On the Implementation of the Probabilistic Logic Programming Language ProbLog

The past few years have seen a surge of interest in the field of probabilistic logic learning and statistical relational learning. In this endeavor, many probabilistic logics have been developed. ProbLog is a recent probabilistic extension of Prolog motivated by the mining of large biological networks. In ProbLog, facts can be labeled with probabilities. These facts are treated as mutually independent random variables that indicate whether these facts belong to a randomly sampled program. Different kinds of queries can be posed to ProbLog programs. We introduce algorithms that allow the efficient execution of these queries, discuss their implementation on top of the YAP-Prolog system, and evaluate their performance in the context of large networks of biological entities.Comment: 28 pages; To appear in Theory and Practice of Logic Programming (TPLP

Efficient Groundness Analysis in Prolog

Boolean functions can be used to express the groundness of, and trace grounding dependencies between, program variables in (constraint) logic programs. In this paper, a variety of issues pertaining to the efficient Prolog implementation of groundness analysis are investigated, focusing on the domain of definite Boolean functions, Def. The systematic design of the representation of an abstract domain is discussed in relation to its impact on the algorithmic complexity of the domain operations; the most frequently called operations should be the most lightweight. This methodology is applied to Def, resulting in a new representation, together with new algorithms for its domain operations utilising previously unexploited properties of Def -- for instance, quadratic-time entailment checking. The iteration strategy driving the analysis is also discussed and a simple, but very effective, optimisation of induced magic is described. The analysis can be implemented straightforwardly in Prolog and the use of a non-ground representation results in an efficient, scalable tool which does not require widening to be invoked, even on the largest benchmarks. An extensive experimental evaluation is givenComment: 31 pages To appear in Theory and Practice of Logic Programmin

Using parametric set constraints for locating errors in CLP programs

This paper introduces a framework of parametric descriptive directional types for constraint logic programming (CLP). It proposes a method for locating type errors in CLP programs and presents a prototype debugging tool. The main technique used is checking correctness of programs w.r.t. type specifications. The approach is based on a generalization of known methods for proving correctness of logic programs to the case of parametric specifications. Set-constraint techniques are used for formulating and checking verification conditions for (parametric) polymorphic type specifications. The specifications are expressed in a parametric extension of the formalism of term grammars. The soundness of the method is proved and the prototype debugging tool supporting the proposed approach is illustrated on examples. The paper is a substantial extension of the previous work by the same authors concerning monomorphic directional types.Comment: 64 pages, To appear in Theory and Practice of Logic Programmin

Exploiting Term Hiding to Reduce Run-time Checking Overhead

One of the most attractive features of untyped languages is the flexibility in term creation and manipulation. However, with such power comes the responsibility of ensuring the correctness of these operations. A solution is adding run-time checks to the program via assertions, but this can introduce overheads that are in many cases impractical. While static analysis can greatly reduce such overheads, the gains depend strongly on the quality of the information inferred. Reusable libraries, i.e., library modules that are pre-compiled independently of the client, pose special challenges in this context. We propose a technique which takes advantage of module systems which can hide a selected set of functor symbols to significantly enrich the shape information that can be inferred for reusable libraries, as well as an improved run-time checking approach that leverages the proposed mechanisms to achieve large reductions in overhead, closer to those of static languages, even in the reusable-library context. While the approach is general and system-independent, we present it for concreteness in the context of the Ciao assertion language and combined static/dynamic checking framework. Our method maintains the full expressiveness of the assertion language in this context. In contrast to other approaches it does not introduce the need to switch the language to a (static) type system, which is known to change the semantics in languages like Prolog. We also study the approach experimentally and evaluate the overhead reduction achieved in the run-time checks.Comment: 26 pages, 10 figures, 2 tables; an extension of the paper version accepted to PADL'18 (includes proofs, extra figures and examples omitted due to space reasons

The Parma Polyhedra Library: Toward a Complete Set of Numerical Abstractions for the Analysis and Verification of Hardware and Software Systems

Since its inception as a student project in 2001, initially just for the handling (as the name implies) of convex polyhedra, the Parma Polyhedra Library has been continuously improved and extended by joining scrupulous research on the theoretical foundations of (possibly non-convex) numerical abstractions to a total adherence to the best available practices in software development. Even though it is still not fully mature and functionally complete, the Parma Polyhedra Library already offers a combination of functionality, reliability, usability and performance that is not matched by similar, freely available libraries. In this paper, we present the main features of the current version of the library, emphasizing those that distinguish it from other similar libraries and those that are important for applications in the field of analysis and verification of hardware and software systems.Comment: 38 pages, 2 figures, 3 listings, 3 table

Probabilistic Logic Programming with Beta-Distributed Random Variables

We enable aProbLog---a probabilistic logical programming approach---to reason in presence of uncertain probabilities represented as Beta-distributed random variables. We achieve the same performance of state-of-the-art algorithms for highly specified and engineered domains, while simultaneously we maintain the flexibility offered by aProbLog in handling complex relational domains. Our motivation is that faithfully capturing the distribution of probabilities is necessary to compute an expected utility for effective decision making under uncertainty: unfortunately, these probability distributions can be highly uncertain due to sparse data. To understand and accurately manipulate such probability distributions we need a well-defined theoretical framework that is provided by the Beta distribution, which specifies a distribution of probabilities representing all the possible values of a probability when the exact value is unknown.Comment: Accepted for presentation at AAAI 201

Abstract verification and debugging of constraint logic programs

The technique of Abstract Interpretation [13] has allowed the development of sophisticated program analyses which are provably correct and practical. The semantic approximations produced by such analyses have been traditionally applied to optimization during program compilation. However, recently, novel and promising applications of semantic approximations have been proposed in the more general context of program verification and debugging [3],[10],[7]