SATELLITE-BASED CHARACTERIZATION OF CROP TYPE AND PRODUCTIVITY OF AGROECOSYSTEMS: CASE STUDIES IN NORTHEAST CHINA, SOUTHERN AFRICA, AND CONTERMINOUS USA

Agroecosystem, or agricultural ecosystems, is the important anthropogenic ecosystem to meet the human demand for food, fiber, and feed, and it covers approximately 40-50% of the earth’s land surface. Accurate estimates of agricultural land use and land cover and Gross Primary Production (GPP) are indispensable for global food security and understanding variations in the terrestrial carbon budgets. This dissertation aimed to strengthen the capacities of remote sensing to produce the high-quality products of crop type maps and primary productivity on large regional scales. In chapter 2, we designed simple algorithms to identify paddy rice of two different phenological phases (flooding/transplanting and ripening) at regional scales using 30-m multi-temporal Landsat images. Sixteen Landsat images from 2010 - 2012 were used to generate the paddy rice map in the Sanjiang Plain, northeast China - one of the intensive paddy rice cultivation regions in Northern Asia. The user and producer accuracies of paddy rice on the resultant Landsat-based paddy rice map were 90% and 94%, respectively, and was an improvement over the paddy rice dataset derived through visual interpretation and digitalization on the fine-resolution satellite images and traditional agricultural census data. Chapter 3 evaluated the capacities of the temporal MODIS vegetation indices and the satellite-based Vegetation Photosynthesis Model (VPM) to describe phenology and model the seasonal dynamics of GPP for savanna woodlands in Southern Africa on the site level. The results showed that the VPM-based GPP estimates tracked the seasonal dynamics and interannual variation of GPP estimated from eddy covariance measurements at flux tower sites. This study suggests that the VPM is a valuable tool for estimating GPP of semi-arid and semi-humid savanna woodland ecosystems in Southern Africa. Chapter 4 assessed the accuracies of air temperature and downward shortwave radiation of the North America Regional Reanalysis (NARR) by the National Centers for Environmental Prediction (NCEP), and evaluated impacts of the accuracies of regional climate inputs on the VPM-based GPP estimates for U.S. Midwest cropland. The results implied that the bias of NARR downward shortwave radiation introduced significant uncertainties into the VPM-based GPP estimates, suggesting that more accurate surface radiation datasets are needed to estimate primary production of terrestrial ecosystems at regional and global scales. Chapter 5 presented independent and complementary analyses of the impact of 2012 flash drought on productivity in the U.S. Midwest using multiple sources of evidences, i.e., in-situ AmeriFlux CO2 data, satellite observations of vegetation indices and solar-induced chlorophyll fluorescence (SIF), and scaled ecosystem modeling. The results showed that phenological activities of all biomes advanced 1-2 weeks earlier in 2012 compared to other years of 2010-2014, and the drought threatened the U.S. Midwest agroecosystems. The growth of grassland/prairie and cropland was suppressed from June and it didn’t recover until the end of the growing season. As the frequency and severity of droughts have been predicted to increase in future, this study provides better insights into the impacts of flash droughts on vegetation productivity and carbon cycling of major biomes in the U.S. Midwest

Monitoring the Sustainable Intensification of Arable Agriculture:the Potential Role of Earth Observation

Sustainable intensification (SI) has been proposed as a possible solution to the conflicting problems of meeting projected increases in food demand and preserving environmental quality. SI would provide necessary production increases while simultaneously reducing or eliminating environmental degradation, without taking land from competing demands. An important component of achieving these aims is the development of suitable methods for assessing the temporal variability of both the intensification and sustainability of agriculture. Current assessments rely on traditional data collection methods that produce data of limited spatial and temporal resolution. Earth Observation (EO) provides a readily accessible, long-term dataset with global coverage at various spatial and temporal resolutions. In this paper we demonstrate how EO could significantly contribute to SI assessments, providing opportunities to quantify agricultural intensity and environmental sustainability. We review an extensive body of research on EO-based methods to assess multiple indicators of both agricultural intensity and environmental sustainability. To date these techniques have not been combined to assess SI; here we identify the opportunities and initial steps required to achieve this. In this context, we propose the development of a set of essential sustainable intensification variables (ESIVs) that could be derived from EO data

Improved atmospheric modelling of the oasis-desert system in Central Asia using WRF with actual satellite products

