Capacity Bounded Grammars and Petri Nets

A capacity bounded grammar is a grammar whose derivations are restricted by assigning a bound to the number of every nonterminal symbol in the sentential forms. In the paper the generative power and closure properties of capacity bounded grammars and their Petri net controlled counterparts are investigated

Automating the transformation-based analysis of visual languages

The final publication is available at Springer via http://dx.doi.org/10.1007/s00165-009-0114-yWe present a novel approach for the automatic generation of model-to-model transformations given a description of the operational semantics of the source language in the form of graph transformation rules. The approach is geared to the generation of transformations from Domain-Specific Visual Languages (DSVLs) into semantic domains with an explicit notion of transition, like for example Petri nets. The generated transformation is expressed in the form of operational triple graph grammar rules that transform the static information (initial model) and the dynamics (source rules and their execution control structure). We illustrate these techniques with a DSVL in the domain of production systems, for which we generate a transformation into Petri nets. We also tackle the description of timing aspects in graph transformation rules, and its analysis through their automatic translation into Time Petri netsWork sponsored by the Spanish Ministry of Science and Innovation, project METEORIC (TIN2008-02081/TIN) and by the Canadian Natural Sciences and Engineering Research Council (NSERC)

Petri net controlled grammars

Different types of regulated grammars have been introduced in order to supplement shortcomings of context-free grammars in applications preserving their elegant mathematical properties. However, the rapid developments in present day industry, biology, and other areas challenge to deal with various tasks which need suitable tools for their modelling and investigation. We propose Petri net controlled grammars as models for representing and analyzing of metabolic pathways in living cells where Petri nets are responsible for the structure and communication of the pathways, and grammars represent biochemical processes. On the other hand, the control by Petri nets has also theoretical interest: it extends possibilities to introduce and investigate concurrent control mechanisms in formal language theory. The thesis introduces various variants of Petri net controlled grammars using different types of Petri nets and investigates their mathematical properties such as computational power and closure properties.Los diferentes tipos de gramáticas con reescritura regulada han sido introducidas para complementar las deficiencias de las gramáticas libres del contexto en las aplicaciones, preservando sus propiedades matemáticas. Por otro lado, la rápida evolución la biología, y otras áreas actuales supone un reto para tratar de las tareas varias que necesitan las herramientas adecuadas para la elaboración de modelos e investigación. Proponemos gramáticas controladas por redes de Petri como modelos para representar y analizar los procesos bioquímicos en las células vivas donde redes de Petri son responsables de la estructura, y gramáticas representan los procesos generativos. Además, el control de redes de Petri también tiene interés teórico: amplía las posibilidades de investigar los mecanismos de control concurrente en la teoría de lenguajes formales. La tesis presenta distintas variantes de gramáticas controladas por redes de Petri e investiga sus propiedades matemáticas

Place-Labeled Petri Net Controlled Grammars

A place-labeled Petri net (pPN) controlled grammar is a context-free grammar equipped with a Petri net and a function which maps places of the net to the productions of the grammar. The language consists of all terminal strings that can be obtained by simultaneously applying of the rules of multisets which are the images of the sets of the input places of transitions in a successful occurrence sequence of the Petri net. In this paper, we study the generative power and structural properties of pPN controlled grammars. We show that pPN controlled grammars have the same generative power as matrix grammars. Moreover, we prove that for each pPN controlled grammar, we can construct an equivalent place-labeled ordinary net controlled grammar

Net processes correspond to derivation processes in graph grammars

AbstractThe aim of this paper is to compare the running behaviour of Petri nets, given by firing sequences and processes, with derivations and derivation processes in graph grammars. In a first step, Petri nets are simulated by graph grammars so that each firing in a net corresponds exactly to a direct derivation in the simulating graph grammar. In a second step the non-sequential behaviour of nets described by net processes is related to the non-sequential behaviour of graph grammars given by derivation processes. a one-to-one correppondence can be established between the processes on a Petri net and the complete conflict-free processes in the graph grammar simulating the net. This adds a new piece of evidence substantiating the close relationship between net and graph grammar theory

On Languages Accepted by P/T Systems Composed of joins

Recently, some studies linked the computational power of abstract computing systems based on multiset rewriting to models of Petri nets and the computation power of these nets to their topology. In turn, the computational power of these abstract computing devices can be understood by just looking at their topology, that is, information flow. Here we continue this line of research introducing J languages and proving that they can be accepted by place/transition systems whose underlying net is composed only of joins. Moreover, we investigate how J languages relate to other families of formal languages. In particular, we show that every J language can be accepted by a log n space-bounded non-deterministic Turing machine with a one-way read-only input. We also show that every J language has a semilinear Parikh map and that J languages and context-free languages (CFLs) are incomparable

Search and Result Presentation in Scientific Workflow Repositories

We study the problem of searching a repository of complex hierarchical workflows whose component modules, both composite and atomic, have been annotated with keywords. Since keyword search does not use the graph structure of a workflow, we develop a model of workflows using context-free bag grammars. We then give efficient polynomial-time algorithms that, given a workflow and a keyword query, determine whether some execution of the workflow matches the query. Based on these algorithms we develop a search and ranking solution that efficiently retrieves the top-k grammars from a repository. Finally, we propose a novel result presentation method for grammars matching a keyword query, based on representative parse-trees. The effectiveness of our approach is validated through an extensive experimental evaluation

Safety verification of asynchronous pushdown systems with shaped stacks

In this paper, we study the program-point reachability problem of concurrent pushdown systems that communicate via unbounded and unordered message buffers. Our goal is to relax the common restriction that messages can only be retrieved by a pushdown process when its stack is empty. We use the notion of partially commutative context-free grammars to describe a new class of asynchronously communicating pushdown systems with a mild shape constraint on the stacks for which the program-point coverability problem remains decidable. Stacks that fit the shape constraint may reach arbitrary heights; further a process may execute any communication action (be it process creation, message send or retrieval) whether or not its stack is empty. This class extends previous computational models studied in the context of asynchronous programs, and enables the safety verification of a large class of message passing programs

Analysis of Petri Nets with Context-Free Structure Changes

Structure-changing Petri nets are Petri nets with transition replacement rules. In this paper, we investigate the restricted class of structure-changing workflow nets and show that two different reachability properties (concrete and abstract reachability) and word membership in the language of labelled firing sequences are decidable, while a language-based notion of correctness (containment of the language of labelled firing sequences in a regular language) is undecidable