport sanguin vers le myocarde. Les cardiomyopathies non-ischĂ©miques sont les maladies dues Ă dâautres causes que des stĂ©noses. Les fibres de collagĂšne (fibrose) sâinfiltrent dans le muscle cardiaque dans le but de maintenir la forme et les fonctions cardiaques lorsque la structure du myocarde est affectĂ©e par des cardiomyopathies. Ce principe, nĂ©cessaire au fonctionnement du coeur en prĂ©sence de maladies, devient mal adaptĂ© et mĂšne Ă des altĂ©rations du myocarde aux consĂ©quences nĂ©gatives, par exemple lâaugmentation de la rigiditĂ© du myocarde. Une partie du diagnostic clinique lors de cardiomyopathies consiste Ă Ă©valuer la fibrose dans le coeur avec diffĂ©rentes modalitĂ©s dâimagerie. Les fibres de collagĂšne sâinfiltrent et sâaccumulent dans la zone extracellulaire du myocarde ou peuvent remplacer progressivement les cardiomyocytes compromises. Lâinfiltration de fibrose dans le myocarde peut possiblement ĂȘtre rĂ©versible, ce qui rend sa dĂ©tection particuliĂšrement importante pour le clinicien.
DiffĂ©rents tests diagnostiques existent pour aider le clinicien Ă Ă©tablir lâĂ©tat du patient en prĂ©sence de cardiomyopathies. Lâimagerie par rĂ©sonance magnĂ©tique (IRM) est une modalitĂ© dâimagerie qui offre une haute rĂ©solution pour la visualisation du myocarde. Parmi les sĂ©quences disponibles avec cette modalitĂ©, lâimagerie par rehaussement tardif (RT) augmente le contraste du signal existant entre les tissus sains et les tissues malades du myocarde. Il sâagit dâimages en pondĂ©ration T1 avec administration dâagent de contraste qui se propage dans la matrice extracellulaire et rĂ©sulte en un rehaussement du signal Ă cet endroit. Les images IRM RT permettent dâĂ©valuer la prĂ©sence et lâĂ©tendue des dommages au myocarde. Le clinicien peut Ă©valuer la sĂ©vĂ©ritĂ© des cardiomyopathies et poser un pronostique Ă lâaide de ces images. La dĂ©tection de fibrose diffuse dans ces images peut informer le clinicien sur lâĂ©tat du patient et est un important marqueur de cardiomyopathies.
Il est important dâĂ©tablir lâoccurrence de lâinfarctus en prĂ©sence de maladies ischĂ©miques. En effet, lâapproche interventionnelle varie selon que le clinicien fait face Ă une ischĂ©mie aigue ou chronique. Lors du diagnostic, Il serait donc bĂ©nĂ©fique de diffĂ©rencier les infarctus du myocarde aigu de ceux chronique. Ceci sâest avĂ©rĂ© difficile Ă lâaide des images IRM RT oĂč lâintensitĂ© du signal ou la taille des rĂ©gions sont similaires dans les deux types dâischĂ©mie.
