The D-Grid Integration Project: How to Build a Grid for Different Communities

The Grid world is highly dynamic due to the appearance of new resources, easier access and new Grid applications. Moreover, an increasing number of scientific communities begins to realize that Grids will become an indispensable tool for modern science. However, the requirements of those communities often differ significantly from each other. Therefore, it is a particularly di±cult challenge to establish a national Grid infrastructure that serves as many communities as possible. To address this challenge, the German D-Grid has developed a concept that is based on development of independent Community Grids that are connected with a single integration project. Further, the process will involve several steps to consider dependencies between the various projects and their tasks. Presently, we are still at the beginning of the realization of a German Grid. Therefore in this paper, we first briefly explain this concept in this paper. Then we focus on the integration project and describe its tasks in more detail. This includes some first results and experiences that were achieved within the first year of the project. Finally, some plans for future steps are presented

Discerning primary versus diagenetic signals in carbonate carbon and oxygen isotope records: An example from the Permian-Triassic boundary of Iran

This is the author accepted manuscript. The final version is available from Elsevier via the DOI in this recordSedimentary successions across the Permian-Triassic boundary (PTB) are marked by a prominent negative carbon isotope excursion. This excursion, found in both fossil (e.g., brachiopod) and bulk carbonate at many sites around the world, is generally considered to be related to a global carbon cycle perturbation. Oxygen isotopes also show a negative excursion across the PTB, but because δ18O is more prone to diagenetic overprint (especially in bulk carbonate), these data are often not used in palaeoenvironmental analyses. In the present study, bulk-rock and brachiopod δ13C and δ18O, as well as conodont δ18O, were analyzed in PTB successions at Kuh-e-Ali Bashi and Zal (NW Iran) in order to evaluate diagenetic overprints on primary marine isotopic signals. The results show that the use of paired C-O isotopes and Mn-Sr concentrations is not sufficient to identify diagenetic alteration in bulk materials, because δ13C-δ18O covariation can be due to environmental factors rather than diagenesis, and Sr/Ca and Mn/Ca ratios can vary as a function of bulk-rock lithology. Comparison of δ13C profiles shows that all bulk carbonate is altered to some degree, although the general bulk-rock trend mimics that of the brachiopod data with a systematic offset of -1.2(±0.4)‰. This suggests that the first-order δ13C trend in bulk carbonate is generally robust but that the significance of small-scale carbon isotope fluctuations is uncertain, especially when such fluctuations are linked to lithologic variation. The PTB interval, which is marked by a low-carbonate 'Boundary Clay' in the study sections, may be especially prone to diagenetic alteration, e.g., via late-stage dolomitization. Comparison of oxygen-isotope profiles for bulk rock and well-preserved fossils (both brachiopods and conodonts) shows that the former are offset by -2.1(±0.4)‰. Diagenetic modeling suggests that these offsets were the product mainly of early diagenesis at burial temperatures of ~50-80°C and water/rock ratios of <10. Authigenic carbonates precipitated during early diagenesis represent a potentially major sink for isotopically light carbon at a global scale that has received relatively little attention to date.TJA thanks the Sedimentary Geology and Paleobiology program of the U.S. National Science Foundation (NSF EAR-1053449), the NASA Exobiology program (NNX13AJ1IG), and the China University of Geosciences—Wuhan (SKL-GPMR program GPMR201301, and SKL-BGEG programBGL21407) for their support. This study was funded by Deutsche Forschungsgemeinschaft (DFG; projects KO1829/12-1, KO1829/12-2 and KO2011/8-1)

SHAPING OF ION PULSES FROM AN ELECTRON BEAM ION SOURCE FOR PARTICLE INJECTION INTO ACCELERATORS*

Abstract Electron Beam Ion Sources (EBISs) provide highly charged ions (HCIs) for many applications, amongst others for particle injection into accelerators. Although EBISs are limited in ion output they feature a lot of advantages which qualify them for accelerator injection. The ion pulses extracted from the ion sources can be directly injected into an accelerator sequence which however requires ion pulses with distinct shape and length. The ions are produced by trapping in a high density electron beam for a certain time with electrostatic potentials providing for their axial trapping. Due to the ion energy distribution within the trapping region ion extraction can be controlled by controlling the trapping potential. A specific time dependent control mode of the trapping potential thus allow for the production of ion pulses with designated shape and length. Source parameters such as working gas pressure, electron beam current and energy influence the energy distribution of the ions which in turn influence the pulse shaping

Electron Loss from 1.4-MeV / u U\u3csup\u3e4,6,10+\u3c/sup\u3e Ions Colliding with Ne, N₂, and Ar Targets

Absolute, total, single- and multiple-electron-loss cross sections are measured for 1.4-MeV / u U4,6,10+ ions colliding with neon and argon atoms and nitrogen molecules. It is found that the cross sections all have the same dependence on the number of electrons lost and that multiplying the cross sections by the initial number of electrons in the 6s, 6p, and 5f shells yields good agreement between the different projectiles. By combining the present data with previous measurements made at the same velocity, it is shown that the scaled cross sections slowly decrease in magnitude for incoming charge states between 1 and 10, whereas the cross sections for higher-charge-state ions fall off much more rapidly

Anaerobic Microbial Degradation of Hydrocarbons: From Enzymatic Reactions to the Environment

