Review of bio-particle manipulation using dielectrophoresis

During the last decade, large and costly instruments are being replaced by system based on microfluidic devices. Microfluidic devices hold the promise of combining a small analytical laboratory onto a chip-sized substrate to identify, immobilize, separate, and purify cells, bio-molecules, toxins, and other chemical and biological materials. Compared to conventional instruments, microfluidic devices would perform these tasks faster with higher sensitivity and efficiency, and greater affordability. Dielectrophoresis is one of the enabling technologies for these devices. It exploits the differences in particle dielectric properties to allow manipulation and characterization of particles suspended in a fluidic medium. Particles can be trapped or moved between regions of high or low electric fields due to the polarization effects in non-uniform electric fields. By varying the applied electric field frequency, the magnitude and direction of the dielectrophoretic force on the particle can be controlled. Dielectrophoresis has been successfully demonstrated in the separation, transportation, trapping, and sorting of various biological particles.Singapore-MIT Alliance (SMA

healthcareCOVID: a national cross-sectional observational study identifying risk factors for developing suspected or confirmed COVID-19 in UK healthcare workers.

To establish the prevalence, risk factors and implications of suspected or confirmed coronavirus disease 2019 (COVID-19) infection among healthcare workers in the United Kingdom (UK). Cross-sectional observational study. UK-based primary and secondary care. Healthcare workers aged ≥18 years working between 1 February and 25 May 2020. A composite endpoint of laboratory-confirmed diagnosis of SARS-CoV-2, or self-isolation or hospitalisation due to suspected or confirmed COVID-19. Of 6,152 eligible responses, the composite endpoint was present in 1,806 (29.4%) healthcare workers, of whom 49 (0.8%) were hospitalised, 459 (7.5%) tested positive for SARS-CoV-2, and 1,776 (28.9%) reported self-isolation. Overall, between 11,870 and 21,158 days of self-isolation were required by the cohort, equalling approximately 71 to 127 working days lost per 1,000 working days. The strongest risk factor associated with the presence of the primary composite endpoint was increasing frequency of contact with suspected or confirmed COVID-19 cases without adequate personal protective equipment (PPE): 'Never' (reference), 'Rarely' (adjusted odds ratio 1.06, (95% confidence interval: [0.87-1.29])), 'Sometimes' (1.7 [1.37-2.10]), 'Often' (1.84 [1.28-2.63]), 'Always' (2.93, [1.75-5.06]). Additionally, several comorbidities (cancer, respiratory disease, and obesity); working in a 'doctors' role; using public transportation for work; regular contact with suspected or confirmed COVID-19 patients; and lack of PPE were also associated with the presence of the primary endpoint. A total of 1,382 (22.5%) healthcare workers reported lacking access to PPE items while having clinical contact with suspected or confirmed COVID-19 cases. Suspected or confirmed COVID-19 was more common in healthcare workers than in the general population and is associated with significant workforce implications. Risk factors included inadequate PPE, which was reported by nearly a quarter of healthcare workers. Governments and policymakers must ensure adequate PPE is available as well as developing strategies to mitigate risk for high-risk healthcare workers during future COVID-19 waves. [Abstract copyright: © 2021 Kua et al.

