Grain Sorting Effects on Geochemical Characteristics of Sulfide Mine Tailings: a Case Study

The geochemical evolution of a sulfide mine tailings impoundment in SW Spain was studied. The impoundment was selected because of its small size and its tailings deposition system with a simple discharge point. The objective of this study was to test the hypothesis that mineral segregation associated to hydraulic sorting has significant effects on the geochemical characteristics and the long term weathering. Tailings samples were collected along depth profiles in three sampling points (proximal, central and distal to the point of discharge), and characterized by color, grain size, pH, acid-base account and chemical elements concentration, with the help of routine XRD analysis. Three vertical zones were identified: an upper oxidized zone, a transition intermediate zone, and an unoxidized zone. The analytical results indicate a segregation pattern in the unoxidized tailings based on differences in size and density of tailings grains. Near the discharge point, tailings were coarser and rich in pyrite, whereas the proportion of silicates increased from proximal to distal points. This results in a clear zoning which has consequences on geochemical and mineralogical evolution under weathering, showing substantial differences in the depth of the oxidation front, the acid generation and neutralization capacity, the formation of Fe secondary phases (jarosite) and the total content of the sulfide-related elements (Fe, As, Zn, Cu, Pb and Cd). The results of the study can serve to improve the theoretical bases for the development of conceptual models for predicting environmental impacts associated with sulfide tailings impoundments. Recently, the impoundment has been covered with a soil cover. This fact offers the possibility of new research on its evolution under new conditions

MARES, a replicable pipeline and curated reference database for marine eukaryote metabarcoding

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The Poincare-Birkhoff theorem in Quantum Mechanics

Quantum manifestations of the dynamics around resonant tori in perturbed Hamiltonian systems, dictated by the Poincar\'e--Birkhoff theorem, are shown to exist. They are embedded in the interactions involving states which differ in a number of quanta equal to the order of the classical resonance. Moreover, the associated classical phase space structures are mimicked in the quasiprobability density functions and their zeros.Comment: 5 pages, 3 figures, Full resolution figures available at http://www.df.uba.ar/users/wisniaki/publications.htm

Earth Occultation Imaging of the Low Energy Gamma-Ray Sky with GBM

The Earth Occultation Technique (EOT) has been applied to Fermi's Gamma-ray Burst Monitor (GBM) to perform all-sky monitoring for a predetermined catalog of hard X-ray/soft gamma-ray sources. In order to search for sources not in the catalog, thus completing the catalog and reducing a source of systematic error in EOT, an imaging method has been developed -- Imaging with a Differential filter using the Earth Occultation Method (IDEOM). IDEOM is a tomographic imaging method that takes advantage of the orbital precession of the Fermi satellite. Using IDEOM, all-sky reconstructions have been generated for ~sim 4 years of GBM data in the 12-50 keV, 50-100 keV and 100-300 keV energy bands in search of sources otherwise unmodeled by the GBM occultation analysis. IDEOM analysis resulted in the detection of 57 sources in the 12-50 keV energy band, 23 sources in the 50-100 keV energy band, and 7 sources in the 100-300 keV energy band. Seventeen sources were not present in the original GBM-EOT catalog and have now been added. We also present the first joined averaged spectra for four persistent sources detected by GBM using EOT and by the Large Area Telescope (LAT) on Fermi: NGC 1275, 3C 273, Cen A, and the Crab

Long-term pulse profile study of the Be/X-ray pulsar SAX J2103.5+4545

Aims. We present the first long-term pulse profile study of the X-ray pulsar SAX J2103.5+4545. Our main goal is to study the pulse shape correlation either with luminosity, time or energy. Methods. This Be/X-ray binary system was observed from 1999 to 2004 by RXTE PCA, and by INTEGRAL from 2002 to 2005, during the Performance and Verification (PV) phase and the Galactic Plane Scan survey (GPS). X-ray pulse profiles were obtained in different energy ranges. The long-term spectral variability of this source is studied. The long-term flux, frequency and spin-up rate histories are computed. A new set of orbital parameters are also determined. Results. The pulse shape is complex and highly variable either with time or luminosity. However, an energy dependence pattern was found. Single, double, triple or even quadruple peaks pulse profile structure was obtained. It was confirmed that SAX J2103.5+4545 becomes harder when the flux is higher. The new orbital solution obtained is: P_orb= 12.66528+-0.00051 days, e = 0.401+-0.018, w = 241.36+-2.18 and a_xsin i = 80.81+-0.67 lt-s.Comment: 9 pages, 11 figures, submitted to Astronomy & Astrophysic

Crowdsourcing malaria parasite quantification: an online game for analyzing images of infected thick blood smears

