1,127 research outputs found

    Stable isotope relationships between apatite phosphate (Ī“18O), structural carbonate (Ī“18O, Ī“13C), and collagen (Ī“2H, Ī“13C, Ī“15N, Ī“34S) in modern human dentine

    Get PDF
    Rationale The use of multiā€isotopic analysis (Ī“2H, Ī“13C, Ī“15N, Ī“18O, and Ī“34S values) of modern human body tissues for provenancing of unknown individuals in forensics is increasing. Tooth dentine develops during childhood and adolescence, therefore providing geographical information from that period of life. Tooth apatite Ī“18O values are commonly used for the reconstruction of drinking water values, and Hā€“Cā€“Nā€“S isotope ratios in collagen supply additional information about the composition of diet. We tested if dentine collagen Ī“2H values provide similar information to apatite Ī“18O values with a proofā€ofā€concept study. Methods Tooth samples were taken from modernā€day individuals born in different regions of the world. Apatite and collagen were prepared from dentine. Stable isotope analyses were performed on apatite phosphate oxygen (Ī“18Ophos); oxygen and carbon of the structural carbonate (Ī“18Ocarb, Ī“13Ccarb); and hydrogen, carbon, nitrogen, and sulfur of the collagen (Ī“2Hcoll, Ī“13Ccoll, Ī“15N, Ī“34S). Results Ī“18Ophos, Ī“18Ocarb, and Ī“2Hcoll values are highly correlated in modern human dentine. There are significant relationships of Ī“18O values in the apatite fraction and Ī“2H values in the collagen fraction with local Ī“18O and Ī“2H precipitation values, respectively. Pearson correlation coefficients indicate no direct relationship between Ī“15N values and the isotope ratios of any other element. Weak relationships exist between collagen Ī“34S values and Ī“18Ocarb or Ī“18Ophos values. Conclusions The highly significant correlation of Ī“18Ophos, Ī“18Ocarb, and Ī“2Hcoll values in the modern human dentine implies that measurement of Ī“2H values in collagen or Ī“18O values in bioapatite will provide reliable information about the climate at the person's whereabouts

    An evaluation of indices for quantifying tuberculosis transmission using genotypes of pathogen isolates

    Get PDF
    BACKGROUND: Infectious diseases are often studied by characterising the population structure of the pathogen using genetic markers. An unresolved problem is the effective quantification of the extent of transmission using genetic variation data from such pathogen isolates. METHODS: It is important that transmission indices reflect the growth of the infectious population as well as account for the mutation rate of the marker and the effects of sampling. That is, while responding to this growth rate, indices should be unresponsive to the sample size and the mutation rate. We use simulation methods taking into account both the mutation and sampling processes to evaluate indices designed to quantify transmission of tuberculosis. RESULTS: Previously proposed indices generally perform inadequately according to the above criteria, with the partial exception of the recently proposed Transmission-Mutation Index. CONCLUSION: Any transmission index needs to take into account mutation of the marker and the effects of sampling. Simple indices are unlikely to capture the full complexity of the underlying processes

    Multi-parallel qPCR provides increased sensitivity and diagnostic breadth for gastrointestinal parasites of humans: field-based inferences on the impact of mass deworming

    Get PDF
    BACKGROUND: Although chronic morbidity in humans from soil transmitted helminth (STH) infections can be reduced by anthelmintic treatment, inconsistent diagnostic tools make it difficult to reliably measure the impact of deworming programs and often miss light helminth infections. METHODS: Cryopreserved stool samples from 796 people (aged 2-81 years) in four villages in Bungoma County, western Kenya, were assessed using multi-parallel qPCR for 8 parasites and compared to point-of-contact assessments of the same stools by the 2-stool 2-slide Kato-Katz (KK) method. All subjects were treated with albendazole and all Ascaris lumbricoides expelled post-treatment were collected. Three months later, samples from 633 of these people were re-assessed by both qPCR and KK, re-treated with albendazole and the expelled worms collected. RESULTS: Baseline prevalence by qPCR (nā€‰=ā€‰796) was 17 % for A. lumbricoides, 18 % for Necator americanus, 41 % for Giardia lamblia and 15% for Entamoeba histolytica. The prevalence was <1% for Trichuris trichiura, Ancylostoma duodenale, Strongyloides stercoralis and Cryptosporidium parvum. The sensitivity of qPCR was 98% for A. lumbricoides and N. americanus, whereas KK sensitivity was 70% and 32%, respectively. Furthermore, qPCR detected infections with T. trichiura and S. stercoralis that were missed by KK, and infections with G. lamblia and E. histolytica that cannot be detected by KK. Infection intensities measured by qPCR and by KK were correlated for A. lumbricoides (rā€‰=ā€‰0.83, pā€‰<ā€‰0.0001) and N. americanus (rā€‰=ā€‰0.55, pā€‰<ā€‰0.0001). The number of A. lumbricoides worms expelled was correlated (pā€‰<ā€‰0.0001) with both the KK (rā€‰=ā€‰0.63) and qPCR intensity measurements (rā€‰=ā€‰0.60). CONCLUSIONS: KK may be an inadequate tool for stool-based surveillance in areas where hookworm or Strongyloides are common or where intensity of helminth infection is low after repeated rounds of chemotherapy. Because deworming programs need to distinguish between populations where parasitic infection is controlled and those where further treatment is required, multi-parallel qPCR (or similar high throughput molecular diagnostics) may provide new and important diagnostic information

