A scalar projection and angle based evolutionary algorithm for many-objective optimization problems

In decomposition-based multi-objective evolutionary algorithms, the setting of search directions (or weight vectors), and the choice of reference points (i.e., the ideal point or the nadir point) in scalarizing functions, are of great importance to the performance of the algorithms. This paper proposes a new decomposition-based many-objective optimizer by simultaneously using adaptive search directions and two reference points. For each parent, binary search directions are constructed by using its objective vector and the above two reference points. Each individual is simultaneously evaluated on two fitness functions—which are motivated by scalar projections—that are deduced to be the differences between two penalty-based boundary intersection (PBI) functions, and two inverted PBI functions, respectively. Solutions with the best value on each fitness function are emphasized. Moreover, an angle-based elimination procedure is adopted to select diversified solutions for the next generation. The use of adaptive search directions aims at effectively handling problems with irregular Pareto-optimal fronts, and the philosophy of using the ideal and nadir points simultaneously is to take advantages of the complementary effects of the two points when handling problems with either concave or convex fronts. The performance of the proposed approach is compared with seven state-of-the-art multi-/many-objective evolutionary algorithms on 32 test problems with up to 15 objectives. It is shown by the experimental results that the proposed algorithm is flexible when handling problems with different types of Pareto-optimal fronts, obtaining promising results regarding both the quality of the returned solution set and the efficiency of the new algorithm

Opportunistic data collection and routing in segmented wireless sensor networks

La surveillance régulière des opérations dans les aires de manoeuvre (voies de circulation et pistes) et aires de stationnement d'un aéroport est une tâche cruciale pour son fonctionnement. Les stratégies utilisées à cette fin visent à permettre la mesure des variables environnementales, l'identification des débris (FOD) et l'enregistrement des statistiques d'utilisation de diverses sections de la surface. Selon un groupe de gestionnaires et contrôleurs d'aéroport interrogés, cette surveillance est un privilège des grands aéroports en raison des coûts élevés d'acquisition, d'installation et de maintenance des technologies existantes. Les moyens et petits aéroports se limitent généralement à la surveillance de quelques variables environnementales et des FOD effectuée visuellement par l'homme. Cette dernière activité impose l'arrêt du fonctionnement des pistes pendant l'inspection. Dans cette thèse, nous proposons une solution alternative basée sur les réseaux de capteurs sans fil (WSN) qui, contrairement aux autres méthodes, combinent les propriétés de faible coût d'installation et maintenance, de déploiement rapide, d'évolutivité tout en permettant d'effectuer des mesures sans interférer avec le fonctionnement de l'aéroport. En raison de la superficie d'un aéroport et de la difficulté de placer des capteurs sur des zones de transit, le WSN se composerait d'une collection de sous-réseaux isolés les uns des autres et du puits. Pour gérer cette segmentation, notre proposition s'appuie sur l'utilisation opportuniste des véhicules circulants dans l'aéroport considérés alors comme un type spécial de nœud appelé Mobile Ubiquitous LAN Extension (MULE) chargé de collecter les données des sous-réseaux le long de son trajet et de les transférer vers le puits. L'une des exigences pour le déploiement d'un nouveau système dans un aéroport est qu'il cause peu ou pas d'interruption des opérations régulières. C'est pourquoi l'utilisation d'une approche opportuniste basé sur des MULE est privilégiée dans cette thèse. Par opportuniste, nous nous référons au fait que le rôle de MULE est joué par certains des véhicules déjà existants dans un aéroport et effectuant leurs déplacements normaux. Et certains nœuds des sous- réseaux exploiteront tout moment de contact avec eux pour leur transmettre les données à transférer ensuite au puits. Une caractéristique des MULEs dans notre application est qu'elles ont des trajectoires structurées (suivant les voies de circulation dans l'aéroport), en ayant éventuellement un contact avec l'ensemble des nœuds situés le long de leur trajet (appelés sous-puits). Ceci implique la nécessité de définir une stratégie de routage dans chaque sous-réseau, capable d'acheminer les données collectées des nœuds vers les sous-puits et de répartir les paquets de données entre eux afin que le temps en contact avec la MULE soit utilisé le plus