Background: There are 600,000 new malaria cases daily worldwide. The gold standard for estimating the parasite burden and the corresponding severity of the disease consists in manually counting the number of parasites in blood smears through a microscope, a process that can take more than 20 minutes of an expert microscopist’s time. Objective: This research tests the feasibility of a crowdsourced approach to malaria image analysis. In particular, we investigated whether anonymous volunteers with no prior experience would be able to count malaria parasites in digitized images of thick blood smears by playing a Web-based game. Methods: The experimental system consisted of a Web-based game where online volunteers were tasked with detecting parasites in digitized blood sample images coupled with a decision algorithm that combined the analyses from several players to produce an improved collective detection outcome. Data were collected through the MalariaSpot website. Random images of thick blood films containing Plasmodium falciparum at medium to low parasitemias, acquired by conventional optical microscopy, were presented to players. In the game, players had to find and tag as many parasites as possible in 1 minute. In the event that players found all the parasites present in the image, they were presented with a new image. In order to combine the choices of different players into a single crowd decision, we implemented an image processing pipeline and a quorum algorithm that judged a parasite tagged when a group of players agreed on its position. Results: Over 1 month, anonymous players from 95 countries played more than 12,000 games and generated a database of more than 270,000 clicks on the test images. Results revealed that combining 22 games from nonexpert players achieved a parasite counting accuracy higher than 99%. This performance could be obtained also by combining 13 games from players trained for 1 minute. Exhaustive computations measured the parasite counting accuracy for all players as a function of the number of games considered and the experience of the players. In addition, we propose a mathematical equation that accurately models the collective parasite counting performance. Conclusions: This research validates the online gaming approach for crowdsourced counting of malaria parasites in images of thick blood films. The findings support the conclusion that nonexperts are able to rapidly learn how to identify the typical features of malaria parasites in digitized thick blood samples and that combining the analyses of several users provides similar parasite counting accuracy rates as those of expert microscopists. This experiment illustrates the potential of the crowdsourced gaming approach for performing routine malaria parasite quantification, and more generally for solving biomedical image analysis problems, with future potential for telediagnosis related to global health challenges

First DNA barcode reference library for the identification of South American freshwater fish from the lower Paraná river

Valid fish species identification is essential for biodiversity conservation and fisheries management. Here, we provide a sequence reference library based on mitochondrial cytochrome c oxidase subunit I for a valid identification of 79 freshwater fish species from the Lower Paraná River. Neighbour-joining analysis based on K2P genetic distances formed non-overlapping clusters for almost all species with a ≥99% bootstrap support each. Identification was successful for 97.8% of species as the minimum genetic distance to the nearest neighbour exceeded the maximum intraspecific distance in all these cases. A barcoding gap of 2.5% was apparent for the whole data set with the exception of four cases. Withinspecies distances ranged from 0.00% to 7.59%, while interspecific distances varied between 4.06% and 19.98%, without considering Odontesthes species with a minimum genetic distance of 0%. Sequence library validation was performed by applying BOLDs BIN analysis tool, Poisson Tree Processes model and Automatic Barcode Gap Discovery, along with a reliable taxonomic assignment by experts. Exhaustive revision of vouchers was performed when a conflicting assignment was detected after sequence analysis and BIN discordance evaluation. Thus, the sequence library presented here can be confidently used as a benchmark for identification of half of the fish species recorded for the Lower Paraná River.Instituto de Limnología "Dr. Raul A. Ringuelet

End-to-End Evaluation in Simultaneous Translation

This paper presents the end-to-end evaluation of an automatic simultaneous translation system, built with state-of-the-art components. It shows whether, and for which situations, such a system might be advantageous when compared to a human interpreter. Using speeches in English translated into Spanish, we resent the evaluation procedure and we discuss the results both for the recognition and translation components as well as for the overall system. Even if the translation process remains the Achilles’ heel of the system, the results show that the system can keep at least half of the information, becoming potentially useful for final users

A 0535+26: an X-ray/Optical Tour

We compiled X-ray and Optical observations of the accreting X-ray binary system A 0535+262 since its discovery in 1975, that will allow us to shed light on the unpredictable behavior of this binary system. We present the data in terms of the Be-disk interaction with the neutron star companion. In addition, we show recent results from the continuous monitoring of this source by the Gamma-ray Burst Monitor(GBM), on board the Fermi observatory, since its launch in 2008 June 11.Comment: 4 pages, 5 figures, Conference proceeding of "Astrophysics of Neutron Stars 2010 - a conference in honor of M. Ali Alpar", 2-6 August 2010, Cesme, Izmir, Turke