Caveats for information bottleneck in deterministic scenarios

Information bottleneck (IB) is a method for extracting information from one random variable $X$ that is relevant for predicting another random variable $Y$. To do so, IB identifies an intermediate "bottleneck" variable $T$ that has low mutual information $I(X;T)$ and high mutual information $I(Y;T)$. The "IB curve" characterizes the set of bottleneck variables that achieve maximal $I(Y;T)$ for a given $I(X;T)$, and is typically explored by maximizing the "IB Lagrangian", $I(Y;T) - \beta I(X;T)$. In some cases, $Y$ is a deterministic function of $X$, including many classification problems in supervised learning where the output class $Y$ is a deterministic function of the input $X$. We demonstrate three caveats when using IB in any situation where $Y$ is a deterministic function of $X$: (1) the IB curve cannot be recovered by maximizing the IB Lagrangian for different values of $\beta$; (2) there are "uninteresting" trivial solutions at all points of the IB curve; and (3) for multi-layer classifiers that achieve low prediction error, different layers cannot exhibit a strict trade-off between compression and prediction, contrary to a recent proposal. We also show that when $Y$ is a small perturbation away from being a deterministic function of $X$, these three caveats arise in an approximate way. To address problem (1), we propose a functional that, unlike the IB Lagrangian, can recover the IB curve in all cases. We demonstrate the three caveats on the MNIST dataset

An evaluation of intrusive instrumental intelligibility metrics

Instrumental intelligibility metrics are commonly used as an alternative to listening tests. This paper evaluates 12 monaural intrusive intelligibility metrics: SII, HEGP, CSII, HASPI, NCM, QSTI, STOI, ESTOI, MIKNN, SIMI, SIIB, and $\text{sEPSM}^\text{corr}$. In addition, this paper investigates the ability of intelligibility metrics to generalize to new types of distortions and analyzes why the top performing metrics have high performance. The intelligibility data were obtained from 11 listening tests described in the literature. The stimuli included Dutch, Danish, and English speech that was distorted by additive noise, reverberation, competing talkers, pre-processing enhancement, and post-processing enhancement. SIIB and HASPI had the highest performance achieving a correlation with listening test scores on average of $\rho=0.92$ and $\rho=0.89$, respectively. The high performance of SIIB may, in part, be the result of SIIBs developers having access to all the intelligibility data considered in the evaluation. The results show that intelligibility metrics tend to perform poorly on data sets that were not used during their development. By modifying the original implementations of SIIB and STOI, the advantage of reducing statistical dependencies between input features is demonstrated. Additionally, the paper presents a new version of SIIB called $\text{SIIB}^\text{Gauss}$, which has similar performance to SIIB and HASPI, but takes less time to compute by two orders of magnitude.Comment: Published in IEEE/ACM Transactions on Audio, Speech, and Language Processing, 201

Interictal depression, anxiety, personality traits, and psychological dissociation in patients with temporal lobe epilepsy (TLE) and extra- TLE.

De samenhang tussen somatische en psychische (dys)functie

Isolation and characterization of two specific regulatory Aspergillus niger mutants shows antagonistic regulation of arabinan and xylan metabolism

This paper describes two Aspergillus niger mutants (araA and araB) specifically disturbed in the regulation of the arabinanase system in response to the presence of L-arabinose. Expression of the three known L-arabinose-induced arabinanolytic genes, abfA, abfB and abnA, was substantially decreased or absent in the araA and araB strains compared to the wild-type when incubated in the presence of L-arabinose or L-arabitol. In addition, the intracellular activities Of L-arabitol dehydrogenase and L-arabinose reductase, involved in L-arabinose catabolism, were decreased in the araA and araB strains. Finally, the data show that the gene encoding D-xylulose kinase, xkiA, is also under control of the arabinanolytic regulatory system. L-Arabitol, most likely the true inducer of the arabinanolytic and L-arabinose catabolic genes, accumulated to a high intracellular concentration in the araA and araB mutants. This indicates that the decrease of expression of the arabinanolytic genes was not due to lack of inducer accumulation. Therefore, it is proposed that the araA and araB mutations are localized in positive-acting components of the regulatory system involved in the expression of the arabinanase-encoding genes and the genes encoding the L-arabinose catabolic pathway

