Progressive Damage Analysis of Laminated Composite (PDALC) (A Computational Model Implemented in the NASA COMET Finite Element Code)

A method for analysis of progressive failure in the Computational Structural Mechanics Testbed is presented in this report. The relationship employed in this analysis describes the matrix crack damage and fiber fracture via kinematics-based volume-averaged damage variables. Damage accumulation during monotonic and cyclic loads is predicted by damage evolution laws for tensile load conditions. The implementation of this damage model required the development of two testbed processors. While this report concentrates on the theory and usage of these processors, a complete listing of all testbed processors and inputs that are required for this analysis are included. Sample calculations for laminates subjected to monotonic and cyclic loads were performed to illustrate the damage accumulation, stress redistribution, and changes to the global response that occurs during the loading history. Residual strength predictions made with this information compared favorably with experimental measurements

Unconformities and Age Relationships, Tongue River and Older Members of the Fort Union Formation (Paleocene), Western Williston Basin, U.S.A.

An unconformable relationship is observed within the Paleocene Fort Union Formation in the western Williston Basin at the contact between the Tongue River Member and the underlying Lebo and Ludlow Members. Isotopic dates and pollen biozone data reported here are integrated with previously published data. A new correlation of these facies results in a revised history of localized depositional and tectonic events. One unconformity occurs at this lithological contact in the Pine Hills (PH), Terry Badlands (TB), and Ekalaka (E) areas west of the Cedar Creek anticline (CCA), and another unconformity occurs at the same lithological contact in the Little Missouri River (LMR) area east of the CCA. The two unconformities differ in age by about two million years. The older is the U2 and the younger is the U3 , which initially were recognized in the Ekalaka area of southeastern Montana (Belt et al., 2002). The U2 crops out in the TB, PH, and E areas, where at least 85 m of Tongue River strata bearing palynomorphs characteristic of biozone P-3 are found above the unconformity. Radiometric dates from strata (bearing palynomorphs characteristic of biozone P-2) below the U2 range in age from 64.0 to 64.73 Ma. The U2 unconformity west of the CCA thus occurs in strata near the base of the lower P-3 biozone. The U3 crops out in the LMR area (east of the CCA), where only 13 m of strata characterized by the P-3 pollen biozone occur above it. Radiometric dates from an ash \u3c1 m above the U3 in that area range in age from 61.03 to 61.23 Ma, and the P-3/P-4 pollen biozone boundary is located 13 m above the ashes. The U3 thus occurs in strata characterized by upper parts of the P-3 pollen biozone east of the CCA. The U3 is also identifiable in the middle of the ca. 200 m-thick Tongue River Member west of the CCA, where mammal sites 40 to 80 m above it are Tiffanian-3 in age. The strata below this unconformity are tilted gently to the northwest; strata above the unconformity are flat lying. This mid Tongue River unconformity probably correlates with the unconformity at the base of the Tongue River Member in the LMR area east of the CCA, where a Ti-2 mammal site (the “X-X” locality) occurs \u3c10 m above it. Depositional and tectonic events can be summarized using North American Mammal Age nomenclature as a relative time scale. From latest Cretaceous through Puercan time, paleodrainage was toward the east or southeast, in the direction of the Cannonball Sea. The Black Hills did not serve as an obstruction at that time. During early Torrejonian time, the Miles City arch (MCA) and Black Hills were uplifted and partially eroded, leading to the U2 unconformity. When deposition resumed, paleodrainages shifted to a northeasterly course. During middle and late Torrejonian time, facies of the lower Tongue River (“Dominy”) sequence and the Ekalaka Member of the Fort Union Formation were deposited in the middle of a subbasin between the MCA and the CCA. Simultaneously, smectite-rich components of the Ludlow Member were being deposited east of the CCA. During latest Torrejonian time, uplift of the Black Hills tilted the “Dominy” sequence toward the northwest and local erosion led to the U3 unconformity. Following this tilting, during Tiffanian time, deposition of the upper Tongue River (“Knobloch”) sequence shows continuity from western North Dakota across eastern Montana and into the northern Powder River Basin

Evidence for Marine Influence on a Low-Gradient Coastal Plain: Ichnology and Invertebrate Paleontology of the Lower Tongue River Member (Fort Union Formation, Middle Paleocene), Western Williston Basin, U.S.A.

