74 research outputs found

    EC00-153 Selecting Alfalfa Varieties for Nebraska

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    Yield potential, pest resistance and seed price should be considered when selecting alfalfa varieties in Nebraska. The most important variety decision on many farms and ranches is the selection of alfalfa. The choice of alfalfa variety affects production for three to 10 or more years, whereas varieties of annual crops can be change every year. This extension circular lists the alfalfa varieties that have been tested in Nebraska with commercial seed for two or more years since 1997 and marketed in the state. These are the 2000 results

    Tracing Internet Path Transparency

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    This project has received funding from the European Union’s Horizon 2020 research and innovation program under grant agreement No 688421, and was supported by the Swiss State Secretariat for Education, Research and Innovation (SERI) under contract number 15.0268. The opinions expressed and arguments employed reflect only the authors’ views. The European Commission is not responsible for any use that may be made of that information. Further, the opinions expressed and arguments employed herein do not necessarily reflect the official views of the Swiss Government.Peer reviewedPublisher PD

    G77-357 Selecting Alfalfa Varieties for Nebraska (Revised December 1994)

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    The most important variety decision made on many farms and ranches is the selection of alfalfa varieties. The choice of alfalfa variety affects production for three to 10 or more years. Yield potential, pest resistance and seed price all should be considered in selecting alfalfa varieties in Nebraska. This NebGuide discusses them

    Endophyte Status in Summer-Dormant Tall Fescue in the Southern Great Plains of USA

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    Non-toxic fungal endophytes provide persistence-related benefits to summer-active, continental-type tall fescue (Festuca arundinacea Schreb.), as well as reduced animal toxicosis compared to toxic endophytes. However, the benefits of fungal endophytes to summer-dormant, Mediterranean-type tall fescue persistence or production are unclear. Summer-dormant tall fescue has potential to replace traditional, annual small grain graze-out systems in the Southern Great Plains region of the USA. This region is characterized by severe water deficits accompanied by extreme heat in summer, and by relatively mild, rainy winters (Malinowski et al. 2009). Summer-active tall fescues are better suited to high rainfall areas (\u3e 900 mm annual average rainfall (AAR)) east of the 97° longitudinal meridian, while summer-dormant tall fescues are best adapted to lower rainfall areas (600 to 900 mm AAR) between the 97° and 99° longitudinal meridian (Butler et al. 2011). The objective of this field study was to determine the effects of the ‘novel’ endophyte strain AR542 on persistence of summer-dormant tall fescue ‘Flecha’ in the Southern Great Plains of the USA. Two field experiments were conducted to evaluate the effect of the novel endophyte AR542 on the survival of Flecha

    Electrochemical and ligand binding studies of a de novo heme protein

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    Abstract Heme proteins can perform a variety of electrochemical functions. While natural heme proteins carry out particular functions selected by biological evolution, artificial heme proteins, in principle, can be tailored to suit specified technological applications. Here we describe initial characterization of the electrochemical properties of a de novo heme protein, S824C. Protein S824C is a four-helix bundle derived from a library of sequences that was designed by binary patterning of polar and nonpolar amino acids. Protein S824C was immobilized on a gold electrode and the formal potential of heme-protein complex was studied as a function of pH and ionic strength. The binding of exogenous N-donor ligands to heme/S824C was monitored by measuring shifts in the potential that occurred upon addition of various concentrations of imidazole or pyridine derivatives. The response of heme/S824C to these ligands was then compared to the response of isolated heme (without protein) to the same ligands. The observed shifts in potential depended on both the concentration and the structure of the added ligand. Small changes in structure of the ligand (e.g. pyridine versus 2-amino pyridine) produced significant shifts in the potential of the heme-protein. The observed shifts correlate to the differential binding of the N-donor molecules to the oxidized and reduced states of the heme. Further, it was observed that the electrochemical response of the buried heme in heme/S824C differed significantly from that of isolated heme. These studies demonstrate that the structure of the de novo protein modulates the binding of N-donor ligands to heme

    Alcohol-Induced Suppression of KDM6B Dysregulates the Mineralization Potential in Dental Pulp Stem Cells

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    Epigenetic changes, such as alteration of DNA methylation patterns, have been proposed as a molecular mechanism underlying the effect of alcohol on the maintenance of adult stem cells. We have performed genome-wide gene expression microarray and DNA methylome analysis to identify molecular alterations via DNA methylation changes associated with exposure of human dental pulp stem cells (DPSCs) to ethanol (EtOH). By combined analysis of the gene expression and DNA methylation, we have found a significant number of genes that are potentially regulated by EtOH-induced DNA methylation. As a focused approach, we have also performed a pathway-focused RT-PCR array analysis to examine potential molecular effects of EtOH on genes involved in epigenetic chromatin modification enzymes, fibroblastic markers, and stress and toxicity pathways in DPSCs. We have identified and verified that lysine specific demethylase 6B (KDM6B) was significantly dysregulated in DPSCs upon EtOH exposure. EtOH treatment during odontogenic/osteogenic differentiation of DPSCs suppressed the induction of KDM6B with alterations in the expression of differentiation markers. Knockdown of KDM6B resulted in a marked decrease in mineralization from implanted DPSCs in vivo. Furthermore, an ectopic expression of KDM6B in EtOH-treated DPSCs restored the expression of differentiation-related genes. Our study has demonstrated that EtOH-induced inhibition of KDM6B plays a role in the dysregulation of odontogenic/osteogenic differentiation in the DPSC model. This suggests a potential molecular mechanism for cellular insults of heavy alcohol consumption that can lead to decreased mineral deposition potentially associated with abnormalities in dental development and also osteopenia/osteoporosis, hallmark features of fetal alcohol spectrum disorders

