High resolution spatial variability in spring snowmelt for an Arctic shrub-tundra watershed

Arctic tundra environments are characterized by spatially heterogeneous end-of-winter snow cover because of high winds that erode, transport and deposit snow over the winter. This spatially variable end-of-winter snow cover subsequently influences the spatial and temporal variability of snowmelt and results in a patchy snowcover over the melt period. Documenting changes in both snow cover area (SCA) and snow water equivalent (SWE) during the spring melt is essential for understanding hydrological systems, but the lack of high-resolution SCA and SWE datasets that accurately capture micro-scale changes are not commonly available, and do not exist for the Canadian Arctic. This study applies high-resolution remote sensing measurements of SCA and SWE using a fixed-wing Unmanned Aerial System (UAS) to document snowcover changes over the snowmelt period for an Arctic tundra headwater catchment. Repeat measurements of SWE and SCA were obtained for four dominant land cover types (tundra, short shrub, tall shrub, and topographic drift) to provide observations of spatially distributed snowmelt patterns and basin-wide declines in SWE. High-resolution analysis of snowcover conditions over the melt reveal a strong relationship between land cover type, snow distribution, and snow ablation rates whereby shallow snowpacks found in tundra and short shrub regions feature rapid declines in SWE and SCA and became snow-free approximately 10 days earlier than deeper snowpacks. In contrast, tall shrub patches and topographic drift regions were characterized by large initial SWE values and featured a slow decline in SCA. Analysis of basin-wide declines in SCA and SWE reveal three distinct melt phases characterized by 1) low melt rates across a large area resulting in a minor change in SCA, but a very large decline in SWE with, 2) high melt rates resulting in drastic declines in both SCA and SWE, and 3) low melt rates over a small portion of the basin, resulting in little change to either SCA or SWE. The ability to capture high-resolution spatio-temporal changes to tundra snow cover furthers our understanding of the relative importance of various land cover types on the snowmelt timing and amount of runoff available to the hydrological system during the spring freshet

SNP discovery and linkage mapping in Nicotiana

Abstract only availableWe are developing a genetic linkage map in F2 populations descended from a cross between Nicotiana plumbaginafolia and N. longiflora as well as the reciprocal cross. We are using an interspecific cross because is an outbreeder and is a self-pollinator. Combining our linkage map with estimates of self-fertilization in the F2 will allow us to make a Quantitative Trait Locus (QTL) map that may allow us to identify chromosome segments that are associated with self-pollination. We are concentrating on discovering new genetic markers. We are seeking SNPs (Single Nucleotide Polymorphisms) because they are co-dominant markers, i.e., both kinds of homozygotes and the heterozygote can be identified (e.g., AA, Aa, aa). In contrast, dominant markers can only identify the recessive homozygote unambiguously (aa); the dominant homozygote and the heterozygote are indistinguishable (AA = Aa). Therefore, co-dominant genetic markers are much more informative than dominant markers. We are seeking to identify genetic polymorphisms from known COS (Conserved Ortholog Set) loci because COS markers have been used to map many other species. Therefore, our linkage map will allow us to compare the chromosomal locations of these loci in our cross, versus other COS-mapped plants.In order to determine SNPs in the genome of Nicotiana, there are two possible approaches. We can sequence both parents of the F2 population and look for the differences between the two species as well as sequence the heterozygotes and look for differences within the F2. Thus far, we have tried 3 COS loci and found 1 polymorphism. We are using the CAPS procedure to assay the polymorphisms. We use restriction enzymes to cut at specific locations within the primer region and determine if each individual is homozygous dominant, homozygous recessive, or heterozygous.Life Sciences Undergraduate Research Opportunity Progra

