Fibromyalgie et autres douleurs neuropathiques : l'amitriptyline n'est pas la panacée

Les douleurs neuropathiques ou associées à la fibromyalgie sont difficiles à traiter et limitent la qualité de vie des personnes atteintes. La pratique actuelle tend à combiner des thérapies physiques et/ou cognitives avec des interventions pharmacologiques. L'amitriptyline est un antidépresseur tricyclique couramment utilisé pour traiter la fibromyalgie ou les douleurs neuropathiques, bien que son indication première ne soit pas le traitement de ces affections. Cette revue systématique mise à jour a évalué l'efficacité analgésique de l'amitriptyline dans le traitement des douleurs précitées ainsi que les effets indésirables associés

Microtechnology in Space Bioreactors

Space biology is a young and rapidly developing discipline comprising basic research and biotechnology. In the next decades it will play a prominent role in the International Space Station (ISS). Therefore, there is an increasing demand for sophisticated instrumentation to satisfy the requirements of the future projects in space biology. Bioreactors will be needed to supply fresh living material (cells and tissues) either to study still obscure basic biological mechanisms or to develop profitable bioprocesses which will take advantage of the peculiar microgravity conditions. Since more than twenty years, the Space Biology Group of the ETHZ is carrying out research projects in space (Space Shuttle/Spacelab, MIR Station, satellites, and sounding rockets) that involve also the development of space-qualified instrumentation. In the last ten years we have developed, in collaboration with Mecanex SA, Nyon, and the Institute of Microtechnology of the University of Neuchatel, a space bioreactor for the continuous culture of yeast cells under controlled conditions. Sensors, pH control, nutrients pump and fluid flowmeter are based on state-of-the-art silicon technology. After two successful space flights, a further improved version is presently prepared for a flight in the year 2000

PRI: Re-Analysis of a Public Mass Cytometry Dataset Reveals Patterns of Effective Tumor Treatments

Recently, mass cytometry has enabled quantification of up to 50 parameters for millions of cells per sample. It remains a challenge to analyze such high-dimensional data to exploit the richness of the inherent information, even though many valuable new analysis tools have already been developed. We propose a novel algorithm “pattern recognition of immune cells (PRI)” to tackle these high-dimensional protein combinations in the data. PRI is a tool for the analysis and visualization of cytometry data based on a three or more-parametric binning approach, feature engineering of bin properties of multivariate cell data, and a pseudo-multiparametric visualization. Using a publicly available mass cytometry dataset, we proved that reproducible feature engineering and intuitive understanding of the generated bin plots are helpful hallmarks for re-analysis with PRI. In the CD4 + T cell population analyzed, PRI revealed two bin-plot patterns (CD90/CD44/CD86 and CD90/CD44/CD27) and 20 bin plot features for threshold-independent classification of mice concerning ineffective and effective tumor treatment. In addition, PRI mapped cell subsets regarding co-expression of the proliferation marker Ki67 with two major transcription factors and further delineated a specific Th1 cell subset. All these results demonstrate the added insights that can be obtained using the non-cluster-based tool PRI for re-analyses of high-dimensional cytometric data

The Conserved Nup107-160 Complex Is Critical for Nuclear Pore Complex Assembly

AbstractNuclear pore complexes (NPCs) are large multiprotein assemblies that allow traffic between the cytoplasm and the nucleus. During mitosis in higher eukaryotes, the Nuclear Envelope (NE) breaks down and NPCs disassemble. How NPCs reassemble and incorporate into the NE upon mitotic exit is poorly understood. We demonstrate a function for the conserved Nup107-160 complex in this process. Partial in vivo depletion of Nup133 or Nup107 via RNAi in HeLa cells resulted in reduced levels of multiple nucleoporins and decreased NPC density in the NE. Immunodepletion of the entire Nup107-160 complex from in vitro nuclear assembly reactions produced nuclei with a continuous NE but no NPCs. This phenotype was reversible only if Nup107-160 complex was readded before closed NE formation. Depletion also prevented association of FG-repeat nucleoporins with chromatin. We propose a stepwise model in which postmitotic NPC assembly initiates on chromatin via early recruitment of the Nup107-160 complex

