BronchoX : bronchoscopy exploration software for biopsy intervention planning

Altres: ACCIO Tecniospring TECSPR17-1-0045Virtual bronchoscopy (VB) is a non-invasive exploration tool for intervention planning and navigation of possible pulmonary lesions (PLs). A VB software involves the location of a PL and the calculation of a route, starting from the trachea, to reach it. The selection of a VB software might be a complex process, and there is no consensus in the community of medical software developers in which is the best-suited system to use or framework to choose. The authors present Bronchoscopy Exploration (BronchoX), a VB software to plan biopsy interventions that generate physician-readable instructions to reach the PLs. The authors' solution is open source, multiplatform, and extensible for future functionalities, designed by their multidisciplinary research and development group. BronchoX is a compound of different algorithms for segmentation, visualisation, and navigation of the respiratory tract. Performed results are a focus on the test the effectiveness of their proposal as an exploration software, also to measure its accuracy as a guiding system to reach PLs. Then, 40 different virtual planning paths were created to guide physicians until distal bronchioles. These results provide a functional software for BronchoX and demonstrate how following simple instructions is possible to reach distal lesions from the trachea

Observation-driven adaptive differential evolution and its application to accurate and smooth bronchoscope three-dimensional motion tracking

© 2015 Elsevier B.V. This paper proposes an observation-driven adaptive differential evolution algorithm that fuses bronchoscopic video sequences, electromagnetic sensor measurements, and computed tomography images for accurate and smooth bronchoscope three-dimensional motion tracking. Currently an electromagnetic tracker with a position sensor fixed at the bronchoscope tip is commonly used to estimate bronchoscope movements. The large tracking error from directly using sensor measurements, which may be deteriorated heavily by patient respiratory motion and the magnetic field distortion of the tracker, limits clinical applications. How to effectively use sensor measurements for precise and stable bronchoscope electromagnetic tracking remains challenging. We here exploit an observation-driven adaptive differential evolution framework to address such a challenge and boost the tracking accuracy and smoothness. In our framework, two advantageous points are distinguished from other adaptive differential evolution methods: (1) the current observation including sensor measurements and bronchoscopic video images is used in the mutation equation and the fitness computation, respectively and (2) the mutation factor and the crossover rate are determined adaptively on the basis of the current image observation. The experimental results demonstrate that our framework provides much more accurate and smooth bronchoscope tracking than the state-of-the-art methods. Our approach reduces the tracking error from 3.96 to 2.89. mm, improves the tracking smoothness from 4.08 to 1.62. mm, and increases the visual quality from 0.707 to 0.741

3D object reconstruction from uncalibrated images using an off-the-shelf camera

Three-dimensional (3D) objects reconstruction using just bi-dimensional (2D) images has been a major research topic in Computer Vision. However, it is still a hard problem to address, when automation, speed and precision are required and/or the objects have complex shapes or image properties. In this paper, we compare two Active Computer Vision methods frequently used for the 3D reconstruction of objects from image sequences, acquired with a single off-the-shelf CCD camera: Structure From Motion (SFM) and Generalized Voxel Coloring (GVC). SFM recovers the 3D shape of an object based on the relative motion involved, while VC is a volumetric method that uses photo-consistency measures to build the required 3D model. Both methods considered do not impose any kind of restrictions on the relative motion involved

Image-Guided Abdominal Surgery and Therapy Delivery

ABSTRACT Image-Guided Surgery has become the standard of care in intracranial neurosurgery providing more exact resections while minimizing damage to healthy tissue. Moving that process to abdominal organs presents additional challenges in the form of image segmentation, image to physical space registration, organ motion and deformation. In this paper, we present methodologies and results for addressing these challenges in two specific organs: the liver and the kidney

Sistema de control y alimentación para un robot ápodo modular e hiper redundante

En este trabajo se estudian las tecnologías necesarias para el desarrollo de un robot ápodo modular destinado a la exploración de entornos cilíndricos (en especial el intestino grueso) mediante actuadores basados en polímeros electroactivos. Se ha planteado la instrumentación necesaria para este robot, incluyendo un sistema de visión estereoscópica, giroscopio, sensores de fuerza lateral y temperatura y humedad.Departamento de Ciencias de los Materiales e Ingeniería Metalúrgica, Expresión Gráfica en la Ingeniería, Ingeniería Cartográfica, Geodesia y Fotogrametría, Ingeniería Mecánica e Ingeniería de los Procesos de FabricaciónGrado en Ingeniería en Electrónica Industrial y Automátic

Re-localisation of microscopic lesions in their macroscopic context for surgical instrument guidance

Optical biopsies interrogate microscopic structure in vivo with a 2mm diameter miniprobe placed in contact with the tissue for detection of lesions and assessment of disease progression. After detection, instruments are guided to the lesion location for a new optical interrogation, or for treatment, or for tissue excision during the same or a future examination. As the optical measurement can be considered as a point source of information at the surface of the tissue of interest, accurate guidance can be difficult. A method for re-localisation of the sampling point is, therefore, needed. The method presented in this thesis has been developed for biopsy site re-localisation during a surveillance examination of Barrett’s Oesophagus. The biopsy site, invisible macroscopically during conventional endoscopy, is re-localised in the target endoscopic image using epipolar lines derived from its locations given by the tip of the miniprobe visible in a series of reference endoscopic images. A confidence region can be drawn around the relocalised biopsy site from its uncertainty that is derived analytically. This thesis also presents a method to improve the accuracy of the epipolar lines derived for the biopsy site relocalisation using an electromagnetic tracking system. Simulations and tests on patient data identified the cases when the analytical uncertainty is a good approximation of the confidence region and showed that biopsy sites can be re-localised with accuracies better than 1mm. Studies on phantom and on porcine excised tissue demonstrated that an electromagnetic tracking system contributes to more accurate epipolar lines and re-localised biopsy sites for an endoscope displacement greater than 5mm. The re-localisation method can be applied to images acquired during different endoscopic examinations. It may also be useful for pulmonary applications. Finally, it can be combined with a Magnetic Resonance scanner which can steer cells to the biopsy site for tissue treatment