    Coronavirus infection and PARP expression dysregulate the NAD metabolome: An actionable component of innate immunity

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    Poly(ADP-ribose) polymerase (PARP) superfamily members covalently link either a single ADP-ribose (ADPR) or a chain of ADPR units to proteins using NAD as the source of ADPR. Although the well-known poly(ADP-ribosylating) (PARylating) PARPs primarily function in the DNA damage response, many noncanonical mono(ADP-ribosylating) (MARylating) PARPs are associated with cellular antiviral responses. We recently demonstrated robust up-regulation of several PARPs following infection with murine hepatitis virus (MHV), a model coronavirus. Here we show that SARS-CoV-2 infection strikingly up-regulates MARylating PARPs and induces the expression of genes encoding enzymes for salvage NAD synthesis from nicotinamide (NAM) and nicotinamide riboside (NR), while down-regulating other NAD biosynthetic pathways. We show that overexpression of PARP10 is sufficient to depress cellular NAD and that the activities of the transcriptionally induced enzymes PARP7, PARP10, PARP12 and PARP14 are limited by cellular NAD and can be enhanced by pharmacological activation of NAD synthesis. We further demonstrate that infection with MHV induces a severe attack on host cell NAD+ and NADP+. Finally, we show that NAMPT activation, NAM, and NR dramatically decrease the replication of an MHV that is sensitive to PARP activity. These data suggest that the antiviral activities of noncanonical PARP isozyme activities are limited by the availability of NAD and that nutritional and pharmacological interventions to enhance NAD levels may boost innate immunity to coronaviruses

    Vortices in Saturn's Northern Hemisphere (2008-2015) observed by Cassini ISS

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    We use observations from the Imaging Science Subsystem on Cassini to create maps of Saturn's Northern Hemisphere (NH) from 2008 to 2015, a time period including a seasonal transition (i.e., spring equinox in 2009) and the 2010 giant storm. The processed maps are used to investigate vortices in the NH during the period of 2008–2015. All recorded vortices have diameters (east‐west) smaller than 6000 km except for the largest vortex that developed from the 2010 giant storm. The largest vortex decreased its diameter from ~11,000 km in 2011 to ~5000 km in 2015, and its average diameter is ~6500 km during the period of 2011–2015. The largest vortex lasts at least 4 years, which is much longer than the lifetimes of most vortices (less than 1 year). The largest vortex drifts to north, which can be explained by the beta drift effect. The number of vortices displays varying behaviors in the meridional direction, in which the 2010 giant storm significantly affects the generation and development of vortices in the middle latitudes (25–45°N). In the higher latitudes (45–90°N), the number of vortices also displays strong temporal variations. The solar flux and the internal heat do not directly contribute to the vortex activities, leaving the temporal variations of vortices in the higher latitudes (45–90°N) unexplained

    On the mechanism of ubiquinone mediated photocurrent generation by a reaction center based photocathode

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    Upon photoexcitation, the reaction center (RC) pigment-proteins that facilitate natural photosynthesis achieve a metastable separation of electrical charge among the embedded cofactors. Because of the high quantum efficiency of this process, there is a growing interest in their incorporation into biohybrid materials for solar energy conversion, bioelectronics and biosensing. Multiple bioelectrochemical studies have shown that reaction centers from various photosynthetic organisms can be interfaced with diverse electrode materials for the generation of photocurrents, but many mechanistic aspects of native protein functionality in a non-native environment is unknown. In vivo, RC's catalyse ubiquinone-10 reduction, protonation and exchange with other lipid phase ubiquinone-10s via protein-controlled spatial orientation and protein rearrangement. In contrast, the mechanism of ubiquinone-0 reduction, used to facilitate fast RC turnover in an aqueous photoelectrochemical cell (PEC), may not proceed via the same pathway as the native cofactor. In this report we show truncation of the native isoprene tail results in larger RC turnover rates in a PEC despite the removal of the tail's purported role of ubiquinone headgroup orientation and binding. Through the use of reaction centers with single or double mutations, we also show the extent to which two-electron/two-proton ubiquinone chemistry that operates in vivo also underpins the ubiquinone-0 reduction by surface-adsorbed RCs in a PEC. This reveals that only the ubiquinone headgroup is critical to the fast turnover of the RC in a PEC and provides insight into design principles for the development of new biophotovoltaic cells and biosensors

    Vortices in Saturn's Northern Hemisphere (2008-2015) observed by Cassini ISS

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    We use observations from the Imaging Science Subsystem on Cassini to create maps of Saturn's Northern Hemisphere (NH) from 2008 to 2015, a time period including a seasonal transition (i.e., spring equinox in 2009) and the 2010 giant storm. The processed maps are used to investigate vortices in the NH during the period of 2008–2015. All recorded vortices have diameters (east‐west) smaller than 6000 km except for the largest vortex that developed from the 2010 giant storm. The largest vortex decreased its diameter from ~11,000 km in 2011 to ~5000 km in 2015, and its average diameter is ~6500 km during the period of 2011–2015. The largest vortex lasts at least 4 years, which is much longer than the lifetimes of most vortices (less than 1 year). The largest vortex drifts to north, which can be explained by the beta drift effect. The number of vortices displays varying behaviors in the meridional direction, in which the 2010 giant storm significantly affects the generation and development of vortices in the middle latitudes (25–45°N). In the higher latitudes (45–90°N), the number of vortices also displays strong temporal variations. The solar flux and the internal heat do not directly contribute to the vortex activities, leaving the temporal variations of vortices in the higher latitudes (45–90°N) unexplained
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