efficacement possible. Dans cette thèse, nous proposons un protocole de routage remplissant ces fonctions. Le protocole proposé est nommé ACME (ACO-based routing protocol for MULE-assisted WSNs). Il est basé sur la technique d'Optimisation par Colonies de Fourmis. ACME permet d'assigner des nœuds à des sous-puits puis de définir les chemins entre eux, en tenant compte de la minimisation de la somme des longueurs de ces chemins, de l'équilibrage de la quantité de paquets stockés par les sous-puits et du nombre total de retransmissions. Le problème est défini comme une tâche d'optimisation multi-objectif qui est résolue de manière distribuée sur la base des actions des nœuds dans un schéma collaboratif. Nous avons développé un environnement de simulation et effectué des campagnes de calculs dans OMNeT++ qui montrent les avantages de notre protocole en termes de performances et sa capacité à s'adapter à une grande variété de topologies de réseaux.The regular monitoring of operations in both movement areas (taxiways and runways) and non-movement areas (aprons and aircraft parking spots) of an airport, is a critical task for its functioning. The set of strategies used for this purpose include the measurement of environmental variables, the identification of foreign object debris (FOD), and the record of statistics of usage for diverse sections of the surface. According to a group of airport managers and controllers interviewed by us, the wide monitoring of most of these variables is a privilege of big airports due to the high acquisition, installation and maintenance costs of most common technologies. Due to this limitation, smaller airports often limit themselves to the monitoring of environmental variables at some few spatial points and the tracking of FOD performed by humans. This last activity requires stopping the functioning of the runways while the inspection is conducted. In this thesis, we propose an alternative solution based on Wireless Sensor Network (WSN) which, unlike the other methods/technologies, combines the desirable properties of low installation and maintenance cost, scalability and ability to perform measurements without interfering with the regular functioning of the airport. Due to the large extension of an airport and the difficulty of placing sensors over transit areas, the WSN might result segmented into a collection of subnetworks isolated from each other and from the sink. To overcome this problem, our proposal relies on a special type of node called Mobile Ubiquitous LAN Extension (MULE), able to move over the airport surface, gather data from the subnetworks along its way and eventually transfer it to the sink. One of the main demands for the deployment of any new system in an airport is that it must have little or no interference with the regular operations. This is why the use of an opportunistic approach for the transfer of data from the subnetworks to the MULE is favored in this thesis. By opportunistic we mean that the role of MULE will be played by some of the typical vehicles already existing in an airport doing their normal displacements, and the subnetworks will exploit any moment of contact with them to forward data to the sink. A particular characteristic of the MULEs in our application is that they move along predefined structured trajectories (given by the layout of the airport), having eventual contact with the set of nodes located by the side of the road (so-called subsinks). This implies the need for a data routing strategy to be used within each subnetwork, able to lead the collected data from the sensor nodes to the subsinks and distribute the data packets among them so that the time in contact with the MULE is used as efficiently as possible. In this thesis, we propose a routing protocol which undertakes this task. Our proposed protocol is named ACME, standing for ACO-based routing protocol for MULE-assisted WSNs. It is founded on the well known Ant Colony Optimization (ACO) technique. The main advantage of ACO is its natural fit to the decentralized nature of WSN, which allows it to perform distributed optimizations (based on local interactions) leading to remarkable overall network performance. ACME is able to assign sensor nodes to subsinks and generate the corresponding multi-hop paths while accounting for the minimization of the total path length, the total subsink imbalance and the total number of retransmissions. The problem is defined as a multi-objective optimization task which is resolved in a distributed manner based on actions of the sensor nodes acting in a collaborative scheme. We conduct a set of computational experiments in the discrete event simulator OMNeT++ which shows the advantages of our protocol in terms of performance and its ability to adapt to a variety of network topologie