Hydrocarbons are abundant in anoxic environments and pose biochemical challenges to their anaerobic degradation by microorganisms. Within the framework of the Priority Program 1319, investigations funded by the Deutsche Forschungsgemeinschaft on the anaerobic microbial degradation of hydrocarbons ranged from isolation and enrichment of hitherto unknown hydrocarbon-degrading anaerobic microorganisms, discovery of novel reactions, detailed studies of enzyme mechanisms and structures to process-oriented in situ studies. Selected highlights from this program are collected in this synopsis, with more detailed information provided by theme-focused reviews of the special topic issue on 'Anaerobic biodegradation of hydrocarbons' [this issue, pp. 1-244]. The interdisciplinary character of the program, involving microbiologists, biochemists, organic chemists and environmental scientists, is best exemplified by the studies on alkyl-/arylalkylsuccinate synthases. Here, research topics ranged from in-depth mechanistic studies of archetypical toluene-activating benzylsuccinate synthase, substrate-specific phylogenetic clustering of alkyl-/arylalkylsuccinate synthases (toluene plus xylenes, p-cymene, p-cresol, 2-methylnaphthalene, n-alkanes), stereochemical and co-metabolic insights into n-alkane-activating (methylalkyl) succinate synthases to the discovery of bacterial groups previously unknown to possess alkyl-/arylalkylsuccinate synthases by means of functional gene markers and in situ field studies enabled by state-of-the-art stable isotope probing and fractionation approaches. Other topics are Mo-cofactor-dependent dehydrogenases performing O-2-independent hydroxylation of hydrocarbons and alkyl side chains (ethylbenzene, p-cymene, cholesterol, n-hexadecane), degradation of p-alkylated benzoates and toluenes, glycyl radical-bearing 4-hydroxyphenylacetate decarboxylase, novel types of carboxylation reactions (for acetophenone, acetone, and potentially also benzene and naphthalene), W-cofactor-containing enzymes for reductive dearomatization of benzoyl-CoA (class II benzoyl-CoA reductase) in obligate anaerobes and addition of water to acetylene, fermentative formation of cyclohexanecarboxylate from benzoate, and methanogenic degradation of hydrocarbons

Association Analysis of Canonical Wnt Signalling Genes in Diabetic Nephropathy

Several studies have provided compelling evidence implicating the Wnt signalling pathway in the pathogenesis of diabetic nephropathy. Gene expression profiles associated with renal fibrosis have been attenuated through Wnt pathway modulation in model systems implicating Wnt pathway members as potential therapeutic targets for the treatment of diabetic nephropathy. We assessed tag and potentially functional single nucleotide polymorphisms (SNPs; n = 31) in four key Wnt pathway genes (CTNNB1, AXIN2, LRP5 and LRP6) for association with diabetic nephropathy using a case-control design.SNPs were genotyped using Sequenom or Taqman technologies in 1351 individuals with type 1 diabetes (651 cases with nephropathy and 700 controls without nephropathy). Cases and controls were white and recruited from the UK and Ireland. Association analyses were performed using PLINK, to compare allele and haplotype frequencies in cases and controls. Adjustment for multiple testing was performed by permutation testing.Following logistic regression analysis adjusted by collection centre, duration of T1D, and average HbA1c as covariates, a single SNP in LRP6 (rs1337791) was significantly associated with DN (OR = 0.74; CI: 0.57-0.97; P = 0.028), although this was not maintained following correction for multiple testing. Three additional SNPs (rs2075241 in LRP6; rs3736228 and rs491347 both in LRP5) were marginally associated with diabetic nephropathy, but none of the associations were replicated in an independent dataset. Haplotype and subgroup analysis (according to duration of diabetes, and end-stage renal disease) also failed to reveal an association with diabetic nephropathy.Our results suggest that analysed common variants in CTNNB1, AXIN2, LRP5 and LRP6 are not strongly associated with diabetic nephropathy in type 1 diabetes among white individuals. Our findings, however, cannot entirely exclude these genes or other members of the Wnt pathway, from involvement in the pathogenesis of diabetic nephropathy as our study had limited power to detect variants with small effect size

Plastisol Foaming Process. Decomposition of the Foaming Agent, Polymer Behavior in the Corresponding Temperature Range and Resulting Foam Properties

The decomposition of azodicarbonamide, used as foaming agent in PVC - plasticizer (1/1) plastisols was studied by DSC. Nineteen different plasticizers, all belonging to the ester family, two being polymeric (polyadipates), were compared. The temperature of maximum decomposition rate (in anisothermal regime at 5 K min-1 scanning rate), ranges between 434 and 452 K. The heat of decomposition ranges between 8.7 and 12.5 J g -1. Some trends of variation of these parameters appear significant and are discussed in terms of solvent (matrix) and viscosity effects on the decomposition reactions. The shear modulus at 1 Hz frequency was determined at the temperature of maximum rate of foaming agent decomposition, and differs significantly from a sample to another. The foam density was determined at ambient temperature and the volume fraction of bubbles was used as criterion to judge the efficiency of the foaming process. The results reveal the existence of an optimal shear modulus of the order of 2 kPa that corresponds roughly to plasticizer molar masses of the order of 450 ± 50 g mol-1. Heavier plasticizers, especially polymeric ones are too difficult to deform. Lighter plasticizers such as diethyl phthalate (DEP) deform too easily and presumably facilitate bubble collapse

Observation of Scaling Violations in Scaled Momentum Distributions at HERA

Charged particle production has been measured in deep inelastic scattering (DIS) events over a large range of $x$ and $Q^2$ using the ZEUS detector. The evolution of the scaled momentum, $x_p$, with $Q^2,$ in the range 10 to 1280 $GeV^2$, has been investigated in the current fragmentation region of the Breit frame. The results show clear evidence, in a single experiment, for scaling violations in scaled momenta as a function of $Q^2$.Comment: 21 pages including 4 figures, to be published in Physics Letters B. Two references adde