The Paleocene Tongue River Member of the Fort Union Formation contains trace-fossil associations indicative of marine influence in otherwise freshwater facies. The identified ichnogenera include: Arenicolites, Diplocraterion, Monocraterion, Ophiomorpha, Rhizocorallium, Skolithos linearis, Teichichnus, Thalassinoides, and one form of uncertain affinity. Two species of the marine diatom Coscinodiscus occur a few meters above the base of the member. The burrows occur in at least five discrete, thin, rippled, fine-grained sandstone beds within the lower 85 m of the member west of the Cedar Creek anticline (CCA) in the Signal Butte, Terry Badlands, and Pine Hills areas. Two discrete burrowed beds are found in the lower 10 m of the member east of the CCA in the little Missouri River area. Abundant freshwater ostracodes include Bisulcocypridea arvadensis, Candona, and Cypridopsis. Freshwater bivalves include Plesielliptio and Pachydon mactriformis. We recognize four fossil assemblages that represent fluvio-lacustrine, proximal estuarine, central estuarine, and distal estuarine environments. Biostratal alternations between fresh- and brackish-water assemblages indicate that the Tongue River Member was deposited along a low-gradient coastal plain that was repeatedly inundated from the east by the Cannonball Sea. The existence of marine-influenced beds in the Tongue River Member invalidates the basis for the Slope Formation

Design, assessment, and in vivo evaluation of a computational model illustrating the role of CAV1 in CD4+ T-lymphocytes

Caveolin-1 (CAV1) is a vital scaffold protein heterogeneously expressed in both healthy and malignant tissue. We focus on the role of CAV1 when overexpressed in T-cell leukemia. Previously, we have shown that CAV1 is involved in cell-to-cell communication, cellular proliferation, and immune synapse formation; however, the molecular mechanisms have not been elucidated. We hypothesize that the role of CAV1 in immune synapse formation contributes to immune regulation during leukemic progression, thereby warranting studies of the role of CAV1 in CD4+ T-cells in relation to antigen-presenting cells. To address this need, we developed a computational model of a CD4+ immune effector T-cell to mimic cellular dynamics and molecular signaling under healthy and immunocompromised conditions (i.e., leukemic conditions). Using the Cell Collective computational modeling software, the CD4+ T-cell model was constructed and simulated under CAV1+/+, CAV1+/−, and CAV1−/− conditions to produce a hypothetical immune response. This model allowed us to predict and examine the heterogeneous effects and mechanisms of CAV1 in silico. Experimental results indicate a signature of molecules involved in cellular proliferation, cell survival, and cytoskeletal rearrangement that were highly affected by CAV1 knock out. With this comprehensive model of a CD4+ T-cell, we then validated in vivo protein expression levels. Based on this study, we modeled a CD4+ T-cell, manipulated gene expression in immunocompromised versus competent settings, validated these manipulations in an in vivo murine model, and corroborated acute T-cell leukemia gene expression profiles in human beings. Moreover, we can model an immunocompetent versus an immunocompromised microenvironment to better understand how signaling is regulated in patients with leukemia

Seasonal forage quality of rangelands across Kansas

The K-State Research and Extension Forage Task Force surveyed Kansas rangelands during the course of seasonal changes to enable producers and managers to better estimate the feed value of their pasture forage during particular times of the year. Kansas’ two distinct rangeland vegetation types, shortgrass and tallgrass prairie, were evaluated. Forage samples were collected monthly from two rangeland sites in each of 10 Kansas counties. Tallgrass vegetation was lowest in acid detergent fiber (ADF) and greatest in crude protein (CP) from May to July, and rapidly increased in ADF and declined in CP the rest of the season. Shortgrass vegetation was also lower in ADF and greater in CP from May to July, but changed less from early summer to the winter than did tallgrass vegetation. Degradable intake protein (DIP) was greatest for tallgrass vegetation in May. Otherwise DIP was similar between tallgrass and shortgrass except in February and March when shortgrass had greater DIP. DIP was greatest in May and June for both vegetation types and gradually declined from June to December. Undegradable intake protein (UIP) values were greater for tallgrass vegetation than for shortgrass vegetation from May through July, but all other months were similar. Seasonal forage quality is different between and within rangeland vegetation types, and identification of dominant vegetation is a key determinant in choosing appropriate animal nutritional management strategies