Simulation of nitrate, sulfate, and ammonium aerosols over the United States

Atmospheric concentrations of inorganic gases and aerosols (nitrate, sulfate, and ammonium) are simulated for 2009 over the United States using the chemical transport model GEOS-Chem. Predicted aerosol concentrations are compared with surface-level measurement data from the Interagency Monitoring of Protected Visual Environments (IMPROVE), the Clean Air Status and Trends Network (CASTNET), and the California Air Resources Board (CARB). Sulfate predictions nationwide are in reasonably good agreement with observations, while nitrate and ammonium are over-predicted in the East and Midwest, but under-predicted in California, where observed concentrations are the highest in the country. Over-prediction of nitrate in the East and Midwest is consistent with results of recent studies, which suggest that nighttime nitric acid formation by heterogeneous hydrolysis of N<sub>2</sub>O<sub>5</sub> is over-predicted based on current values of the N<sub>2</sub>O<sub>5</sub> uptake coefficient, γ, onto aerosols. After reducing the value of γ by a factor of 10, predicted nitrate levels in the US Midwest and East still remain higher than those measured, and over-prediction of nitrate in this region remains unexplained. Comparison of model predictions with satellite measurements of ammonia from the Tropospheric Emissions Spectrometer (TES) indicates that ammonia emissions in GEOS-Chem are underestimated in California and that the nationwide seasonality applied to ammonia emissions in GEOS-Chem does not represent California very well, particularly underestimating winter emissions. An ammonia sensitivity study indicates that GEOS-Chem simulation of nitrate is ammonia-limited in southern California and much of the state, suggesting that an underestimate of ammonia emissions is likely the main cause for the under-prediction of nitrate aerosol in many areas of California. An approximate doubling of ammonia emissions is needed to reproduce observed nitrate concentrations in southern California and in other ammonia sensitive areas of California. However, even a tenfold increase in ammonia emissions yields predicted nitrate concentrations that are still biased low in the central valley of California. The under-prediction of nitrate aerosol in the central valley of California may arise in part from an under-prediction of both ammonia and nitric acid in this region. Since nitrate aerosols are particularly sensitive to mixed layer depths, owing to the gas-particle equilibrium, the nitrate under-prediction could also arise in part from a potential regional overestimate of GEOS-5 mixed layer depths in the central valley due to unresolved topography in this region

Return to Sport and Athletic Function in an Active Population After Primary Arthroscopic Labral Reconstruction of the Hip

Background: Labral reconstruction has been advocated as an alternative to debridement for the treatment of irreparable labral tears, showing favorable short-term results. However, literature is scarce regarding outcomes and return to sport in the nonelite athletic population. Purpose: To report minimum 1-year clinical outcomes and the rate of return to sport in athletic patients who underwent primary hip arthroscopy with labral reconstruction in the setting of femoroacetabular impingement syndrome and irreparable labral tears. Study Design: Case series; Level of evidence, 4. Methods: Data were prospectively collected and retrospectively analyzed for patients who underwent an arthroscopic labral reconstruction between August 2012 and December 2017. Patients were included if they identified as an athlete (high school, college, recreational, or amateur); had follow-up on the following patient-reported outcomes (PROs): modified Harris Hip Score (mHHS), Nonarthritic Hip Score (NAHS), Hip Outcome Score–Sport Specific Subscale (HOS-SSS), and visual analog scale (VAS); and completed a return-to-sport survey at 1 year postoperatively. Patients were excluded if they underwent any previous ipsilateral hip surgery, had dysplasia, or had prior hip conditions. The proportions of patients who achieved the minimal clinically important difference (MCID) and patient acceptable symptomatic state (PASS) for mHHS and HOS-SSS were calculated. Statistical significance was set at P =.05. Results: There were 32 (14 females) athletes who underwent primary arthroscopic labral reconstruction during the study period. The mean age and body mass index of the group were 40.3 years (range, 15.5-58.7 years) and 27.9 kg/m2 (range, 19.6-40.1 kg/m2), respectively. The mean follow-up was 26.4 months (range, 12-64.2 months). All patients demonstrated significant improvement in mHHS, NAHS, HOS-SSS, and VAS (P \u3c.001) at latest follow-up. Additionally, 84.4% achieved MCID and 81.3% achieved PASS for mHHS, and 87.5% achieved MCID and 75% achieved PASS for HOS-SSS. VAS pain scores decreased from 4.4 to 1.8, and the satisfaction with surgery was 7.9 out of 10. The rate of return to sport was 78%. Conclusion: At minimum 1-year follow-up, primary arthroscopic labral reconstruction, in the setting of femoroacetabular impingement syndrome and irreparable labral tears, was associated with significant improvement in PROs in athletic populations. Return to sport within 1 year of surgery was 78%