Look ahead to improve QoE in DASH streaming

[EN] When a video is encoded with constant quality, the resulting bitstream will have variable bitrate due to the inherent nature of the video encoding process. This paper proposes a video Adaptive Bitrate Streaming (ABR) algorithm, called Look Ahead, which takes into account this bitrate variability in order to calculate, in real time, the appropriate quality level that minimizes the number of interruptions during the playback. The algorithm is based on the Dynamic Adaptive Streaming over HTTP (DASH) standard for on-demand video services. In fact, it has been implemented and integrated into ExoPlayer v2, the latest version of the library developed by Google to play DASH contents. The proposed algorithm is compared to the Müller and Segment Aware Rate Adaptation (SARA) algorithms as well as to the default ABR algorithm integrated into ExoPlayer. The comparison is carried out by using the most relevant parameters that affect the Quality of Experience (QoE) in video playback services, that is, number and duration of stalls, average quality of the video playback and number of representation switches. These parameters can be combined to define a QoE model. In this sense, this paper also proposes two new QoE models for the evaluation of ABR algorithms. One of them considers the bitrate of every segment of each representation, and the second is based on VMAF (Video Multimethod Assessment Fusion), a Video Quality Assessment (VQA) method developed by Netflix. The evaluations presented in the paper reflect: first, that Look Ahead outperforms the Müller, SARA and the ExoPlayer ABR algorithms in terms of number and duration of video playback stalls, with hardly decreasing the average video quality; and second, that the two QoE models proposed are more accurate than other similar models existing in the literature.This work is supported by the PAID-10-18 Program of the Universitat Politecnica de Valencia (Ayudas para contratos de acceso al sistema espanol de Ciencia, Tecnologia e Innovacion, en estructuras de investigacion de la Universitat Politecnica de Valencia) and by the Project 20180810 from the Universitat Politecnica de Valencia ("Tecnologias de distribucion y procesado de informacion multimedia y QoE").Belda Ortega, R.; De Fez Lava, I.; Arce Vila, P.; Guerri Cebollada, JC. (2020). Look ahead to improve QoE in DASH streaming. Multimedia Tools and Applications. 79(33-34):25143-25170. https://doi.org/10.1007/s11042-020-09214-9S25143251707933-34Akhshabi S, Narayanaswamy S, Begen AC, Dovrolis C (2012) An experimental evaluation of rate-adaptive video players over HTTP. Signal process. Image Commun 27(4):271–287. https://doi.org/10.1016/j.image.2011.10.003Android Developers webpage, ExoPlayer. Available online at: https://developer.android.com/guide/topics/media/exoplayer.html . Accessed: Jun. (2019)Bampis CG, Li Z, Bovik AC (2018) SpatioTemporal feature integration and model fusion for full reference video quality assessment. IEEE Trans on Circuits and Syst for Video Tech 29:2256–2270. https://doi.org/10.1109/TCSVT.2018.2868262Barman N, Martini MG (2019) QoE modeling for HTTP adaptive video streaming - a survey and open challenges. IEEE Access 7:30831–30859. https://doi.org/10.1109/ACCESS.2019.2901778Belda R (2013) Algoritmo de adaptación DASH: Look Ahead. Master Thesis. Universitat Politècnica de València. http://hdl.handle.net/10251/33359 .Belda R, de Fez I, Arce P, Guerri J C (2018) Look ahead: a DASH adaptation algorithm. Proc. of the IEEE Int. Symp. On broadband multimed. Syst. And broadcast., Valencia, Spain: article no. 158. https://doi.org/10.1109/BMSB.2018.8436718 .Blender Foundation webpage. Available online at: https://www.blender.org/foundation . Accessed: Jun. (2019).Cortes C, Vapnik V (1995) Support-vector networks. Mach Learn 20-3:273–297. https://doi.org/10.1023/A:1022627411411DASH Industry forum webpage. Available online at: http://dashif.org . Accessed: Jun. (2019)Ghadiyaram D, Pan J, Bovik AC (2019) A subjective and objective study of stalling events in mobile streaming videos. IEEE Trans on Circuits and Syst for Video Technol 29(1):183–197. https://doi.org/10.1109/TCSVT.2017.2768542Ghent University. 4G/LTE bandwidth logs. Available online at: http://users.ugent.be/~jvdrhoof/dataset-4g . Accessed: Jun. (2019).Github webpage. A DASH segment size aware rate adaptation model for DASH. Available online at: https://github.com/pari685/AStream . Accessed: Jun. (2019)GitHub website. Dashgen, Multimedia Communications Group. Available online at: https://github.com/comm-iteam/dashgen . Accessed: Jun. (2019).van der Hooft J, Petrangeli S, Wauters T, Huysegems R, Alface PR, Bostoen T, De Turck F (2016) HTTP/2-based adaptive streaming of HEVC video over 4G/LTE networks. IEEE Commun Lett 20(1):2177–2180. https://doi.org/10.1109/LCOMM.2016.2601087Huang TY, Johari R, McKeown N, Trunnell M, Watson M (2014) A buffer-based approach to rate adaptation: evidence from a large video streaming service. Proc. of the 2014 ACM Conf. On SIGCOMM, Chicago, IL, USA: 187-198. https://doi.org/10.1145/2619239.2626296Institute of Telecommunications and Multimedia Applications website. Look Ahead Demo. Available online at: https://lookahead.iteam.upv.es . Accessed: Jun. (2019)ISO/IEC 23009–1:2014 (2014) Dynamic adaptive streaming over HTTP (DASH) - Part 1: media presentation description and segment formats.Juluri P, Tamarapalli V, Medhi D (2015) SARA: segment aware rate adaptation algorithm for dynamic adaptive streaming over HTTP. Proc. of the IEEE Int. Conf. On Commun. Workshop (ICCW), London, UK: 1765-1770. https://doi.org/10.1109/ICCW.2015.7247436 .Juluri P, Tamarapalli V, Medhi D (2016) QoE management in DASH systems using the segment aware rate adaptation algorithm. Proc. of the IEEE/IFIP Netw. Oper. And Manag. Symp. (NOMS), Istanbul, Turkey: 129-136. https://doi.org/10.1109/NOMS.2016.7502805 .Kua J, Armitage G, Branch P (2017) A survey of rate adaptation techniques for dynamic adaptive streaming over HTTP. IEEE Commun Surv & Tutor 19(3):1842–1866. https://doi.org/10.1109/COMST.2017.2685630Lee S, Youn K, Chung K (2015) Adaptive video quality control scheme to improve QoE of MPEG DASH. Proc. of IEEE Int. Conf. On Consum. Electron. (ICCE), Las Vegas, NV, USA: 126-127. https://doi.org/10.1109/ICCE.2015.7066348 .Li S, Zhang F, Ma L, Ngan K (2011) Image quality assessment by separately evaluating detail losses and additive impairments. IEEE Trans. on Multimed. 13-5:935–949. https://doi.org/10.1109/TMM.2011.2152382Liu C, Bouazizi I, Gabbouj M (2011) Rate adaptation for adaptive HTTP streaming. Proc. of the second annual ACM Conf. On multimed. Syst. (MMSys), San Jose, CA, USA: 169-174. https://doi.org/10.1145/1943552.1943575 .Medium webpage (2016) Toward a practical perceptual video quality metric. Available online at: https://medium.com/netflix-techblog/toward-a-practical-perceptual-video-quality-metric-653f208b9652 . Accessed: Jun. 2019.Mobile Video Service Performance Study (2015) HUAWEI white paper. Available online at: http://www.ctiforum.com/uploadfile/2015/0701/20150701091255294.pdf .Mok RKP, Luo X, Chan EWW, Chang RKC (2012) QDASH: a QoE-aware DASH system. Proc. of multim. Syst. Conf. (MMSys), Chapel Hill, NC, USA: 11-22. https://doi.org/10.1145/2155555.2155558Moldovan C, Hagn K, Sieber C, Kellerer W, Hoßfeld T (2017) Keep calm and don’t switch: about the relationship between switches and quality in HAS. Proc. of the Int. Teletraffic Congr. (ITC), Genoa, Italy: pp. 1-6. https://doi.org/10.23919/ITC.2017.8065802Müller C, Lederer S, Timmerer C (2012) An evaluation of dynamic adaptive streaming over HTTP in vehicular environments. Proc. of the 4th workshop on mob. Video (MoVid), Chapel Hill, NC, USA: 37-42. https://doi.org/10.1145/2151677.2151686Nguyen T, Vu T, Nguyen DV, Ngoc NP, and Thang TC (2015) QoE optimization for adaptive streaming with multiple VBR videos. Proc. of the Int. Conf. On comp., Manag. And Telecommun. (ComManTel), DaNang, Vietnam: 189-193. https://doi.org/10.1109/ComManTel.2015.7394285 .Qin Y, H. Shuai, Pattipati K R, Qian F, Sen S, Wang B, Yue C (2018) ABR Streaming of VBR-encoded videos: characterization, challenges, and solutions. Proc. of ACM CoNext 2018, Heraklion, Greece: 366–378. https://doi.org/10.1145/3281411.3281439 .Samain J, Carofiglio G, Muscariello L, Papalini M, Sardara M, Tortelli M, Rossi D (2017) Dynamic adaptive video streaming: towards a systematic comparison of ICN and TCP/IP. IEEE Trans on Multimed 19(10):2166–2181. https://doi.org/10.1109/TMM.2017.2733340Sheikh H, Bovik A (2006) Image information and visual quality. IEEE Trans on Image Process 15(2):430–444. https://doi.org/10.1109/TIP.2005.859378Shuai Y, Herfet T (2016). A buffer dynamic stabilizer for low-latency adaptive video streaming. Proc. of the Int. Conf. on Consum. Electron., Berlin: 1–5. https://doi.org/10.1109/ICCE-Berlin.2016.7684742 .Tavakoli S, Egger S, Seufert M, Schatz R, Brunnström K, García N (2016) Perceptual quality of HTTP adaptive streaming strategies: cross-experimental analysis of multi-laboratory and crowdsourced subjective studies. IEEE Journal on Select Areas in Commun 34-8:2141–2153. https://doi.org/10.1109/JSAC.2016.2577361Yarnagula H K, Juluri P, Mehr S K, Tamarapalli V, Medhi D (2019) QoE for Mobile clients with segment-aware rate adaptation algorithm (SARA) for DASH video streaming. ACM trans. On multimed. Comput., Commun., and Appl. (TOMM) 15(2):article no. 36 https://doi.org/10.1145/3311749 .Yin X, Sekar V, Sinopoli B (2014) Toward a principled framework to design dynamic adaptive streaming algorithms over HTTP. Proc. of the 13th ACM workshop on hot topics in Netw. (HotNets), Los Angeles, CA, USA: 1-7. https://doi.org/10.1145/2670518.2673877 .YouTube webpage (2019) Youtube press. Available online at: https://www.youtube.com/yt/about/press . Accessed: Jun. 2019.Youtube webpage, Google I/O ‘18: Building feature-rich media apps with ExoPlayer. Available online at: https://youtu.be/svdq1BWl4r8?t=2m . Published: May (2018)Yu L, Tillo T, Xiao J (2017) QoE-driven dynamic adaptive video streaming strategy with future information. IEEE Trans on Broadcast 63-3:523–534. https://doi.org/10.1109/TBC.2017.2687698Zhao S, Li Z, Medhi D, Lai P, Liu S (2017) Study of user QoE improvement for dynamic adaptive streaming over HTTP (MPEG-DASH). Proc. of the Int. Conf. On Comput., network. And Commun. (ICNC): multimed. Comput. And Commun., Santa Clara, CA, USA: 566-570. https://doi.org/10.1109/ICCNC.2017.7876191 .Zhou Y, Duan Y, Sun J, Guo Z (2014) Towards a simple and smooth rate adaption for VBR video in DASH. Proc. of the IEEE Vis. Commun. and Image Process. Conf, Valletta, pp 9–12. https://doi.org/10.1109/VCIP.2014.7051491Zhou C, Lin C-W, Guo Z (2016) mDASH: a Markov decision-based rate adaptation approach for dynamic HTTP streaming. IEEE Trans. on Multimed 18(4):738–751. https://doi.org/10.1109/TMM.2016.252265

