Speech Graphs Provide a Quantitative Measure of Thought Disorder in Psychosis

Background: Psychosis has various causes, including mania and schizophrenia. Since the differential diagnosis of psychosis is exclusively based on subjective assessments of oral interviews with patients, an objective quantification of the speech disturbances that characterize mania and schizophrenia is in order. In principle, such quantification could be achieved by the analysis of speech graphs. A graph represents a network with nodes connected by edges; in speech graphs, nodes correspond to words and edges correspond to semantic and grammatical relationships. Methodology/Principal Findings: To quantify speech differences related to psychosis, interviews with schizophrenics, manics and normal subjects were recorded and represented as graphs. Manics scored significantly higher than schizophrenics in ten graph measures. Psychopathological symptoms such as logorrhea, poor speech, and flight of thoughts were grasped by the analysis even when verbosity differences were discounted. Binary classifiers based on speech graph measures sorted schizophrenics from manics with up to 93.8% of sensitivity and 93.7% of specificity. In contrast, sorting based on the scores of two standard psychiatric scales (BPRS and PANSS) reached only 62.5% of sensitivity and specificity. Conclusions/Significance: The results demonstrate that alterations of the thought process manifested in the speech of psychotic patients can be objectively measured using graph-theoretical tools, developed to capture specific features of the normal and dysfunctional flow of thought, such as divergence and recurrence. The quantitative analysis of speech graphs is not redundant with standard psychometric scales but rather complementary, as it yields a very accurate sorting of schizophrenics and manics. Overall, the results point to automated psychiatric diagnosis based not on what is said, but on how it is said.FINEP [01.06.1092.00]FINEPCNPq Universal [481506/2007-1]CNPq UniversalCNPqCNPqCapesCAPESad Associacao Alberto Santos Dumont para Apoio a Pesquisa (AASDAP)a'd Associacao Alberto Santos Dumont para Apoio a Pesquisa (AASDAP

Complete genome sequence of community-associated methicillin-resistant Staphylococcus aureus (strain USA400-0051), a prototype of the USA400 clone

<div><p>Staphylococcus aureus subsp. aureus, commonly referred as S. aureus, is an important bacterial pathogen frequently involved in hospital- and community-acquired infections in humans, ranging from skin infections to more severe diseases such as pneumonia, bacteraemia, endocarditis, osteomyelitis, and disseminated infections. Here, we report the complete closed genome sequence of a community-acquired methicillin-resistant S. aureus strain, USA400-0051, which is a prototype of the USA400 clone.</p></div

Micoses superficiais na cidade de Manaus, AM, entre março e novembro/2003 Superficial mycoses in the City of Manaus/AM between March and November/2003

FUNDAMENTOS: Micoses superficiais estritas são infecções fúngicas que se localizam nas camadas superficiais da pele e seus anexos. As micoses superficiais cutâneas representadas pelas dermatofitoses e candidíases podem ultrapassar a camada córnea da pele. Na região amazônica possuem incidência elevada. OBJETIVOS: Estudar as micoses superficiais, estritas e cutâneas, diagnosticadas sob o ponto de vista epidemiológico e micológico. PACIENTES E MÉTODOS: Pacientes com suspeita clínica de micoses superficiais submetidos a exame micológico no período de março a novembro de 2003 no Laboratório de Micologia Médica/CPCS/INPA. RESULTADOS: Foram realizados 394 exames, tendo 256 apresentado diagnóstico positivo. As micoses mais incidentes foram onicomicoses (135) e pitiríase versicolor (98). Malassezia spp. (77) e Candida spp. (72) foram os agentes fúngicos mais isolados. Tinea capitis apresentou maior ocorrência nos pré-escolares (3), e onicomicoses em adultos (94). O sexo feminino foi o mais acometido (91). Todas as classes sociais foram infectadas, com predominância da C (37). CONCLUSÃO: Onicomicoses e pitiríase versicolor acometeram sobretudo adultos. A Tinea capitis ocorre principalmente, em crianças. As micoses superficiais apresentaram mais incidentes nas mulheres. Malassezia spp. e Candida spp. foram os agentes mais isolados.<br>BACKGROUND - Restricted superficial mycoses are fungal infections that appear on the skin superficial layers and their adnexa. However skin superficial mycoses represented by dermatophytoses and candidiasis can invade the corneal layer. This type of mycosis has a high incidence in the Amazon region. OBJECTIVES - To study the restricted superficial mycoses under the epidemiological and mycological point of view. PATIENTS AND METHODS - Patients presenting clinical suspicion of superficial mycoses submitted to mycological examination from March to November 2003 at the Clinical Mycology Laboratory/CPCS-INPA. RESULTS - Three hundred and ninety-four examinations were carried out throughout the period and 256 were positive. The mycoses with higher incidence were onychomycosis (135) and pityriasis versicolor (98). The most often isolated agents were Malassezia spp. (77) and Candida spp. (72). Tinea capitis was more frequent in pre-school children (3) and onychomycosis in adults (94). Mycoses were more prevalent in women (91). All socioeconomic classes were affected, with a predominance in class C (37). CONCLUSION - Onychomycosis and pityriasis versicolor affected mostly adults and Tinea capitis occured mainly in children. Superficial mycoses were more predominant in women. Malassezia spp. and Candida spp. were the most often isolated agents

