82 research outputs found
Frequency Recognition in SSVEP-based BCI using Multiset Canonical Correlation Analysis
Canonical correlation analysis (CCA) has been one of the most popular methods
for frequency recognition in steady-state visual evoked potential (SSVEP)-based
brain-computer interfaces (BCIs). Despite its efficiency, a potential problem
is that using pre-constructed sine-cosine waves as the required reference
signals in the CCA method often does not result in the optimal recognition
accuracy due to their lack of features from the real EEG data. To address this
problem, this study proposes a novel method based on multiset canonical
correlation analysis (MsetCCA) to optimize the reference signals used in the
CCA method for SSVEP frequency recognition. The MsetCCA method learns multiple
linear transforms that implement joint spatial filtering to maximize the
overall correlation among canonical variates, and hence extracts SSVEP common
features from multiple sets of EEG data recorded at the same stimulus
frequency. The optimized reference signals are formed by combination of the
common features and completely based on training data. Experimental study with
EEG data from ten healthy subjects demonstrates that the MsetCCA method
improves the recognition accuracy of SSVEP frequency in comparison with the CCA
method and other two competing methods (multiway CCA (MwayCCA) and phase
constrained CCA (PCCA)), especially for a small number of channels and a short
time window length. The superiority indicates that the proposed MsetCCA method
is a new promising candidate for frequency recognition in SSVEP-based BCIs
Computational strategies for single-cell multi-omics integration
Single-cell omics technologies are currently solving biological and medical problems that earlier have remained elusive, such as discovery of new cell types, cellular differentiation trajectories and communication networks across cells and tissues. Current advances especially in single-cell multi-omics hold high potential for breakthroughs by integration of multiple different omics layers. To pair with the recent biotechnological developments, many computational approaches to process and analyze single-cell multi-omics data have been proposed. In this review, we first introduce recent developments in single-cell multi-omics in general and then focus on the available data integration strategies. The integration approaches are divided into three categories: early, intermediate, and late data integration. For each category, we describe the underlying conceptual principles and main characteristics, as well as provide examples of currently available tools and how they have been applied to analyze single-cell multi-omics data. Finally, we explore the challenges and prospective future directions of single-cell multi-omics data integration, including examples of adopting multi-view analysis approaches used in other disciplines to single-cell multi-omics.</p
kLog: A Language for Logical and Relational Learning with Kernels
We introduce kLog, a novel approach to statistical relational learning.
Unlike standard approaches, kLog does not represent a probability distribution
directly. It is rather a language to perform kernel-based learning on
expressive logical and relational representations. kLog allows users to specify
learning problems declaratively. It builds on simple but powerful concepts:
learning from interpretations, entity/relationship data modeling, logic
programming, and deductive databases. Access by the kernel to the rich
representation is mediated by a technique we call graphicalization: the
relational representation is first transformed into a graph --- in particular,
a grounded entity/relationship diagram. Subsequently, a choice of graph kernel
defines the feature space. kLog supports mixed numerical and symbolic data, as
well as background knowledge in the form of Prolog or Datalog programs as in
inductive logic programming systems. The kLog framework can be applied to
tackle the same range of tasks that has made statistical relational learning so
popular, including classification, regression, multitask learning, and
collective classification. We also report about empirical comparisons, showing
that kLog can be either more accurate, or much faster at the same level of
accuracy, than Tilde and Alchemy. kLog is GPLv3 licensed and is available at
http://klog.dinfo.unifi.it along with tutorials
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