Mammography

In this volume, the topics are constructed from a variety of contents: the bases of mammography systems, optimization of screening mammography with reference to evidence-based research, new technologies of image acquisition and its surrounding systems, and case reports with reference to up-to-date multimodality images of breast cancer. Mammography has been lagged in the transition to digital imaging systems because of the necessity of high resolution for diagnosis. However, in the past ten years, technical improvement has resolved the difficulties and boosted new diagnostic systems. We hope that the reader will learn the essentials of mammography and will be forward-looking for the new technologies. We want to express our sincere gratitude and appreciation?to all the co-authors who have contributed their work to this volume

Enhanced clustering analysis pipeline for performance analysis of parallel applications

Clustering analysis is widely used to stratify data in the same cluster when they are similar according to the specific metrics. We can use the cluster analysis to group the CPU burst of a parallel application, and the regions on each process in-between communication calls or calls to the parallel runtime. The resulting clusters obtained are the different computational trends or phases that appear in the application. These clusters are useful to understand the behavior of the computation part of the application and focus the analyses on those that present performance issues. Although density-based clustering algorithms are a powerful and efficient tool to summarize this type of information, their traditional user-guided clustering methodology has many shortcomings and deficiencies in dealing with the complexity of data, the diversity of data structures, high-dimensionality of data, and the dramatic increase in the amount of data. Consequently, the majority of DBSCAN-like algorithms have weaknesses to handle high-dimensionality and/or Multi-density data, and they are sensitive to their hyper-parameter configuration. Furthermore, extracting insight from the obtained clusters is an intuitive and manual task. To mitigate these weaknesses, we have proposed a new unified approach to replace the user-guided clustering with an automated clustering analysis pipeline, called Enhanced Cluster Identification and Interpretation (ECII) pipeline. To build the pipeline, we propose novel techniques including Robust Independent Feature Selection, Feature Space Curvature Map, Organization Component Analysis, and hyper-parameters tuning to feature selection, density homogenization, cluster interpretation, and model selection which are the main components of our machine learning pipeline. This thesis contributes four new techniques to the Machine Learning field with a particular use case in Performance Analytics field. The first contribution is a novel unsupervised approach for feature selection on noisy data, called Robust Independent Feature Selection (RIFS). Specifically, we choose a feature subset that contains most of the underlying information, using the same criteria as the Independent component analysis. Simultaneously, the noise is separated as an independent component. The second contribution of the thesis is a parametric multilinear transformation method to homogenize cluster densities while preserving the topological structure of the dataset, called Feature Space Curvature Map (FSCM). We present a new Gravitational Self-organizing Map to model the feature space curvature by plugging the concepts of gravity and fabric of space into the Self-organizing Map algorithm to mathematically describe the density structure of the data. To homogenize the cluster density, we introduce a novel mapping mechanism to project the data from the non-Euclidean curved space to a new Euclidean flat space. The third contribution is a novel topological-based method to study potentially complex high-dimensional categorized data by quantifying their shapes and extracting fine-grain insights from them to interpret the clustering result. We introduce our Organization Component Analysis (OCA) method for the automatic arbitrary cluster-shape study without an assumption about the data distribution. Finally, to tune the DBSCAN hyper-parameters, we propose a new tuning mechanism by combining techniques from machine learning and optimization domains, and we embed it in the ECII pipeline. Using this cluster analysis pipeline with the CPU burst data of a parallel application, we provide the developer/analyst with a high-quality SPMD computation structure detection with the added value that reflects the fine grain of the computation regions.El análisis de conglomerados se usa ampliamente para estratificar datos en el mismo conglomerado cuando son similares según las métricas específicas. Nosotros puede usar el análisis de clúster para agrupar la ráfaga de CPU de una aplicación paralela y las regiones en cada proceso intermedio llamadas de comunicación o llamadas al tiempo de ejecución paralelo. Los clusters resultantes obtenidos son las diferentes tendencias computacionales o fases que aparecen en la solicitud. Estos clusters son útiles para entender el comportamiento de la parte de computación del aplicación y centrar los análisis en aquellos que presenten problemas de rendimiento. Aunque los algoritmos de agrupamiento basados en la densidad son una herramienta poderosa y eficiente para resumir este tipo de información, su La metodología tradicional de agrupación en clústeres guiada por el usuario tiene muchas deficiencias y deficiencias al tratar con la complejidad de los datos, la diversidad de estructuras de datos, la alta dimensionalidad de los datos y el aumento dramático en la cantidad de datos. En consecuencia, el La mayoría de los algoritmos similares a DBSCAN tienen debilidades para manejar datos de alta dimensionalidad y/o densidad múltiple, y son sensibles a su configuración de hiperparámetros. Además, extraer información de los clústeres obtenidos es una forma intuitiva y tarea manual Para mitigar estas debilidades, hemos propuesto un nuevo enfoque unificado para reemplazar el agrupamiento guiado por el usuario con un canalización de análisis de agrupamiento automatizado, llamada canalización de identificación e interpretación de clúster mejorada (ECII). para construir el tubería, proponemos técnicas novedosas que incluyen la selección robusta de características independientes, el mapa de curvatura del espacio de características, Análisis de componentes de la organización y ajuste de hiperparámetros para la selección de características, homogeneización de densidad, agrupación interpretación y selección de modelos, que son los componentes principales de nuestra canalización de aprendizaje automático. Esta tesis aporta cuatro nuevas técnicas al campo de Machine Learning con un caso de uso particular en el campo de Performance Analytics. La primera contribución es un enfoque novedoso no supervisado para la selección de características en datos ruidosos, llamado Robust Independent Feature. Selección (RIFS).Específicamente, elegimos un subconjunto de funciones que contiene la mayor parte de la información subyacente, utilizando el mismo criterios como el análisis de componentes independientes. Simultáneamente, el ruido se separa como un componente independiente. La segunda contribución de la tesis es un método de transformación multilineal paramétrica para homogeneizar densidades de clústeres mientras preservando la estructura topológica del conjunto de datos, llamado Mapa de Curvatura del Espacio de Características (FSCM). Presentamos un nuevo Gravitacional Mapa autoorganizado para modelar la curvatura del espacio característico conectando los conceptos de gravedad y estructura del espacio en el Algoritmo de mapa autoorganizado para describir matemáticamente la estructura de densidad de los datos. Para homogeneizar la densidad del racimo, introducimos un mecanismo de mapeo novedoso para proyectar los datos del espacio curvo no euclidiano a un nuevo plano euclidiano espacio. La tercera contribución es un nuevo método basado en topología para estudiar datos categorizados de alta dimensión potencialmente complejos mediante cuantificando sus formas y extrayendo información detallada de ellas para interpretar el resultado de la agrupación. presentamos nuestro Método de análisis de componentes de organización (OCA) para el estudio automático de forma arbitraria de conglomerados sin una suposición sobre el distribución de datos.Postprint (published version