Le but de la prĂ©sente thĂšse est donc dâappliquer les mĂ©thodes dâanalyse de texture Ă des images IRM RT afin de dĂ©tecter la prĂ©sence de fibrose diffuse dans le myocarde et de plus de dĂ©terminer lâĂąge de lâinfarctus du myocarde. La premiĂšre Ă©tude portait sur la dĂ©tection de fibrose diffuse dans le myocarde Ă lâaide de lâanalyse de texture appliquĂ©e Ă des images IRM RT afin dâĂ©tablir si un lien existe entre la variation du signal dâintensitĂ© et la structure sous-jacente du myocarde. La prĂ©sence de collagĂšne dans le myocarde augmente avec lâĂąge et nous avons utilisĂ© un modĂšle animal de rats jeunes et ĂągĂ©s. Nous avons fait une Ă©tude ex-vivo afin dâobtenir des images IRM RT de haute rĂ©solution avec absence de mouvement et ainsi permettre une comparaison des images avec des coupes histologiques des coeurs imagĂ©s. Des images IRM RT ont Ă©tĂ© acquises sur vingt-quatre animaux. Les coupes histologiques ont Ă©tĂ© traitĂ©es avec la mĂ©thode utilisant un marqueur âpicrosirius redâ qui donne une teinte rouge au collagĂšne. La quantification de la fibrose obtenue avec les images IRM RT a Ă©tĂ© comparĂ©e Ă la quantification obtenue sur les coupes histologiques. Ces quantifications ont de plus Ă©tĂ© comparĂ©es Ă lâanalyse de texture appliquĂ©e aux images IRM RT. La mĂ©thode de texture a Ă©tĂ© appliquĂ©e en crĂ©ant des cartes de texture basĂ©es sur la valeur de Contraste, cette mesure Ă©tant obtenue par des calculs statistiques sur la matrice de cooccurrence. Les rĂ©gions montrant une plus grande complexitĂ© de signal dâintensitĂ© sur les images IRM RT ont Ă©tĂ© rehaussĂ©es avec les cartes de textures. Un calcul de rĂ©gression linĂ©aire a permis dâĂ©tudier le lien entre les diffĂ©rentes mĂ©thodes de quantification. Nous avons trouvĂ©s que la quantification de fibrose dans le myocarde Ă lâaide de lâanalyse de texture appliquĂ©e sur des images IRM RT concordait avec le niveau de collagĂšne identifiĂ© avec les images IRM et avec les coupes histologiques. De plus, nous avons trouvĂ©s que lâanalyse de texture rehausse la prĂ©sence de fibrose diffuse dans le myocarde.
La seconde Ă©tude a pour but de discriminer les infarctus aigus du myocarde de ceux qui sont chroniques sur des images IRM RT de patients souffrant de cardiomyopathies ischĂ©miques. Vingt-deux patients ont subi lâimagerie IRM (12 avec infarctus aigu du myocarde et 12 avec infarctus chronique). Une segmentation des images a permis dâisoler les diffĂ©rentes zones du myocarde, soit la zone dâinfarctus, la zone grise au rebord de lâinfarctus et la zone du myocarde sain, dans les deux groupes de patients. Lâanalyse de texture sâest faite dans ces rĂ©gions en comparant les valeurs obtenues dans les deux groupes. Nous avons obtenu plus de valeurs de texture discriminantes dans la zone grise, en comparaison avec la rĂ©gion du myocarde sain, oĂč aucune valeur de texture nâĂ©tait significativement diffĂ©rente, et Ă la zone dâinfarctus, oĂč seule la valeur de texture statistique Moyenne Ă©tait diffĂ©rentes dans les deux groupes. La zone grise a dĂ©jĂ fait lâobjet dâĂ©tudes ayant Ă©tablis cette rĂ©gion comme composĂ©e de cardiomyocytes sains entremĂȘlĂ©s avec des fibres de collagĂšne. Notre Ă©tude montre que cette rĂ©gion peut exhiber des diffĂ©rences structurelles entre les infarctus aigus du myocarde et ceux qui sont chroniques et que lâanalyse de texture a rĂ©ussi Ă les dĂ©tecter.
LâĂ©tude de la prĂ©sence de collagĂšne dans le myocarde est importante pour le clinicien afin quâil puisse faire un diagnostic adĂ©quat du patient et pour quâil puisse faire un choix de traitement appropriĂ©. Nous avons montrĂ©s que lâanalyse de texture sur des images IRM RT de patients peut diffĂ©rencier et mĂȘme permettre la classification des ischĂ©mies aigues des ischĂ©mies chroniques, ce qui nâĂ©tait pas possible avec uniquement ce type dâimages. Nous avons de plus dĂ©montrĂ©s que lâanalyse de texture dâimages IRM RT permettait dâĂ©valuer le contenu de fibrose diffuse dans un modĂšle animal de haute rĂ©solution avec validation histologique. Une telle relation entre les rĂ©sultats dâanalyse de texture dâimages IRM RT et la structure sous-jacente du myocarde nâavait pas Ă©tĂ© Ă©tudiĂ©e dans la littĂ©rature.