Development of a Space Bioreactor using Microtechnology

A miniature bio-reactor for the cultivation of cells aboard Spacelab is presented. Yeast cells are grown in a 3 milliliter reactor chamber. A supply of fresh nutrient medium is provided by a piezo-electric silicon micro-pump. In the reactor, pH, temperature, and redox potential are monitored and the pH is regulated at a constant value. The complete instrument is fitted in a standard experiment container of 63 x 63 x 85 mm. The bioreactor was used on the IML-2 mission in July 1994 and is being refurbished for a reflight in the spring of 1996

MiOS, an integrated imaging and computational strategy to model gene folding with nucleosome resolution

The linear sequence of DNA provides invaluable information about genes and their regulatory elements along chromosomes. However, to fully understand gene function and regulation, we need to dissect how genes physically fold in the three-dimensional nuclear space. Here we describe immuno-OligoSTORM, an imaging strategy that reveals the distribution of nucleosomes within specific genes in super-resolution, through the simultaneous visualization of DNA and histones. We combine immuno-OligoSTORM with restraint-based and coarse-grained modeling approaches to integrate super-resolution imaging data with Hi-C contact frequencies and deconvoluted micrococcal nuclease-sequencing information. The resulting method, called Modeling immuno-OligoSTORM, allows quantitative modeling of genes with nucleosome resolution and provides information about chromatin accessibility for regulatory factors, such as RNA polymerase II. With Modeling immuno-OligoSTORM, we explore intercellular variability, transcriptional-dependent gene conformation, and folding of housekeeping and pluripotency-related genes in human pluripotent and differentiated cells, thereby obtaining the highest degree of data integration achieved so far to our knowledge

Evaluation der Berufseinstiegsbegleitung nach § 421s SGB III: Zwischenbericht 2011

Die Anforderungen an Schülerinnen und Schüler zwei Jahre vor ihrem Schulabschluss sind hoch. Schulisch sind sie mit vielen Prüfungen gefordert. Daneben müssen sie Bewerbungen für Ausbildungsplätze schreiben. Wenn es zum Bewerbungsgespräch kommt, stehen sie vor einer unbekannten Situation. Viele sind unsicher darüber, wie es nach der Schule weitergeht. Das Berufsleben - später meist selbstverständlich - ist die große Unbekannte. In dieser Phase hilft die Berufseinstiegsbegleitung nach dem Arbeitsförderungsrecht derzeit in einer modellhaften Erprobung an rund 1.000 Schulen denjenigen, die besondere Schwierigkeiten beim Schulabschluss und beim Übergang in die berufliche Zukunft haben. Bisher wurden dabei rund 37.000 Schülerinnen und Schülern durch die Bundesagentur für Arbeit gefördert. Die begleitende Wirkungsforschung (Evaluation) zeigt nun, dass sich bei den Teilnehmenden leichte Verbesserungen der Noten in Mathematik, Deutsch und Englisch zeigen. Von denjenigen, die die Schule „in Begleitung“ verlassen haben, haben 22,8 % eine betriebliche und 5,1 % eine schulische Berufsausbildung begonnen. Vergleichszahlen zu Übergängen von der Schule in den Beruf von jungen Menschen "ohne entsprechende Begleitung" liegen noch nicht vor. Nach der Schule verteilen sich die Schülerinnen und Schüler auf verschiedene Betriebe, Berufsschulen und andere Einrichtungen. Für die Tätigkeit der Berufseinstiegsbegleiterinnen und -begleiter stellt dies eine räumliche und eine organisatorische Herausforderung dar. Denn die Berufseinstiegsbegleitung endet in der Berufsausbildung normalerweise erst nach sechs Monaten. Damit soll die kritische Anfangsphase, in der die meisten Abbrüche stattfinden, stabilisiert werden. Die bisherigen positiven Erfahrungen mit der Berufseinstiegsbegleitung haben die Bundesregierung dazu veranlasst, im Entwurf eines Gesetzes zur Verbesserung der Eingliederungschancen am Arbeitsmarkt die Entfristung der Berufseinstiegsbegleitung vorzuschlagen. Der Deutsche Bundestag hat dieses Gesetz am 23. September 2011 verabschiedet