Next-to-Leading Order Constituent Quark Structure and Hadronic Structure Functions

We calculate the partonic structure of a constituent quark in the Next-to-Leading Order framework. The structure of any hadron can be obtained thereafter using a convolution method. Such a procedure is used to generate the structure function of proton and pion in NLO, neglecting certain corrections to $\Lambda_{QCD}$. It is shown that while the constituent quark structure is generated purely perturbatively and accounts for the most part of the hadronic structure, there is a few percent contributions coming from the nonperturbative sector in the hadronic structure. This contribution plays the key role in explaining the SU(2) symmetry breaking of the nucleon sea and the observed violation of Gottfried sum rule. These effects are calculated. We obtained an Excellent agreement with the experimental data in a wide range of $x=[10^{-6}, 1]$ and $Q^{2}=[0.5, 5000]$ $GeV^{2}$ for the proton structure function. We have also calculated Pion structure and compared it with the existing data. Again, the model calculations agree rather well with the data from experiment.Comment: 32 pages,10 figures, Accepted to publish in Phys. Rev.

Wireless body sensor design for intra-vaginal temperature monitoring

Sensor nodes are small devices able to collect and retrieve sensorial data. The use of these sensors for medical purposes offers valuable contributions to improve patients’ healthcare, both for diagnosis and therapeutics monitoring. An important and common parameter used on healthcare diagnosis is the body temperature. It is monitored on several matters related with gynecological and obstetrics issues but, usually it is measure at the skin surface. Then, this paper proposes the design concepts of a new intra-body sensor for long-term intra-vaginal temperature collection. The embedded IEEE 802.15.4 communication module allows the integration of this sensor in wireless sensor networks for remote data access and monitoring. It is presented the sensor architecture, the construction of the corresponding testbed, and its performance evaluation. This sensor may be used on several applications, including fertile and ovulation period detection, and preterm labor prevention

Capturing genomic signatures of DNA sequence variation using a standard anonymous microarray platform

