Post-processing to remove residual clouds from aerosol optical depth retrieved using the Advanced Along Track Scanning Radiometer

Cloud misclassification is a serious problem in the retrieval of aerosol optical depth (AOD), which might considerably bias the AOD results. On the one hand, residual cloud contamination leads to AOD overestimation, whereas the removal of high-AOD pixels (due to their misclassification as clouds) leads to underestimation. To remove cloudcontaminated areas in AOD retrieved from reflectances measured with the (Advanced) Along Track Scanning Radiometers (ATSR-2 and AATSR), using the ATSR dual-view algorithm (ADV) over land or the ATSR single-view algorithm (ASV) over ocean, a cloud post-processing (CPP) scheme has been developed at the Finnish Meteorological Institute (FMI) as described in Kolmonen et al. (2016). The application of this scheme results in the removal of cloudcontaminated areas, providing spatially smoother AOD maps and favourable comparison with AOD obtained from the ground-based reference measurements from the AERONET sun photometer network. However, closer inspection shows that the CPP also removes areas with elevated AOD not due to cloud contamination, as shown in this paper. We present an improved CPP scheme which better discriminates between cloud-free and cloud-contaminated areas. The CPP thresholds have been further evaluated and adjusted according to the findings. The thresholds for the detection of high-AOD regions (> 60% of the retrieved pixels should be high-AOD (> 0.6) pixels), and cloud contamination criteria for lowAOD regions have been accepted as the default for AOD global post-processing in the improved CPP. Retaining elevated AOD while effectively removing cloud-contaminated pixels affects the resulting global and regional mean AOD values as well as coverage. Effects of the CPP scheme on both spatial and temporal variation for the period 2002-2012 are discussed. With the improved CPP, the AOD coverage increases by 10-15% with respect to the existing scheme. The validation versus AERONET shows an improvement of the correlation coefficient from 0.84 to 0.86 for the global data set for the period 2002-2012. The global aggregated AOD over land for the period 2003-2011 is 0.163 with the improved CPP compared to 0.144 with the existing scheme. The aggregated AOD over ocean and globally (land and ocean together) is 0.164 with the improved CPP scheme (compared to 0.152 and 0.150 with the existing scheme, for ocean and globally respectively). Effects of the improved CPP scheme on the 10-year time series are illustrated and seasonal and temporal changes are discussed. The improved CPP method introduced here is applicable to other aerosol retrieval algorithms. However, the thresholds for detecting the high-AOD regions, which were developed for AATSR, might have to be adjusted to the actual features of the instruments.Peer reviewe

An artificial intelligence approach to remotely assess pale lichen biomass

Although generally given little attention in vegetation studies, ground-dwelling (terricolous) lichens are major contributors to overall carbon and nitrogen cycling, albedo, biodiversity and biomass in many high-latitude ecosystems. Changes in biomass of mat-forming pale lichens have the potential to affect vegetation, fauna, climate and human activities including reindeer husbandry. Lichens have a complex spectral signature and terricolous lichens have limited growth height, often growing in mixtures with taller vegetation. This has, so far, prevented the development of remote sensing techniques to accurately assess lichen biomass, which would be a powerful tool in ecosystem and ecological research and rangeland management. We present a Landsat based remote sensing model developed using deep neural networks, trained with 8914 field records of lichen volume collected for > 20 years. In contrast to earlier proposed machine learning and regression methods for lichens, our model exploited the ability of neural networks to handle mixed spatial resolution input. We trained candidate models using input of 1 x 1 (30 x 30 m) and 3 x 3 Landsat pixels based on 7 reflective bands and 3 indices, combined with a 10 m spatial resolution digital elevation model. We normalised elevation data locally for each plot to remove the region-specific variation, while maintaining informative local variation in topography. The final model predicted lichen volume in an evaluation set (n = 159) reaching an R2 of 0.57. NDVI and elevation were the most important predictors, followed by the green band. Even with moderate tree cover density, the model was efficient, offering a considerable improvement compared to earlier methods based on specific reflectance. The model was in principle trained on data from Scandinavia, but when applied to sites in North America and Russia, the predictions of the model corresponded well with our visual interpretations of lichen abundance. We also accurately quantified a recent historic (35 years) change in lichen abundance in northern Norway. This new method enables further spatial and temporal studies of variation and changes in lichen biomass related to multiple research questions as well as rangeland management and economic and cultural ecosystem services. Combined with information on changes in drivers such as climate, land use and management, and air pollution, our model can be used to provide accurate estimates of ecosystem changes and to improve vegetation-climate models by including pale lichens.Peer reviewe