Because of the use of outdated terrestrial datasets, regional climate models (RCMs) have a limited ability to accurately simulate weather and climate conditions over heterogeneous oasis-desert systems, especially near large mountains. Using actual terrestrial datasets from satellite products for RCMs is the only possible solution to the limitation; however, it is impractical for long-period simulations due to the limited satellite products available before 2000 and the extremely time- and labor-consuming processes involved. In this study, we used the Weather Research and Forecasting (WRF) model with observed estimates of land use (LU), albedo, Leaf Area Index (LAI), and green Vegetation Fraction (VF) datasets from satellite products to examine which terrestrial datasets have a great impact on simulating water and heat conditions over heterogeneous oasis-desert systems in the northern Tianshan Mountains. Five simulations were conducted for 1-31 July in both 2010 and 2012. The decrease in the root mean squared error and increase in the coefficient of determination for the 2 m temperature (T2), humidity (RH), latent heat flux (LE), and wind speed (WS) suggest that these datasets improve the performance of WRF in both years; in particular, oasis effects are more realistically simulated. Using actual satellite-derived fractional vegetation coverage data has a much greater effect on the simulation of T2, RH, and LE than the other parameters, resulting in mean error correction values of 62%, 87%, and 92%, respectively. LU data is the primary parameter because it strongly influences other secondary land surface parameters, such as LAI and albedo. We conclude that actual LU and VF data should be used in the WRF for both weather and climate simulations

Earth Observations for Addressing Global Challenges

"Earth Observations for Addressing Global Challenges" presents the results of cutting-edge research related to innovative techniques and approaches based on satellite remote sensing data, the acquisition of earth observations, and their applications in the contemporary practice of sustainable development. Addressing the urgent tasks of adaptation to climate change is one of the biggest global challenges for humanity. As His Excellency António Guterres, Secretary-General of the United Nations, said, "Climate change is the defining issue of our time—and we are at a defining moment. We face a direct existential threat." For many years, scientists from around the world have been conducting research on earth observations collecting vital data about the state of the earth environment. Evidence of the rapidly changing climate is alarming: according to the World Meteorological Organization, the past two decades included 18 of the warmest years since 1850, when records began. Thus, Group on Earth Observations (GEO) has launched initiatives across multiple societal benefit areas (agriculture, biodiversity, climate, disasters, ecosystems, energy, health, water, and weather), such as the Global Forest Observations Initiative, the GEO Carbon and GHG Initiative, the GEO Biodiversity Observation Network, and the GEO Blue Planet, among others. The results of research that addressed strategic priorities of these important initiatives are presented in the monograph

Estimating the crop leaf area index using hyperspectral remote sensing

AbstractThe leaf area index (LAI) is an important vegetation parameter, which is used widely in many applications. Remote sensing techniques are known to be effective but inexpensive methods for estimating the LAI of crop canopies. During the last two decades, hyperspectral remote sensing has been employed increasingly for crop LAI estimation, which requires unique technical procedures compared with conventional multispectral data, such as denoising and dimension reduction. Thus, we provide a comprehensive and intensive overview of crop LAI estimation based on hyperspectral remote sensing techniques. First, we compare hyperspectral data and multispectral data by highlighting their potential and limitations in LAI estimation. Second, we categorize the approaches used for crop LAI estimation based on hyperspectral data into three types: approaches based on statistical models, physical models (i.e., canopy reflectance models), and hybrid inversions. We summarize and evaluate the theoretical basis and different methods employed by these approaches (e.g., the characteristic parameters of LAI, regression methods for constructing statistical predictive models, commonly applied physical models, and inversion strategies for physical models). Thus, numerous models and inversion strategies are organized in a clear conceptual framework. Moreover, we highlight the technical difficulties that may hinder crop LAI estimation, such as the “curse of dimensionality” and the ill-posed problem. Finally, we discuss the prospects for future research based on the previous studies described in this review

Crop growth and yield monitoring in smallholder agricultural systems:a multi-sensor data fusion approach