Comparative genomics, using the model organism approach, has provided powerful insights into the structure and evolution of whole genomes. Unfortunately, only a small fraction of Earth's biodiversity will have its genome sequenced in the foreseeable future. Most wild organisms have radically different life histories and evolutionary genomics than current model systems. A novel technique is needed to expand comparative genomics to a wider range of organisms. Here, we describe a novel approach using an anonymous DNA microarray platform that gathers genomic samples of sequence variation from any organism. Oligonucleotide probe sequences placed on a custom 44 K array were 25 bp long and designed using a simple set of criteria to maximize their complexity and dispersion in sequence probability space. Using whole genomic samples from three known genomes (mouse, rat and human) and one unknown (Gonystylus bancanus), we demonstrate and validate its power, reliability, transitivity and sensitivity. Using two separate statistical analyses, a large numbers of genomic ‘indicator’ probes were discovered. The construction of a genomic signature database based upon this technique would allow virtual comparisons and simple queries could generate optimal subsets of markers to be used in large-scale assays, using simple downstream techniques. Biologists from a wide range of fields, studying almost any organism, could efficiently perform genomic comparisons, at potentially any phylogenetic level after performing a small number of standardized DNA microarray hybridizations. Possibilities for refining and expanding the approach are discussed

Prescribing patterns of low doses of antipsychotic medications in older Asian patients with schizophrenia, 2001-2009

Background: This study examined the use of low doses of antipsychotic medications (300mg/day CPZeq or less) in older Asian patients with schizophrenia and its demographic and clinical correlates. Methods: Information on hospitalized patients with schizophrenia, aged 55 years or older, was extracted from the database of the Research on Asian Psychotropic Prescription Patterns (REAP) study (2001-2009). Data on 1,452 patients in eight Asian countries and territories including China, Hong Kong, Japan, Korea, Singapore, Taiwan, India, and Malaysia were analyzed. Sociodemographic and clinical characteristics and antipsychotic prescriptions were recorded using a standardized protocol and data collection procedure. Results: The prescription frequency for low doses of antipsychotic medications was 40.9% in the pooled sample. Multiple logistic regression analysis of the whole sample showed that patients on low doses of antipsychotic medications were more likely to be female, have an older age, a shorter length of illness, and less positive symptoms. Of patients in the six countries and territories that participated in all the surveys between 2001 and 2009, those in Japan were less likely to receive low doses of antipsychotics. Conclusion: Low doses of antipsychotic medications were only applied in less than half of older Asian patients with schizophreni

Differentiating Non-Motor Symptoms in Parkinson's Disease from Controls and Hemifacial Spasm

10.1371/journal.pone.0049596PLoS ONE82

Making sense of the evolving nature of depression narratives and their inherent conflicts

Originally a psychiatric diagnosis fashioned by Western psychiatry in the 20th Century, depression evolved to encompass varying lineages of discourse and care. This article elucidates some of the current challenges – as well as emerging discourses – influencing the category of depression. Depression-like experiences are shaped by (at times conflicting) subjectivities, claims to knowledge, material realities, social contexts and access to resources. With no unified understanding of the category of ‘depression’ available, lay people, social and neuro scientists, GPs, psychiatrists, talking therapists and pharmaceutical companies all attempt to shape narratives of depression. The current paper focuses on patient narratives about depression – in the context of these wider debates – to better elucidate the ways in which depression discourses are publically developing along varying lines. In conclusion, the paper suggests that we could better conceptualise the resulting ‘depression(s)’ with concepts such as ‘society of mind’ and notions of subjectivity unbounded by individuals

Significant quantum effects in hydrogen activation

Dissociation of molecular hydrogen is an important step in a wide variety of chemical, biological, and physical processes. Due to the light mass of hydrogen, it is recognized that quantum effects are often important to its reactivity. However, understanding how quantum effects impact the reactivity of hydrogen is still in its infancy. Here, we examine this issue using a well-defined Pd/Cu(111) alloy that allows the activation of hydrogen and deuterium molecules to be examined at individual Pd atom surface sites over a wide range of temperatures. Experiments comparing the uptake of hydrogen and deuterium as a function of temperature reveal completely different behavior of the two species. The rate of hydrogen activation increases at lower sample temperature, whereas deuterium activation slows as the temperature is lowered. Density functional theory simulations in which quantum nuclear effects are accounted for reveal that tunneling through the dissociation barrier is prevalent for H2 up to ∼190 K and for D2 up to ∼140 K. Kinetic Monte Carlo simulations indicate that the effective barrier to H2 dissociation is so low that hydrogen uptake on the surface is limited merely by thermodynamics, whereas the D2 dissociation process is controlled by kinetics. These data illustrate the complexity and inherent quantum nature of this ubiquitous and seemingly simple chemical process. Examining these effects in other systems with a similar range of approaches may uncover temperature regimes where quantum effects can be harnessed, yielding greater control of bond-breaking processes at surfaces and uncovering useful chemistries such as selective bond activation or isotope separation