Notre mĂ©thode pourra ĂȘtre amĂ©liorĂ©e en effectuant dâautres calculs statistiques sur la matrice de cooccurrence, en testant dâautres mĂ©thodes dâanalyse de texture et en appliquant notre mĂ©thode Ă de nouvelles sĂ©quences dâacquisition IRM, tel les images en pondĂ©ration T1. Dâautres amĂ©liorations possibles pourraient porter sur une Ă©valuation de matrice de cooccurrence avec voisinage circulaire suivant la forme du myocarde sur les tranches dâimages IRM RT. Plusieurs matrice de cooccurrence pourraient aussi ĂȘtre Ă©valuĂ©es en fonction de la position dans lâespace du voisinage afin dâintĂ©grer une composante directionnelle dans les calculs de texture. Dâautres Ă©tudes sont nĂ©cessaires afin dâĂ©tablir si une analyse de texture des images IRM RT pourrait diffĂ©rencier le stade de la fibrose pour un mĂȘme patient lors dâune Ă©tude de suivi. De mĂȘme, dâautres Ă©tudes sont nĂ©cessaires afin de valider lâutilisation de texture sur des scanners IRM diffĂ©rents. Ătablir lâĂąge de lâinfarctus du myocarde permettra de planifier les interventions thĂ©rapeutiques et dâĂ©valuer le pronostique pour le patient.----------ABSTRACT
A third of the United States population is affected by cardiomyopathies. Impairment of the heart muscle, the myocardium, puts the patientâs health at risk and could ultimately lead to death. Ischemic cardiomyopathies result from lack of blood (ischemia) reaching the myocardium from blocked coronary arteries. Non-ischemic cardiomyopathies are diseases from other etiology than ischemia. Often collagen fibers infiltrate the heart (fibrosis), as a means to maintain its shape and function in the presence of disease that affects the myocardial cellular structure. This necessary phenomenon ultimately becomes maladaptive and results in the heartâs impairment. Part of the heartâs involvement in disease can be assessed through the analysis of myocardial fibrosis. Cardiomyopathy diagnosis involves the investigation of the presence of myocardial fibrosis, either infiltrative, defined as the increased presence of collagen protein in the extracellular space, or replacement fibrosis, when collagen fibers progressively replace diseased cardiomyocytes. The infiltrative fibrosis is believed to be reversible in some instances and consequently, myocardial fibrosis analysis has decisional impact on the interventional procedure that would benefit the health of the patient. The heart contracts and relaxes as it pumps blood to the rest of the body, an action directly impaired by myocardial damage. Any myocardial involvement should be assessed by the clinician to identify the severity of the myocardial damage, establish a prognosis and plan therapeutic intervention.
Different diagnostic tests are required to image the myocardium and help the clinician in the diagnostic process. Cardiac magnetic resonance (CMR) imaging has emerged as a high resolution imaging modality that offers precise structural analysis of the heart. Among the different imaging sequences available with CMR, late gadolinium enhancement (LGE) shows the myocardium and enhances any impairments that may exist with the use of a contrast agent. It is a T1-weighted image with extracellular contrast agent (CA) administration. Increased signal intensity in the infarct scar is created from the CA dynamics. LGE CMR imaging offers information on the scar size and its location. The clinician can estimate the severity of the disease and establish prognosis with LGE CMR images.
In ischemic cardiomyopathy, it is important to establish the occurrence of the infarction and know the age of the infarct to plan surgical intervention. Differentiation of acute from chronic MI is therefore important in the diagnostic process. In LGE CMR the level of signal intensity or the size of infarction are both similar in acute or in chronic MI. It has therefore been challenging to distinguish acute MI from chronic MI scars with LGE CMR images alone.
The aim of this thesis was to investigate texture analysis of LGE CMR images to determine if acute MI could be distinguished from chronic MI and to detect increased presence of diffuse myocardial fibrosis in the myocardium. The first study was performed to investigate if texture analysis of LGE CMR images could detect variations in the presence of diffuse myocardial fibrosis and if the underlying myocardial structure could be related to the texture measures. Collagen content increased with aging and we used an animal model of young versus old rat. An ex-vivo animal model was necessary to allow for higher image resolution in LGE CMR images and to perform validation of our texture measures with histology images. Twenty four animals were scanned for LGE CMR images and texture analysis was applied to the heart images. Histology slices were stained with picrosirius red and collagen fibers were isolated based on their color content. LGE CMR quantification was compared to histological slices of the heart stained with the picrosirius red method. Texture analysis of LGE CMR images was also compared to the original LGE CMR image quantification and to histology. Texture analysis was done by creating contrast texture maps extracted from Haralickâs gray level co-occurrence matrix (GLCM). Regions of complex signal intensity combination were enhanced in LGE CMR images and in contrast texture maps. Regression analysis was performed to assess the level of agreement between the different analysis methods. We found that LGE CMR images could assess the different levels of collagen content in the different aged animal model, and that moreover texture analysis enhanced those differences. The location of enhancement from texture analysis images corresponded to location of increased collagen content in the old compared to the young rat hearts. Histological validation was shown for texture analysis applied to LGE CMR images to assess myocardial fibrosis.
