13 research outputs found
Delimitation of the genus Schizachyrium (Poaceae, Andropogoneae) based on molecular and morphological data
Schizachyrium (Poaceae, Andropogoneae) includes about 60 species distributed in tropical and subtropical regions of the world. In all recent molecular phylogenies of Andropogoneae, representatives of Schizachyrium appear closely related to Andropogon species. The objective of this study was to contribute to the delimitation of Schizachyrium. We performed a phylogenetic study including 38 taxa (>63%) of Schizachyrium, along with representatives of related genera, mainly of Andropogon, yielding a total of 49 taxa. This is the first phylogenetic analysis to include the type species of Schizachyrium, S. condensatum. DNA sequences of two plastid markers (ndhF and trnL-F) were analyzed under Bayesian methods. The results indicate that Schizachyrium is not monophyletic: 26 of the 38 Schizachyrium taxa analyzed are placed in a Schizachyrium s.s. clade that includes the type species of the genus, while 10 taxa are related to Andropogon species and two other species, S. delavayi (from China and India) and S. jeffreysii (from Africa), appear clearly separated. Additionally, 58 morphological characters (41 qualitative and 17 quantitative) were scored for the same 49 taxa and analyzed under the parsimony criterion. Character optimizations showed that (i) the reduced pedicellate spikelets, (ii) with lower glume less than or equal to 0.5 mm wide, (iii) awned, and (iv) without lemma and palea support the Schizachyrium s.s. clade. We propose these four characters as diagnostic features for the delimitation of Schizachyrium s.s.Fil: Peichoto, Myriam Carolina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; ArgentinaFil: Moreno, Ercilia Maria Sara. Universidad Nacional del Nordeste. Facultad de Ciencias Exactas y Naturales y Agrimensura; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste; ArgentinaFil: Welker, Cassiano A. D.. Universidade Federal de Uberlandia; BrasilFil: Solis Neffa, Viviana Griselda. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; ArgentinaFil: Scataglini, María Amalia. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto de Botánica Darwinion. Academia Nacional de Ciencias Exactas, Físicas y Naturales. Instituto de Botánica Darwinion; Argentin
A worldwide phylogenetic classification of the Poaceae (Gramineae) III: An update
We present an updated worldwide phylogenetic classification of Poaceae with 11 783 species in 12 subfamilies, 7 supertribes, 54 tribes, 5 super subtribes, 109 subtribes, and 789 accepted genera. The subfamilies (in descending order based on the number of species) are Pooideae with 4126 species in 219 genera, 15 tribes, and 34 subtribes; Panicoideae with 3325 species in 242 genera, 14 tribes, and 24 subtribes; Bambusoideae with 1698 species in 136 genera, 3 tribes, and 19 subtribes; Chloridoideae with 1603 species in 121 genera, 5 tribes, and 30 subtribes; Aristidoideae with 367 species in three genera and one tribe; Danthonioideae with 292 species in 19 genera and 1 tribe; Micrairoideae with 192 species in nine genera and three tribes; Oryzoideae with 117 species in 19 genera, 4 tribes, and 2 subtribes; Arundinoideae with 36 species in 14 genera and 3 tribes; Pharoideae with 12 species in three genera and one tribe; Puelioideae with 11 species in two genera and two tribes; and the Anomochlooideae with four species in two genera and two tribes. Two new tribes and 22 new or resurrected subtribes are recognized. Forty-five new (28) and resurrected (17) genera are accepted, and 24 previously accepted genera are placed in synonymy. We also provide an updated list of all accepted genera including common synonyms, genus authors, number of species in each accepted genus, and subfamily affiliation. We propose Locajonoa, a new name and rank with a new combination, L. coerulescens. The following seven new combinations are made in Lorenzochloa: L. bomanii, L. henrardiana, L. mucronata, L. obtusa, L. orurensis, L. rigidiseta, and L. venusta.Fil: Soreng, Robert J.. National Museum of Natural History; Estados UnidosFil: Peterson, Paul M.. National Museum of Natural History; Estados UnidosFil: Zuloaga, Fernando Omar. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto de Botánica Darwinion. Academia Nacional de Ciencias Exactas, Físicas y Naturales. Instituto de Botánica Darwinion; ArgentinaFil: Romaschenko, Konstantin. National Museum of Natural History; Estados UnidosFil: Clark, Lynn G.. IOWA STATE UNIVERSITY (ISU);Fil: Teisher, Jordan K.. No especifíca;Fil: Gillespie, Lynn J.. No especifíca;Fil: Barberá, Patricia. No especifíca;Fil: Welker, Cassiano A. D.. No especifíca;Fil: Kellogg, Elizabeth A.. Donald Danforth Plant Science Center; Estados UnidosFil: Li, De Zhu. No especifíca;Fil: Davidse, Gerrit. No especifíca
Data from: Phylogenomics of Andropogoneae (Panicoideae: Poaceae) of mainland Southeast Asia