Expression of zebrafish pax6b in pancreas is regulated by two enhancers containing highly conserved cis-elements bound by PDX1, PBX and PREP factors

BACKGROUND: PAX6 is a transcription factor playing a crucial role in the development of the eye and in the differentiation of the pancreatic endocrine cells as well as of enteroendocrine cells. Studies on the mouse Pax6 gene have shown that sequences upstream from the P0 promoter are required for expression in the lens and the pancreas; but there remain discrepancies regarding the precise location of the pancreatic regulatory elements. RESULTS: Due to genome duplication in the evolution of ray-finned fishes, zebrafish has two pax6 genes, pax6a and pax6b. While both zebrafish pax6 genes are expressed in the developing eye and nervous system, only pax6b is expressed in the endocrine cells of the pancreas. To investigate the cause of this differential expression, we used a combination of in silico, in vivo and in vitro approaches. We show that the pax6b P0 promoter targets expression to endocrine pancreatic cells and also to enteroendocrine cells, retinal neurons and the telencephalon of transgenic zebrafish. Deletion analyses indicate that strong pancreatic expression of the pax6b gene relies on the combined action of two conserved regulatory enhancers, called regions A and C. By means of gel shift assays, we detected binding of the homeoproteins PDX1, PBX and PREP to several cis-elements of these regions. In constrast, regions A and C of the zebrafish pax6a gene are not active in the pancreas, this difference being attributable to sequence divergences within two cis-elements binding the pancreatic homeoprotein PDX1. CONCLUSION: Our data indicate a conserved role of enhancers A and C in the pancreatic expression of pax6b and emphasize the importance of the homeoproteins PBX and PREP cooperating with PDX1, in activating pax6b expression in endocrine pancreatic cells. This study also provides a striking example of how adaptative evolution of gene regulatory sequences upon gene duplication progressively leads to subfunctionalization of the paralogous gene pair

TRY plant trait database – enhanced coverage and open access

Plant traits - the morphological, anatomical, physiological, biochemical and phenological characteristics of plants - determine how plants respond to environmental factors, affect other trophic levels, and influence ecosystem properties and their benefits and detriments to people. Plant trait data thus represent the basis for a vast area of research spanning from evolutionary biology, community and functional ecology, to biodiversity conservation, ecosystem and landscape management, restoration, biogeography and earth system modelling. Since its foundation in 2007, the TRY database of plant traits has grown continuously. It now provides unprecedented data coverage under an open access data policy and is the main plant trait database used by the research community worldwide. Increasingly, the TRY database also supports new frontiers of trait‐based plant research, including the identification of data gaps and the subsequent mobilization or measurement of new data. To support this development, in this article we evaluate the extent of the trait data compiled in TRY and analyse emerging patterns of data coverage and representativeness. Best species coverage is achieved for categorical traits - almost complete coverage for ‘plant growth form’. However, most traits relevant for ecology and vegetation modelling are characterized by continuous intraspecific variation and trait–environmental relationships. These traits have to be measured on individual plants in their respective environment. Despite unprecedented data coverage, we observe a humbling lack of completeness and representativeness of these continuous traits in many aspects. We, therefore, conclude that reducing data gaps and biases in the TRY database remains a key challenge and requires a coordinated approach to data mobilization and trait measurements. This can only be achieved in collaboration with other initiatives