Wind field and sex constrain the flight speeds of central-place foraging albatrosses

By extracting energy from the highly dynamic wind and wave fields that typify pelagic habitats, albatrosses are able to proceed almost exclusively by gliding flight. Although energetic costs of gliding are low, enabling breeding albatrosses to forage hundreds to thousands of kilometers from their colonies, these and time costs vary with relative wind direction. This causes albatrosses in some areas to route provisioning trips to avoid headwind flight, potentially limiting habitat accessibility during the breeding season. In addition, because female albatrosses have lower wing loadings than males, it has been argued that they are better adapted to flight in light winds, leading to sexual segregation of foraging areas. We used satellite telemetry and immersion logger data to quantify the effects of relative wind speed, sex, breeding stage, and trip stage on the ground speeds (Vg) of four species of Southern Ocean albatrosses breeding at South Georgia. Vg was linearly related to the wind speed component in the direction of flight (Vwf), its effect being greatest on Wandering Albatrosses Diomedea exulans, followed by Black-browed Albatrosses Thalassarche melanophrys, Light-mantled Sooty Albatrosses Phoebatria palpebrata, and Gray-headed Albatrosses T. chrysostoma. Ground speeds at Vwf = 0 were similar to airspeeds predicted by aerodynamic theory and were higher in males than in females. However, we found no evidence that this led to sexual segregation, as males and females experienced comparable wind speeds during foraging trips. Black-browed, Gray-headed, and Light-mantled Sooty Albatrosses did not engage in direct, uninterrupted bouts of flight on moonless nights, but Wandering Albatrosses attained comparable Vg night and day, regardless of lunar phase. Relative flight direction was more important in determining Vg than absolute wind speed. When birds were less constrained in the middle stage of foraging trips, all species flew predominantly across the wind. However, in some instances, commuting birds encountered headwinds during outward trips and tail winds on their return, with the result that Vg was 1.0–3.4 m/s faster during return trips. This, we hypothesize, could result from constraints imposed by the location of prey resources relative to the colony at South Georgia or could represent an energy optimization strategy

Plasma ATP concentration and venous oxygen content in the forearm during dynamic handgrip exercise

Background It has been proposed that adenosine triphosphate (ATP) released from red blood cells (RBCs) may contribute to the tight coupling between blood flow and oxygen demand in contracting skeletal muscle. To determine whether ATP may contribute to the vasodilatory response to exercise in the forearm, we measured arterialised and venous plasma ATP concentration and venous oxygen content in 10 healthy young males at rest, and at 30 and 180 seconds during dynamic handgrip exercise at 45% of maximum voluntary contraction (MVC). Results Venous plasma ATP concentration was elevated above rest after 30 seconds of exercise (P < 0.05), and remained at this higher level 180 seconds into exercise (P < 0.05 versus rest). The increase in ATP was mirrored by a decrease in venous oxygen content. While there was no significant relationship between ATP concentration and venous oxygen content at 30 seconds of exercise, they were moderately and inversely correlated at 180 seconds of exercise (r = -0.651, P = 0.021). Arterial ATP concentration remained unchanged throughout exercise, resulting in an increase in the venous-arterial ATP difference. Conclusions Collectively these results indicate that ATP in the plasma originated from the muscle microcirculation, and are consistent with the notion that deoxygenation of the blood perfusing the muscle acts as a stimulus for ATP release. That ATP concentration was elevated just 30 seconds after the onset of exercise also suggests that ATP may be a contributing factor to the blood flow response in the transition from rest to steady state exercise

Optimised processing of faba bean (<i>Vicia faba L.</i>) kernels as a brewing adjunct