The grass tribe Andropogoneae is distributed in warm regions around the globe but has been poorly studied in mainland Southeast Asia. This is particularly true for the cosmopolitan genera Andropogon and Schizachyrium, with several species that appear to be narrowly distributed in this region. Additionally, lesser-known species in the genera Hemisorghum, Kerriochloa, and Pseudosorghum also occur in mainland Southeast Asia. A phylogeny is needed to address questions of taxonomy and trait evolution. Whole chloroplast genomes of Andropogoneae species and two outgroup species of Garnotia (tribe Arundinelleae) were analyzed using maximum likelihood (ML) and Bayesian inference (BI). Ancestral character states were reconstructed using ML for four morphological characters key to Andropogon and Schizachyrium identification. A previously-unidentified clade of Southeast Asian endemic taxa is found, including one species formerly classified in Andropogon. Other Southeast Asian taxa fall in an unresolved grade outside the major radiation of the tribe. Andropogon and Schizachyrium are both polyphyletic. Convergent evolution and reversal of characters are common throughout Andropogoneae. Addition of species from mainland Southeast Asian finds unexpected phylogenetic diversity. Southeast Asian Schizachyrium sanguineum forms two separate clades, which could reflect cryptic species differentiation, hybridization, introgression, or some combination
A New Allopolyploid Species of Saccharum (Poaceae ‐ Andropogoneae) from South America, with Notes on its Cytogenetics
Allopolyploidy is a major mode of speciation in flowering plants and particularly in the grass tribe Andropogoneae, which includessugarcane (Saccharum officinarum) and relatives. A new species of Saccharum from South America (S. intermedium) is described here, supported bymorphological, molecular and cytogenetic evidence. Previous molecular analyses indicated an allopolyploid origin of the new species throughinterspecific hybridization between S. angustifolium and S. villosum. The new taxon has intermediate morphology between the two parental species.Cytogenetic analyses of the three species were performed, including chromosome counts, meiotic regularity, and pollen viability and morphology.The new taxon is hexaploid (2n = 60), while the parental species are triploids (2n = 30), confirming the ploidy level suggested by the number ofparalogues in phylogenetic trees based on low-copy nuclear genes. This represents the first chromosome count for S. intermedium and a new cytotypefor S. villosum. Although both parental species are triploids, they surprisingly exhibited regular meiosis and high pollen viability, indicating they aremale-fertile, as is the hexaploid new species. Data on geographic distribution and phenology is also presented, aswell as a key for the South Americanspecies of Saccharum.Fil: Welker, Cassiano A. D.. Universidade Federal de Uberlandia; BrasilFil: Souza Chies, Tatiana T.. Universidade Federal do Rio Grande do Sul; BrasilFil: Peichoto, Myriam Carolina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; ArgentinaFil: Oliveira, Reyjane P.. Universidade Estadual de Feira de Santana; BrasilFil: Carvalho, Luana C.. Universidade Federal do Rio Grande do Sul; BrasilFil: Muccillo, Victória B. S.. Universidade Federal do Rio Grande do Sul; BrasilFil: Kellogg, Elizabeth Anne. Donald Danforth Plant Science Center; Estados UnidosFil: Kaltchuk-Santos, Eliane. Universidade Federal do Rio Grande do Sul; Brasi
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Phylogenomics and the rise of the angiosperms.
Angiosperms are the cornerstone of most terrestrial ecosystems and human livelihoods1,2. A robust understanding of angiosperm evolution is required to explain their rise to ecological dominance. So far, the angiosperm tree of life has been determined primarily by means of analyses of the plastid genome3,4. Many studies have drawn on this foundational work, such as classification and first insights into angiosperm diversification since their Mesozoic origins5-7. However, the limited and biased sampling of both taxa and genomes undermines confidence in the tree and its implications. Here, we build the tree of life for almost 8,000 (about 60%) angiosperm genera using a standardized set of 353 nuclear genes8. This 15-fold increase in genus-level sampling relative to comparable nuclear studies9 provides a critical test of earlier results and brings notable change to key groups, especially in rosids, while substantiating many previously predicted relationships. Scaling this tree to time using 200 fossils, we discovered that early angiosperm evolution was characterized by high gene tree conflict and explosive diversification, giving rise to more than 80% of extant angiosperm orders. Steady diversification ensued through the remaining Mesozoic Era until rates resurged in the Cenozoic Era, concurrent with decreasing global temperatures and tightly linked with gene tree conflict. Taken together, our extensive sampling combined with advanced phylogenomic methods shows the deep history and full complexity in the evolution of a megadiverse clade