【研究分野別】シーズ集 [英語版]

[英語版

ECOLOGICAL IMPACTS OF THE INVASIVE AND CRYPTIC BARBU BARBUS (L.) (PISCES:CYPRINIDAE)

Invasive species are among the principal causes of community and ecosystem integrity loss worldwide and freshwaters fishes are among the most threatened and introduced species. The invasive riverine fish Barbus barbus was used in this thesis as a model to study the ecological consequences deriving by two key mechanisms: interspecific trophic interactions and introgressive hybridisation. B. barbus is a large bodied cyprinid native to central Europe that has been introduced outside its native range in western England and Italy. The consequences of interspecific competition with functionally analogous fishes were tested in a serious of experimental conditions at different scales (from tank aquaria to mesocosms) with impacts measured on trophic niches and fish growth rates. Trophic ecology of B. barbus was also investigated in 11 wild populations of the UK also in relation to the use of angler’s baits (pelletized meal) that can act as trophic subsidies and facilitate B. barbus integration into the invaded communities. Introgressive hybridization consequences on functional traits (i.e. trophic ecology, morphology and life traits) was instead tested in wild Italian populations where B. barbus readily hybridize with native co-generic analogous B. plebejus and B. tyberinus. Finally, a further aspect that was considered in this study was the cryptic diversity of Barbus fluvio-lacustrine species in Italy that can lead to an underestimation of the extinction risk faced by barbels also in relation to B. barbus invasion. The experimental approaches demonstrated that competitive interaction among B. barbus and other analogous cyprinids (i.e. Leuciscus idus and Squalius cephalus) can result in suppressed growth rate but trophic niche segregation and constriction (i.e. diet diversification and specialisation) allow fish to co-occur and avoid outcompetition. Compared to intra-specific competition, the effects on fish growth rate were similar (i.e. reduced in both cases), but contrastingly, intraspecific competition produces an increase in niche size (i.e. generalization of diets). This provided experimental evidence for the niche variation hypothesis and explains the strong niche partitioning observed in previous studies on invasive B. barbus populations in English rivers. Moreover, although B. barbus appeared as a weaker competitor than the invasive L. idus, its introduction can result in isotopic niche reorganizations that can scale out to other community members with this requiring further elucidations. In agreement with previous studies, we found that some adult individuals in 11 UK wild B. barbus populations specialized their diets on allochthonous anglers’ baits as shown by their carbon isotope ratio (δ13C) strongly differentiated from that of freshwater macroinvertebrates. However, this varied considerably over space also according to angling pressure and it is unlikely that it helped to ease the interspecific competition of the barbel with native species that is instead more likely to be driven by niche variation processes. Introgressive hybridization with Italian native barbel populations resulted in hybrid populations, with mitochondrial DNA skewed toward B. barbus genotype and only 23% to 4% purebred native genotypes remaining in nuclear DNA. Significant alterations in morphology, enhanced growth rate, different diet and trophic position were detected in one hybrid population highlighting as introgressive hybridization is not only eroding the genetic integrity of native barbel species, but it has the potential to alter the functional role of barbel with consequent impacts that may influence also non-barbel members of the receiving community. Conversely, the detection of hybrid vigour underlined the adaptive role of introgression with hybrids that may be able to persist in areas where native barbel are disfavoured thus raising contrasting conservation perspectives. Purebred native species are likely to be confined to locations where barriers prevent B. barbus expansion and therefore there is a need to reconcile conservation needs to restore fluvial connectivity with the important role of isolated river stretches in offering refuge to native species. Geometric morphometrics and molecular analyses revealed the presence of two previously undetected barbel lineages in southern Italian basins for which a new description (B. samniticus sp. nov.) and a re-establishment (B. fucini Costa 1853) are proposed. Evolutionary history of these lineages may reveal some new insights into the evolution of the southern Italian basins and are therefore of great conservation interest. However, like B. plebejus and B. tyberinus species, the southern Italian lineages are already threatened especially by fish translocations and B. barbus and other exotic species invasions and they urgently require adequate protection. In conclusion, this thesis enhanced our understanding of the complex mechanisms governing the ecological and evolutionary consequences associated with biological invasions and brought new insights into Barbus genus diversity in Italy with important conservation implication