Multidimensional rasch models for partial credit scoring

Rasch models for partial-credit scoring are discussed and a multidimensional version of the model is formulated. A model may be specified in which consecutive item responses depend on an underlying latent trait. In the multidimensional partial-credit model, different responses may be explained by different latent traits. Data from van Kuyk’s (1988) size concept test and the Raven Progressive Matrices test were analyzed. Maximum likelihood estimation and goodness-of-fit testing are discussed and applied to these datasets. Goodness-of-fit statistics show that for both tests, multidimensional partial-credit models were more appropriate than the unidimensional partial-credit model. Index terms: X2 testing, exponential family model, multidimensional item response theory, multidimensional Rasch model, partial-credit models, Progressive Matrices test, Rasch model

Effect of rehabilitation worker input on visual function outcomes in individuals with low vision: study protocol for a randomised controlled trial

BACKGROUND: Visual Rehabilitation Officers help people with a visual impairment maintain their independence. This intervention adopts a flexible, goal-centred approach, which may include training in mobility, use of optical and non-optical aids, and performance of activities of daily living. Although Visual Rehabilitation Officers are an integral part of the low vision service in the United Kingdom, evidence that they are effective is lacking. The purpose of this exploratory trial is to estimate the impact of a Visual Rehabilitation Officer on self-reported visual function, psychosocial and quality-of-life outcomes in individuals with low vision. METHODS/DESIGN: In this exploratory, assessor-masked, parallel group, randomised controlled trial, participants will be allocated either to receive home visits from a Visual Rehabilitation Officer (n = 30) or to a waiting list control group (n = 30) in a 1:1 ratio. Adult volunteers with a visual impairment, who have been identified as needing rehabilitation officer input by a social worker, will take part. Those with an urgent need for a Visual Rehabilitation Officer or who have a cognitive impairment will be excluded. The primary outcome measure will be self-reported visual function (48-item Veterans Affairs Low Vision Visual Functioning Questionnaire). Secondary outcome measures will include psychological and quality-of-life metrics: the Patient Health Questionnaire (PHQ-9), the Warwick-Edinburgh Mental Well-being Scale (WEMWBS), the Adjustment to Age-related Visual Loss Scale (AVL-12), the Standardised Health-related Quality of Life Questionnaire (EQ-5D) and the UCLA Loneliness Scale. The interviewer collecting the outcomes will be masked to the group allocations. The analysis will be undertaken on a complete case and intention-to-treat basis. Analysis of covariance (ANCOVA) will be applied to follow-up questionnaire scores, with the baseline score as a covariate. DISCUSSION: This trial is expected to provide robust effect size estimates of the intervention effect. The data will be used to design a large-scale randomised controlled trial to evaluate fully the Visual Rehabilitation Officer intervention. A rigorous evaluation of Rehabilitation Officer input is vital to direct a future low vision rehabilitation strategy and to help direct government resources. TRIAL REGISTRATION: The trial was registered with ( ISRCTN44807874 ) on 9 March 2015

European consensus meeting of ARM-Net members concerning diagnosis and early management of newborns with anorectal malformations.

The ARM-Net (anorectal malformation network) consortium held a consensus meeting in which the classification of ARM and preoperative workup were evaluated with the aim of improving monitoring of treatment and outcome. The Krickenbeck classification of ARM and preoperative workup suggested by Levitt and Peña, used as a template, were discussed, and a collaborative consensus was achieved. The Krickenbeck classification is appropriate in describing ARM for clinical use. The preoperative workup was slightly modified. In males with a visible fistula, no cross-table lateral X-ray is needed and an anoplasty or (mini-) posterior sagittal anorectoplasty can directly be performed. In females with a small vestibular fistula (Hegar size 5 mm, and in the meantime, gentle painless dilatations can be performed. In both male and female perineal fistula and either a low birth weight (<2,000 g) or severe associated congenital anomalies, prolonged preoperative painless dilatations might be indicated to decrease perioperative morbidity caused by general anesthesia. The Krickenbeck classification is appropriate in describing ARM for clinical use. Some minor modifications to the preoperative workup by Levitt and Peña have been introduced in order to refine terminology and establish a comprehensive preoperative workup