Smallholder agricultural systems are highly vulnerable to production risks posed by the intensification of extreme weather events such as drought and flooding, soil degradation, pests, lack of access to agricultural inputs, and political instability. Monitoring the spatial and temporal variability of crop growth and yield is crucial for farm management, national-level food security assessments, and famine early warning. However, agricultural monitoring is difficult in fragmented agricultural landscapes because of scarcity and uncertainty of data to capture small crop fields. Traditional pre- and post-harvest crop monitoring and yield estimation based on fieldwork is costly, slow, and can be unrepresentative of heterogeneous agricultural landscapes as found in smallholder systems in sub-Saharan Africa. Devising accurate and timely crop phenology detection and yield estimation methods can improve our understanding of the status of crop production and food security in these regions.Satellite-based Earth observation (EO) data plays a key role in monitoring the spatial and temporal variability of crop growth and yield over large areas. The small field sizes and variability in management practices in fragmented landscapes requires high spatial and high temporal resolution EO data. This thesis develops and demonstrates methods to investigate the spatiotemporal variability of crop phenology detection and yield estimation using Landsat and MODIS data fusion in smallholder agricultural systems in the Lake Tana sub-basin of Ethiopia. The overall aim is to further broaden the application of multi-sensor EO data for crop growth monitoring in smallholder agricultural systems.The thesis addressed two important aspects of crop monitoring applications of EO data: phenology detection and yield estimation. First, the ESTARFM data fusion workflow was modified based on local knowledge of crop calendars and land cover to improve crop phenology monitoring in fragmented agricultural landscapes. The approach minimized data fusion uncertainties in predicting temporal reflectance change of crops during the growing season and the reflectance value of fused data was comparable to the original Landsat image reserved for validation. The main sources of uncertainty in data fusion are the small field size and abrupt crop growth changes between the base andviiprediction dates due to flooding, weeding, fertiliser application, and harvesting. The improved data fusion approach allowed us to determine crop phenology and estimate LAI more accurately than both the standard ESTARFM data fusion method and when using MODIS data without fusion. We also calibrated and validated a dynamic threshold phenology detection method using maize and rice crop sowing and harvest date information. Crop-specific phenology determined from data fusion minimized the mismatch between EO-derived phenometrics and the actual crop calendar. The study concluded that accurate phenology detection and LAI estimation from Landsat–MODIS data fusion demonstrates the feasibility of crop growth monitoring using multi-sensor data fusion in fragmented and persistently cloudy agricultural landscapes.Subsequently, the validated data fusion and phenology detection methods were implemented to understand crop phenology trends from 2000 to 2020. These trends are often less understood in smallholder agricultural systems due to the lack of high spatial resolution data to distinguish crops from the surrounding natural vegetation. Trends based on Landsat–MODIS fusion were compared with those detected using MODIS alone to assess the contribution of data fusion to discern crop phenometric change. Landsat and MODIS fusion discerned crop and environment-specific trends in the magnitude and direction of crop phenology change. The results underlined the importance of high spatial and temporal resolution EO data to capture environment-specific crop phenology change, which has implications in designing adaptation and crop management practices in these regions.The second important aspect of the crop monitoring problem addressed in this thesis is improving crop yield estimation in smallholder agricultural systems. The large input requirements of crop models and lack of spatial information about the heterogeneous crop-growing environment and agronomic management practices are major challenges to the accurate estimation of crop yield. We assimilated leaf area index (LAI) and phenology information from Landsat–MODIS fusion in a crop model (simple algorithm for yield estimation: SAFY) to obtain reasonably reliable crop yield estimates. The SAFY model is sensitive to the spatial and temporal resolution of the calibration input LAI, phenology information, and the effective light use efficiency (ELUE) parameter, which needs accurate field level inputs during modelviiioptimization. Assimilating fused EO-based phenology information minimized model uncertainty and captured the large management and environmental variation in smallholder agricultural systems.In the final research chapter of the thesis, we analysed the contribution of assimilating LAI at different phenological stages. The frequency and timing of LAI observations influences the retrieval accuracy of the assimilating LAI in crop growth simulation models. The use of (optical) EO data to estimate LAI is constrained by limited repeat frequency and cloud cover, which can reduce yield estimation accuracy. We evaluated the relative contribution of EO observations at different crop growth stages for accurate calibration of crop model parameters. We found that LAI between jointing and grain filling has the highest contribution to SAFY yield estimation and that the distribution of LAI during the key development stages was more useful than the frequency of LAI to improve yield estimation. This information on the optimal timing of EO data assimilation is important to develop better in-season crop yield forecasting in smallholder systems