ERK1/2 signaling dominates over RhoA signaling in regulating early changes in RNA expression induced by endothelin-1 in neonatal rat cardiomyocytes

Cardiomyocyte hypertrophy is associated with changes in gene expression. Extracellular signal-regulated kinases 1/2 (ERK1/2) and RhoA [activated by hypertrophic agonists (e.g. endothelin-1)] regulate gene expression and are implicated in the response, but their relative significance in regulating the cardiomyocyte transcriptome is unknown. Our aim was to establish the significance of ERK1/2 and/or RhoA in the early cardiomyocyte transcriptomic response to endothelin-1.Cardiomyocytes were exposed to endothelin-1 (1 h) with/without PD184352 (to inhibit ERK1/2) or C3 transferase (C3T, to inhibit RhoA). RNA expression was analyzed using microarrays and qPCR. ERK1/2 signaling positively regulated approximately 65% of the early gene expression response to ET-1 with a small (approximately 2%) negative effect, whereas RhoA signaling positively regulated approximately 10% of the early gene expression response to ET-1 with a greater (approximately 14%) negative contribution. Of RNAs non-responsive to endothelin-1, 66 or 448 were regulated by PD184352 or C3T, respectively, indicating that RhoA had a more significant effect on baseline RNA expression. mRNAs upregulated by endothelin-1 encoded a number of receptor ligands (e.g. Ereg, Areg, Hbegf) and transcription factors (e.g. Abra/Srf) that potentially propagate the response.ERK1/2 dominates over RhoA in the early transcriptomic response to endothelin-1. RhoA plays a major role in maintaining baseline RNA expression but, with upregulation of Abra/Srf by endothelin-1, RhoA may regulate changes in RNA expression over longer times. Our data identify ERK1/2 as a more significant node than RhoA in regulating the early stages of cardiomyocyte hypertrophy

Tertiary-Treated Municipal Wastewater is a Significant Point Source of Antibiotic Resistance Genes Into Duluth-Superior Harbor

In this study, the impact of tertiary-treated municipal wastewater on the quantity of several antibiotic resistance determinants in Duluth-Superior Harbor was investigated by collecting surface water and sediment samples from 13 locations in Duluth-Superior Harbor, the St. Louis River, and Lake Superior. Quantitative PCR (qPCR) was used to target three different genes encoding resistance to tetracycline (tet(A), tet(X), and tet(W)), the gene encoding the integrase of class 1 integrons (intI1), and total bacterial abundance (16S rRNA genes) as well as total and human fecal contamination levels (16S rRNA genes specific to the genus Bacteroides). The quantities of tet(A), tet(X), tet(W), intI1, total Bacteroides, and human-specific Bacteroides were typically 20-fold higher in the tertiary-treated wastewater than in nearby surface water samples. In contrast, the quantities of these genes in the St. Louis River and Lake Superior were typically below detection. Analysis of sequences of tet(W) gene fragments from four different samples collected throughout the study site supported the conclusion that tertiary-treated municipal wastewater is a point source of resistance genes into Duluth-Superior Harbor. This study demonstrates that the discharge of exceptionally treated municipal wastewater can have a statistically significant effect on the quantities of antibiotic resistance genes in otherwise pristine surface waters

BioTIME: A database of biodiversity time series for the Anthropocene.

MotivationThe BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community-led open-source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal patterns of biodiversity in the Anthropocene.Main types of variables includedThe database contains 8,777,413 species abundance records, from assemblages consistently sampled for a minimum of 2 years, which need not necessarily be consecutive. In addition, the database contains metadata relating to sampling methodology and contextual information about each record.Spatial location and grainBioTIME is a global database of 547,161 unique sampling locations spanning the marine, freshwater and terrestrial realms. Grain size varies across datasets from 0.0000000158 km2 (158 cm2) to 100 km2 (1,000,000,000,000 cm2).Time period and grainBioTIME records span from 1874 to 2016. The minimal temporal grain across all datasets in BioTIME is a year.Major taxa and level of measurementBioTIME includes data from 44,440 species across the plant and animal kingdoms, ranging from plants, plankton and terrestrial invertebrates to small and large vertebrates.Software format.csv and .SQL

15th Annual Environmental Law Institute

Materials from the 15th Annual Environmental Law Institute held by UK/CLE in March 1999