Evaluation of seven European aerosol optical depth retrieval algorithms for climate analysis

Satellite data are increasingly used to provide observation-based estimates of the effects of aerosols on climate. The Aerosol-cci project, part of the European Space Agency's Climate Change Initiative (CCI), was designed to provide essential climate variables for aerosols from satellite data. Eight algorithms, developed for the retrieval of aerosol properties using data from AATSR (4), MERIS (3) and POLDER, were evaluated to determine their suitability for climate studies. The primary result from each of these algorithms is the aerosol optical depth (AOD) at several wavelengths, together with the Ångström exponent (AE) which describes the spectral variation of the AOD for a given wavelength pair. Other aerosol parameters which are possibly retrieved from satellite observations are not considered in this paper. The AOD and AE (AE only for Level 2) were evaluated against independent collocated observations from the ground-based AERONET sun photometer network and against “reference” satellite data provided by MODIS and MISR. Tools used for the evaluation were developed for daily products as produced by the retrieval with a spatial resolution of 10 × 10 km2 (Level 2) and daily or monthly aggregates (Level 3). These tools include statistics for L2 and L3 products compared with AERONET, as well as scoring based on spatial and temporal correlations. In this paper we describe their use in a round robin (RR) evaluation of four months of data, one month for each season in 2008. The amount of data was restricted to only four months because of the large effort made to improve the algorithms, and to evaluate the improvement and current status, before larger data sets will be processed. Evaluation criteria are discussed. Results presented show the current status of the European aerosol algorithms in comparison to both AERONET and MODIS and MISR data. The comparison leads to a preliminary conclusion that the scores are similar, including those for the references, but the coverage of AATSR needs to be enhanced and further improvements are possible for most algorithms. None of the algorithms, including the references, outperforms all others everywhere. AATSR data can be used for the retrieval of AOD and AE over land and ocean. PARASOL and one of the MERIS algorithms have been evaluated over ocean only and both algorithms provide good results

New national and regional biological records for Finland 11. Contributions to Bryophyta and Marchantiophyta 10

Ten species of mosses (Bryophyta: Entosthodon obtusus, Entosthodon ulvinenii, Eurhynchiastrum diversifolium, Hedwigia emodica, Hedwigia mollis, Hygrohypnum styriacum, Plagiothecium rossicum, Polytrichum perigoniale, Tortella alpicola and Ulota intermedia) are presented as new for Finland. Cephalozia lacinulata, previously considered to be regionally extinct from Finland, is reported to being found again. New records in biogeographical provinces for 67 species of mosses and 34 species of liverworts are listed. Finally, 6 occurrences in provinces are removed due to misidentifications or missing specimens

Multi-sectoral Impact Assessment of an Extreme African Dust Episode in the Eastern Mediterranean in March 2018

In late March 2018, a large part of the Eastern Mediterranean experienced an extraordinary episode of African dust, one of the most intense in recent years, here referred to as the “Minoan Red” event. The episode mainly affected the Greek island of Crete, where the highest aerosol concentrations over the past 15 yeas were recorded, although impacts were also felt well beyond this core area. Our study fills a gap in dust research by assessing the multi-sectoral impacts of sand and dust storms and their socioeconomic implications. Specifically, we provide a multi-sectoral impact assessment of Crete during the occurrence of this exceptional African dust event. During the day of the occurrence of the maximum dust concentration in Crete, i.e. March 22nd, 2018, we identified impacts on meteorological conditions, agriculture, transport, energy, society (including closing of schools and cancellation of social events), and emergency response systems. As a result, the event led to a 3-fold increase in daily emergency responses compare to previous days associated with urban emergencies and wildfires, a 3.5-fold increase in hospital visits and admissions for Chronic Obstructive Pulmonary Disease (COPD) exacerbations and dyspnoea, a reduction of visibility causing aircraft traffic disruptions (eleven cancellations and seven delays), and a reduction of solar energy production. We estimate the cost of direct and indirect effects of the dust episode, considering the most affected socio-economic sectors (e.g. civil protection, aviation, health and solar energy production), to be between 3.4 and 3.8 million EUR for Crete. Since such desert dust transport episodes are natural, meteorology-driven and thus to a large extent unavoidable, we argue that the efficiency of actions to mitigate dust impacts depends on the accuracy of operational dust forecasting and the implementation of relevant early warning systems for social awareness

