A Future for Integrated Diagnostic Helping

International audienceMedical systems used for exploration or diagnostic helping impose high applicative constraints such as real time image acquisition and displaying. A large part of computing requirement of these systems is devoted to image processing. This chapter provides clues to transfer consumers computing architecture approaches to the benefit of medical applications. The goal is to obtain fully integrated devices from diagnostic helping to autonomous lab on chip while taking into account medical domain specific constraints.This expertise is structured as follows: the first part analyzes vision based medical applications in order to extract essentials processing blocks and to show the similarities between consumer’s and medical vision based applications. The second part is devoted to the determination of elementary operators which are mostly needed in both domains. Computing capacities that are required by these operators and applications are compared to the state-of-the-art architectures in order to define an efficient algorithm-architecture adequation. Finally this part demonstrates that it's possible to use highly constrained computing architectures designed for consumers handled devices in application to medical domain. This is based on the example of a high definition (HD) video processing architecture designed to be integrated into smart phone or highly embedded components. This expertise paves the way for the industrialisation of intergraded autonomous diagnostichelping devices, by showing the feasibility of such systems. Their future use would also free the medical staff from many logistical constraints due the deployment of today’s cumbersome systems

Lessons learned from the design of a mobile multimedia system in the Moby Dick project

Recent advances in wireless networking technology and the exponential development of semiconductor technology have engendered a new paradigm of computing, called personal mobile computing or ubiquitous computing. This offers a vision of the future with a much richer and more exciting set of architecture research challenges than extrapolations of the current desktop architectures. In particular, these devices will have limited battery resources, will handle diverse data types, and will operate in environments that are insecure, dynamic and which vary significantly in time and location. The research performed in the MOBY DICK project is about designing such a mobile multimedia system. This paper discusses the approach made in the MOBY DICK project to solve some of these problems, discusses its contributions, and accesses what was learned from the project

Design and management of image processing pipelines within CPS : Acquired experience towards the end of the FitOptiVis ECSEL Project

Cyber-Physical Systems (CPSs) are dynamic and reactive systems interacting with processes, environment and, sometimes, humans. They are often distributed with sensors and actuators, characterized for being smart, adaptive, predictive and react in real-time. Indeed, image- and video-processing pipelines are a prime source for environmental information for systems allowing them to take better decisions according to what they see. Therefore, in FitOptiVis, we are developing novel methods and tools to integrate complex image- and video-processing pipelines. FitOptiVis aims to deliver a reference architecture for describing and optimizing quality and resource management for imaging and video pipelines in CPSs both at design- and run-time. The architecture is concretized in low-power, high-performance, smart components, and in methods and tools for combined design-time and run-time multi-objective optimization and adaptation within system and environment constraints.Peer reviewe

A unified approach for managing heterogeneous processing elements on FPGAs

FPGA designs do not typically include all available processing elements, e.g., LUTs, DSPs and embedded cores. Additional work is required to manage their different implementations and behaviour, which can unbalance parallel pipelines and complicate development. In this paper we introduce a novel management architecture to unify heterogeneous processing elements into compute pools. A pool formed of E processing elements, each implementing the same function, serves D parallel function calls. A call-and-response approach to computation allows for different processing element implementations, connections, latencies and non-deterministic behaviour. Our rotating scheduler automatically arbitrates access to processing elements, uses greatly simplified routing, and scales linearly with D parallel accesses to the compute pool. Processing elements can easily be added to improve performance, or removed to reduce resource use and routing, facilitating higher operating frequencies. Migrating to larger or smaller FPGAs thus comes at a known performance cost. We assess our framework with a range of neural network activation functions (ReLU, LReLU, ELU, GELU, sigmoid, swish, softplus and tanh) on the Xilinx Alveo U280

Spectral element methods: Algorithms and architectures

Spectral element methods are high-order weighted residual techniques for partial differential equations that combine the geometric flexibility of finite element methods with the rapid convergence of spectral techniques. Spectral element methods are described for the simulation of incompressible fluid flows, with special emphasis on implementation of spectral element techniques on medium-grained parallel processors. Two parallel architectures are considered: the first, a commercially available message-passing hypercube system; the second, a developmental reconfigurable architecture based on Geometry-Defining Processors. High parallel efficiency is obtained in hypercube spectral element computations, indicating that load balancing and communication issues can be successfully addressed by a high-order technique/medium-grained processor algorithm-architecture coupling