Pulse (Fabaceae) grains, such as peas and beans, are derived from crops that are usually cultivated in the absence of mineral nitrogen fertiliser as these crops can obtain their nitrogen requirement naturally from the air via biological nitrogen fixation. Therefore, pulses present a significantly lower greenhouse gas (GHG) footprint than crops demanding nitrogen fertiliser, whilst also offering significant quantities of starch for the brewing and distilling industries. Mitigation of agriculture derived GHG emissions through utilisation of pulses can have a positive environmental impact. To this end, the potential of exploiting dry, dehulled faba bean (Vicia faba L.) kernel flour as an adjunct for beer production was evaluated. The impact of different temperature regimes and commercial enzymes were assessed for their effect on wort: viscosity; run-off rate; primary amino nitrogen content and, fermentability. Faba beans demonstrated insufficient endogenous enzyme capacity for starch conversion and generated a viscous wort. However, using a stepped temperature mashing regime and exogenous enzyme additions, the faba bean wort was comparable in processability and fermentability to that of 100% malted barley wort. The faba based beer and co-product qualities demonstrate the environmental, nutritional and commercial potential of pulses in brewing.</p

Amphetamine increases blood pressure and heart rate but has no effect on motor recovery or cerebral haemodynamics in ischaemic stroke: a randomized controlled trial (ISRCTN 36285333)

Amphetamine enhances recovery after experimental ischaemia and has shown promise in small clinical trials when combined with motor or sensory stimulation. Amphetamine, a sympathomimetic, might have haemodynamic effects in stroke patients, although limited data have been published. Subjects were recruited 3-30 days post ischaemic stroke into a phase II randomised (1:1), double blind, placebo-controlled trial. Subjects received dexamphetamine (5mg initially, then 10mg for 10 subsequent doses with 3 or 4 day separations) or placebo in addition to inpatient physiotherapy. Recovery was assessed by motor scales (Fugl-Meyer, FM), and functional scales (Barthel index, BI and modified Rankin score, mRS). Peripheral blood pressure (BP), central haemodynamics and middle cerebral artery blood flow velocity were assessed before, and 90 minutes after, the first 2 doses. 33 subjects were recruited, age 33-88 (mean 71) years, males 52%, 4-30 (median 15) days post stroke to inclusion. 16 patients were randomised to placebo and 17 amphetamine. Amphetamine did not improve motor function at 90 days; mean (standard deviation) FM 37.6 (27.6) vs. control 35.2 (27.8) (p=0.81). Functional outcome (BI, mRS) did not differ between treatment groups. Peripheral and central systolic BP, and heart rate, were 11.2 mmHg (p=0.03), 9.5 mmHg (p=0.04) and 7 beats/minute (p=0.02) higher respectively with amphetamine, compared with control. A non-significant reduction in myocardial perfusion (Buckberg Index) was seen with amphetamine. Other cardiac and cerebral haemodynamics were unaffected. Amphetamine did not improve motor impairment or function after ischaemic stroke but did significantly increase BP and heart rate without altering cerebral haemodynamics

Utilization of low nitrogen barley for production of distilling quality malt

The potential to utilize low nitrogen barley for production of distilling quality malt was studied. This presents an opportunity to reduce the environmental impact of nitrogen fertilizer applications. Malting barley (cv. Octavia) was grown without the application of inorganic nitrogen fertilizer, to produce grain with a relatively low nitrogen concentration (1.16%, dry weight basis). Following micro-malting trials, dextrinizing units (58 DU) obtained from low nitrogen malt were much higher than a typical specification of 45 DU for malt with a conventional nitrogen concentration (&lt;1.5%). A higher soluble nitrogen ratio (SNR) or index of modification (IoM) of 49 indicated greater modification of the low nitrogen barley, resulting in higher extract released into the wort. Additionally, much lower levels of β-glucan were found in low nitrogen malt wort (64 mg/L compared with over 100 mg/L in wort of conventional nitrogen malt). Low nitrogen malt also produced higher predicted spirit yields following wort fermentation and wash distillation. These findings indicate that lower nitrogen concentration barley can be processed without negatively impacting malt quality for distilling applications. The implication of these findings to help realize more environmentally sustainable production of barley for malting and use in distilling is discussed.</p