Multi-sectoral impact assessment of an extreme African dust episode in the Eastern Mediterranean in March 2018

In late March 2018, a large part of the Eastern Mediterranean experienced an extraordinary episode of African dust, one of the most intense in recent years, here referred to as the “Minoan Red” event. The episode mainly affected the Greek island of Crete, where the highest aerosol concentrations over the past 15 yeas were recorded, although impacts were also felt well beyond this core area. Our study fills a gap in dust research by assessing the multi-sectoral impacts of sand and dust storms and their socioeconomic implications. Specifically, we provide a multi-sectoral impact assessment of Crete during the occurrence of this exceptional African dust event. During the day of the occurrence of the maximum dust concentration in Crete, i.e. March 22nd, 2018, we identified impacts on meteorological conditions, agriculture, transport, energy, society (including closing of schools and cancellation of social events), and emergency response systems. As a result, the event led to a 3-fold increase in daily emergency responses compare to previous days associated with urban emergencies and wildfires, a 3.5-fold increase in hospital visits and admissions for Chronic Obstructive Pulmonary Disease (COPD) exacerbations and dyspnoea, a reduction of visibility causing aircraft traffic disruptions (eleven cancellations and seven delays), and a reduction of solar energy production. We estimate the cost of direct and indirect effects of the dust episode, considering the most affected socio-economic sectors (e.g. civil protection, aviation, health and solar energy production), to be between 3.4 and 3.8 million EUR for Crete. Since such desert dust transport episodes are natural, meteorology-driven and thus to a large extent unavoidable, we argue that the efficiency of actions to mitigate dust impacts depends on the accuracy of operational dust forecasting and the implementation of relevant early warning systems for social awareness.Thanks are due to FCT/MCTES for the financial support to CESAM (UIDP/50017/2020+UIDB/50017/2020) through national funds, and also to the Icelandic Research Fund for the grant no. 207057-051. Authors S. Kazadzis and P. Kosmopoulos would like to acknowledge the European Commission project EuroGEO e-shape (grant agreement No 820852). Also, International Cooperative for Aerosol Prediction (ICAP) and NASA mission researchers are gratefully for providing aerosol data for this study. Aurelio Tobias was supported by MCIN/AEI/10.13039/501100011033 (grant CEX2018-000794-S). S. Kutuzov acknowledges the Megagrant project (agreement No. 075-15-2021-599, 8.06.2021)

Salivary MMP-13 Gender Differences in Periodontitis: A Cross-sectional Study from Sweden

We investigated serum and saliva concentrations of matrix metalloproteinases, MMP-8, MMP-9 and MMP-13, and their tissue inhibitor TIMP-1, in a group of patients with and without periodontitis from Sweden. The hypothesis was that these biomarkers are higher in the periodontitis patients. 90 patients participated in this cross-sectional study. 51 patients had periodontitis while 39 were periodontally healthy. Saliva and serum samples were analyzed with immunofluorometric, enzyme-linked immunosorbent assay and western blot. Results were statistically analyzed with independent t-test, Mann-Whitney U-test, Bonferroni corrections and regression analyses. MMP-13 was not detected in serum but in saliva higher values were found among the periodontally healthy compared with periodontitis subjects (0.32±0.26 vs. 0.21±0.23 ng/ml, p<0.05). Female gender and clinical attachment loss (CAL) were the explanatory factors for higher salivary MMP-13 values with odds ratio (OR) 3.08 (95% confidence interval [CI] 1.17-8.11) and 3.57 (1.08-11.82), respectively. No statistically significant differences between groups was found in serum and saliva values of MMP-8, MMP-9 and TIMP-1, respectively. Contrary to our hypothesis, no statistically significant differences between patients with and without periodontitis was seen in MMP-8, MMP-9, and TIMP-1 values. However higher MMP-13 concentrations in saliva were associated with female gender and higher CAL. Metabolism of MMP-13 may thus have some gender implications in periodontitis.Peer reviewe