Our second study aimed at discriminating acute versus chronic MI from LGE CMR patient images alone through the use of texture analysis. Twenty two patients who had LGE CMR images were included in our study (12 acute and 12 chronic MI). Regional segmentation was performed and texture features were compared in those regions between both groups of patient. Texture analysis resulted in significantly different values between the two groups. More specifically the peri-infarct zone had the most number of discriminative features compared to the remote myocardium which had none and to the infarct core where only the mean features was significantly different. The border zone has been shown to be composed of healthy cardiomyocytes intermingled with the scarâs collagen fibers. Our study indicates this region might exhibit structural differences in the myocardium in acute from chronic MI patients that texture analysis of LGE CMR images can detect.
Characterization of myocardial collagen content is important while clinicians analyze the state of the patient since it influences the course of action required to treat cardiomyopathies. LGE CMR images have been thoroughly used and validated to characterize focal myocardial scar, however it was limited in characterizing the age of infarction or quantifying diffuse collagen content. We have shown texture analysis of LGE CMR images alone can differentiate and even classify, acute from chronic MI patients, which was not previously possible. Characterization of myocardial infarction according to age will prove important in planning therapeutic interventions in clinical practice. Moreover, we have established texture analysis as a means to characterize the myocardium and detect variation in fibrosis content from high resolution LGE CMR images with histology validation. To our knowledge, such a relation between texture analysis of LGE CMR images and the underlying myocardial structure had not been done previously.
Improvements could be done to our method, as we can increase the number of texture features that were analyzed from the GLCM, include other texture analysis methods such as the run-length matrix, and apply our method to other CMR imaging sequences such as T1 mapping. Adapting the GLCM to the heart could also be investigated, such as considering circular GLCM computation to consider the round shape of the myocardium in the short axis LGE CMR image slices. Directional GLCM could also be computed individually and analyzed for any myocardial or collagen fiber orientation indication. Further analysis is also required to establish if texture analysis could differentiate the age of MI in the same individual through a follow-up study. The measures of texture analysis from LGE CMR images obtained through different CMR scanners remains to be investigated as well. Knowing the age of infarct and evaluating the presence of diffuse myocardial fibrosis will help the clinician plan therapeutic interventions and establish a prognosis for the patient
Design, Development and Implementation Framework for a Postgraduate Non-Surgical Aesthetics Curriculum
Non-surgical aesthetics (NSA) procedures are primarily performed in private clinics away from traditional teaching hospital settings, establishing structured training and education in these procedures during residency training has been challenging. The objective of this study was to design and develop an evidence-based postgraduate curriculum in non-surgical aesthetics. It necessitated determining the current state of training and education for NSA procedures in postgraduate clinical education. Following a design-based research approach, a subsequent systematic literature review and a cross-sectional global-needs assessment study established the need for such a curriculum. Subsequent literature reviews and series of global Delphi studies have informed and guided the design and development of the conceptual framework, core curriculum content and finally, the implementation framework to facilitate the smooth delivery of the programme. The research also incorporated pilot studies for teaching methodology, assessment strategies like âobjective structured practical examination (OSPE) and objective structured clinical examination (OSCE)â, which has shown to be very effective. The conceptual framework for curriculum design and development in NSA emerged from the global Delphi study. The conceptual framework is anchored on critical thinking and uses enquiry-based learning to develop information mastery, skills, and values and attitude. Moreover, relevant threshold concepts guided the construction of learning outcomes mapped against the core curriculum. The finding of this study is a crucial first step in bringing an evidence-based structure to training and education in NSA. This thesis will act as a âblueprintâ for the policymakers and program directors while curating a postgraduate programme in NSA