Chromosomal diversity in Philodendron (Araceae): taxonomic significance and a critical review

The genus Philodendron is a highly diverse Neotropical group of the monocot family Araceae. Despite chromosome counts being relatively abundant for the family, information on the karyotype evolution within the genus is still scarce and very confusing. Therefore, we report diploid numbers and additional cytological features for 43 species of Philodendron, discussing the importance of our results and reviewing previous data. Species were collected in four different Brazilian biomes (Caatinga, Cerrado, Amazon basin and Atlantic Forest) and chromosome counts were based on Giemsa standard staining procedures. First chromosome counts are given for 35 species, while for another eight species counts are reported for new provenances. The majority of the species (27) presented the diploid number of 2n = 32, while the number 2n = 34, the second most frequent, was observed in eight taxa. Uncommon chromosome numbers were observed for seven species: P. callosum and P. uliginosum with 2n = 28, P. hastatum and P. melinonii with 2n = 30, P. corcovadense and P. saxicola with 2n = 36 and P. brevispathum with 2n = 40. On the other hand, two species showed variation in chromosome numbers among analysed cells: P. insigne with 2n = 30-32 and P. pulchrum with 2n = 26-28. Regarding chromosome morphologies, a prevalence of submetacentric and metacentric pairs could be observed in most species, with some taxa having a tendency to asymmetry and a higher number of acrocentric pairs. A list of all available chromosomal data is presented, considering the actual taxonomic circumscription and synonyms. Considering the present analysis and the literature data, we suggest n = 16 instead of n = 18 as the primary basic number of the genus, from which secondary base numbers n = 17, 18 and (less frequently) 15, 14 and 13 have probably been derived. Dysploidy seems to be the prevalent karyoevolutionary trend within the genus. © 2013 Springer-Verlag Wien

Orientierungsschätzung mit einem Sliding Mode-Beobachter auf Basis Body Sensor Network-integrierter Inertialsensorik

Background: The fungal genus Sporothrix includes at least four human pathogenic species. One of these species, S. brasiliensis, is the causal agent of a major ongoing zoonotic outbreak of sporotrichosis in Brazil. Elsewhere, sapronoses are caused by S. schenckii and S. globosa. The major aims on this comparative genomic study are: 1) to explore the presence of virulence factors in S. schenckii and S. brasiliensis; 2) to compare S. brasiliensis, which is cat-transmitted and infects both humans and cats with S. schenckii, mainly a human pathogen; 3) to compare these two species to other human pathogens (Onygenales) with similar thermo-dimorphic behavior and to other plant-associated Sordariomycetes. Results: The genomes of S. schenckii and S. brasiliensis were pyrosequenced to 17x and 20x coverage comprising a total of 32.3 Mb and 33.2 Mb, respectively. Pair-wise genome alignments revealed that the two species are highly syntenic showing 97.5% average sequence identity. Phylogenomic analysis reveals that both species diverged about 3.8-4.9 MYA suggesting a recent event of speciation. Transposable elements comprise respectively 0.34% and 0.62% of the S. schenckii andS. brasiliensis genomes and expansions of Gypsy-like elements was observed reflecting the accumulation of repetitive elements in the S. brasiliensis genome. Mitochondrial genomic comparisons showed the presence of group-I intron encoding homing endonucleases (HE’s) exclusively in S. brasiliensis. Analysis of protein family expansions and contractions in theSporothrix lineage revealed expansion of LysM domain-containing proteins, small GTPases, PKS type1 and leucin-rich proteins. In contrast, a lack of polysaccharide lyase genes that are associated with decay of plants was observed when compared to other Sordariomycetes and dimorphic fungal pathogens, suggesting evolutionary adaptations from a plant pathogenic or saprobic to an animal pathogenic life style. Conclusions: Comparative genomic data suggest a unique ecological shift in the Sporothrix lineage from plant-association to mammalian parasitism, which contributes to the understanding of how environmental interactions may shape fungal virulence. . Moreover, the striking differences found in comparison with other dimorphic fungi revealed that dimorphism in these close relatives of plant-associated Sordariomycetes is a case of convergent evolution, stressing the importance of this morphogenetic change in fungal pathogenesis