Query Modification in Object-oriented Database Federation

We discuss the modification of queries against an integrated view in a federation of object-oriented databases. We present a generalisation of existing algorithms for simple global query processing that works for arbitrarily defined integration classes. We then extend this algorithm to deal with object-oriented features such as queries involving path expressions and nesting. We show how properties of the OO-style of modelling relationships through object references can be exploited to reduce the number of subqueries necessary to evaluate such querie

Myriad: Design and implementation of a federated database prototype

This paper describes our experiences in the design and implementation of Myriad, and in the project management. Special emphasis is given to discussing design alternatives and their impact on Myriad. This paper also presents the software engineering principles and the project management techniques we used in developing Myriad and the lessons we learned. We believe these lessons would be useful for practitioners who wish to develop a similar syste

An extensible view system for supporting the integration and interoperation of heterogeneous, autonomous, and distributed database management systems

In this thesis the problem of integrating heterogeneous, autonomous and distributed database management systems (DBMSs) is addressed. To provide a solution, we have developed an approach, a design method, and a view system. Our approach is based on the invention of the abstract view constructs that have uniform and stable representations for supporting semantic relativism and distributed abstraction modeling. Our design method applies object-oriented techniques and software engineering concepts to manage the system complexity. Our view system has been constructed upon established experience with the development of large-scale distributed systems in a distributed object infrastructure provided by the Common Object Request Broker Architecture (CORBA). The scope of our research identifies the goals of Project Zeus in which we have created the Zeus View Mechanism ( ZVM) as the theoretical foundation of our approach. The notion of frameworks has been introduced as part of our design methodology to promote code/design reuse and enhance the portability/extensibility of the architectural design. A multidatabase system, the Zeus Multidatabase System ( ZMS), has provided a test bed for our concept. Project Zeus has exciting prospects. The foundation established in this research has created new directions in multidatabase research and will have a significant impact on future integration and interoperation technologies

An object query language for multimedia federations

The Fischlar system provides a large centralised repository of multimedia files. As expansion is difficult in centralised systems and as different user groups have a requirement to define their own schemas, the EGTV (Efficient Global Transactions for Video) project was established to examine how the distribution of this database could be managed. The federated database approach is advocated where global schema is designed in a top-down approach, while all multimedia and textual data is stored in object-oriented (O-O) and object-relational (0-R) compliant databases. This thesis investigates queries and updates on large multimedia collections organised in the database federation. The goal of this research is to provide a generic query language capable of interrogating global and local multimedia database schemas. Therefore, a new query language EQL is defined to facilitate the querying of object-oriented and objectrelational database schemas in a database and platform independent manner, and acts as a canonical language for database federations. A new canonical language was required as the existing query language standards (SQL: 1999 and OQL) axe generally incompatible and translation between them is not trivial. EQL is supported with a formally defined object algebra and specified semantics for query evaluation. The ability to capture and store metadata of multiple database schemas is essential when constructing and querying a federated schema. Therefore we also present a new platform independent metamodel for specifying multimedia schemas stored in both object-oriented and object-relational databases. This metadata information is later used for the construction of a global schemas, and during the evaluation of local and global queries. Another important feature of any federated system is the ability to unambiguously define database schemas. The schema definition language for an EGTV database federation must be capable of specifying both object-oriented and object-relational schemas in the database independent format. As XML represents a standard for encoding and distributing data across various platforms, a language based upon XML has been developed as a part of our research. The ODLx (Object Definition Language XML) language specifies a set of XMLbased structures for defining complex database schemas capable of representing different multimedia types. The language is fully integrated with the EGTV metamodel through which ODLx schemas can be mapped to 0-0 and 0-R databases

A polygen model for heterogeneous database systems : the source tagging perspective

Includes bibliographical references (p. 26-29).Supported in part by MIT's Financial Service Research Center, MIT's Center for Information Systems Research, and MIT's LCS Digital Library Project.Y. Richard Wang, Stuart E. Madnick

A cooperative framework for molecular biology database integration using image object selection.

The theme and the concept of 'Molecular Biology Database Integration’ and the problems associated with this concept initiated the idea for this Ph.D research. The available technologies facilitate to analyse the data independently and discretely but it fails to integrate the data resources for more meaningful information. This along with the integration issues created the scope for this Ph.D research. The research has reviewed the 'database interoperability' problems and it has suggested a framework for integrating the molecular biology databases. The framework has proposed to develop a cooperative environment to share information on the basis of common purpose for the molecular biology databases. The research has also reviewed other implementation and interoperability issues for laboratory based, dedicated and target specific database. The research has addressed the following issues: - diversity of molecular biology databases schemas, schema constructs and schema implementation -multi-database query using image object keying -database integration technologies using context graph - automated navigation among these databases This thesis has introduced a new approach for database implementation. It has introduced an interoperable component database concept to initiate multidatabase query on gene mutation data. A number of data models have been proposed for gene mutation data which is the basis for integrating the target specific component database to be integrated with the federated information system. The proposed data models are: data models for genetic trait analysis, classification of gene mutation data, pathological lesion data and laboratory data. The main feature of this component database is non-overlapping attributes and it will follow non-redundant integration approach as explained in the thesis. This will be achieved by storing attributes which will not have the union or intersection of any attributes that exist in public domain molecular biology databases. Unlike data warehousing technique, this feature is quite unique and novel. The component database will be integrated with other biological data sources for sharing information in a cooperative environment. This/involves developing new tools. The thesis explains the role of these new tools which are: meta data extractor, mapping linker, query generator and result interpreter. These tools are used for a transparent integration without creating any global schema of the participating databases. The thesis has also established the concept of image object keying for multidatabase query and it has proposed a relevant algorithm for matching protein spot in gel electrophoresis image. An object spot in gel electrophoresis image will initiate the query when it is selected by the user. It matches the selected spot with other similar spots in other resource databases. This image object keying method is an alternative to conventional multidatabase query which requires writing complex SQL scripts. This method also resolve the semantic conflicts that exist among molecular biology databases. The research has proposed a new framework based on the context of the web data for interactions with different biological data resources. A formal description of the resource context is described in the thesis. The implementation of the context into Resource Document Framework (RDF) will be able to increase the interoperability by providing the description of the resources and the navigation plan for accessing the web based databases. A higher level construct is developed (has, provide and access) to implement the context into RDF for web interactions. The interactions within the resources are achieved by utilising an integration domain to extract the required information with a single instance and without writing any query scripts. The integration domain allows to navigate and to execute the query plan within the resource databases. An extractor module collects elements from different target webs and unify them as a whole object in a single page. The proposed framework is tested to find specific information e.g., information on Alzheimer's disease, from public domain biology resources, such as, Protein Data Bank, Genome Data Bank, Online Mendalian Inheritance in Man and local database. Finally, the thesis proposes further propositions and plans for future work

Open issues in semantic query optimization in relational DBMS

After two decades of research into Semantic Query Optimization (SQO) there is clear agreement as to the efficacy of SQO. However, although there are some experimental implementations there are still no commercial implementations. We first present a thorough analysis of research into SQO. We identify three problems which inhibit the effective use of SQO in Relational Database Management Systems(RDBMS). We then propose solutions to these problems and describe first steps towards the implementation of an effective semantic query optimizer for relational databases