    Coagulation Factor Xa Induces Proinflammatory Responses in Cardiac Fibroblasts via Activation of Protease-Activated Receptor-1

    Get PDF
    Coagulation factor (F) Xa induces proinflammatory responses through activation of protease-activated receptors (PARs). However, the effect of FXa on cardiac fibroblasts (CFs) and the contribution of PARs in FXa-induced cellular signalling in CF has not been fully characterised. To answer these questions, human and rat CFs were incubated with FXa (or TRAP-14, PAR-1 agonist). Gene expression of pro-fibrotic and proinflammatory markers was determined by qRT-PCR after 4 and 24 h. Gene silencing of F2R (PAR-1) and F2RL1 (PAR-2) was achieved using siRNA. MCP-1 protein levels were measured by ELISA of FXa-conditioned media at 24 h. Cell proliferation was assessed after 24 h of incubation with FXa Ā± SCH79797 (PAR-1 antagonist). In rat CFs, FXa induced upregulation of Ccl2 (MCP-1; >30-fold at 4 h in atrial and ventricular CF) and Il6 (IL-6; Ā±7-fold at 4 h in ventricular CF). Increased MCP-1 protein levels were detected in FXa-conditioned media at 24 h. In human CF, FXa upregulated the gene expression of CCL2 (>3-fold) and IL6 (>4-fold) at 4 h. Silencing of F2R (PAR-1 gene), but not F2RL1 (PAR-2 gene), downregulated this effect. Selective activation of PAR-1 by TRAP-14 increased CCL2 and IL6 gene expression; this was prevented by F2R (PAR-1 gene) knockdown. Moreover, SCH79797 decreased FXa-induced proliferation after 24 h. In conclusion, our study shows that FXa induces overexpression of proinflammatory genes in human CFs via PAR-1, which was found to be the most abundant PARs isoform in this cell type

    Psychological Functioning and Disease-Related Quality of Life in Pediatric Patients With an Implantable Cardioverter Defibrillator

    Get PDF
    The objective of this multicenter study was to evaluate psychological functioning and disease-related quality of life (DRQoL) in pediatric patients with an implantable cardioverter defibrillator (ICD) in The Netherlands. Thirty patients were investigated; the mean age was 16.3Ā years, and the mean duration of implantation was 3.6Ā years. To assess psychological problems, three domains of the Symptom Checklist (SCL-90-R) were administered to the 25 patientsĀ >13Ā years old. DRQoL was assessed with a disease-specific pediatric questionnaire, the short-form 11-item Worries About (WA)ICDs Scale. PatientsĀ ā‰„13Ā years old scored significantly higher than the reference group on the domains of anxiety, depression, and sleeping problems of the SCL-90-R (TĀ =Ā 7.5, pĀ <Ā 0.001; TĀ =Ā 5.4, pĀ <Ā 0.001; and TĀ =Ā 7.8, pĀ <Ā 0.001, respectively). Patients who had received an (in)appropriate shock reported more depressive symptoms (TĀ =Ā 2.1, pĀ <Ā 0.03). Patients withĀ >2Ā years implant duration (NĀ =Ā 19) or who had received an (in)appropriate shock (NĀ =Ā 13) showed lower DRQoL scores on the modified WAICD (TĀ =Ā 2.1, pĀ <Ā 0.04; TĀ =Ā 2.1, pĀ <Ā 0.5, respectively). Age at implantation or underlying disease did not influence psychological problems or DRQoL. Young ICD patients showed more anxiety, depression, and sleeping disorders. Worries were increased among patients with ICD shocks and in those who had their ICD implanted forĀ >2Ā years. To determine psychological problems and help children to learn to cope with shocks, proper guidance and monitoring of young ICD patients are recommended

    Strain-Dependent Differences in Bone Development, Myeloid Hyperplasia, Morbidity and Mortality in Ptpn2-Deficient Mice

    Get PDF
    Single nucleotide polymorphisms in the gene encoding the protein tyrosine phosphatase TCPTP (encoded by PTPN2) have been linked with the development of autoimmunity. Here we have used Cre/LoxP recombination to generate Ptpn2ex2āˆ’/ex2āˆ’ mice with a global deficiency in TCPTP on a C57BL/6 background and compared the phenotype of these mice to Ptpn2āˆ’/āˆ’ mice (BALB/c-129SJ) generated previously by homologous recombination and backcrossed onto the BALB/c background. Ptpn2ex2āˆ’/ex2āˆ’ mice exhibited growth retardation and a median survival of 32 days, as compared to 21 days for Ptpn2āˆ’/āˆ’ (BALB/c) mice, but the overt signs of morbidity (hunched posture, piloerection, decreased mobility and diarrhoea) evident in Ptpn2āˆ’/āˆ’ (BALB/c) mice were not detected in Ptpn2ex2āˆ’/ex2āˆ’ mice. At 14 days of age, bone development was delayed in Ptpn2āˆ’/āˆ’ (BALB/c) mice. This was associated with increased trabecular bone mass and decreased bone remodeling, a phenotype that was not evident in Ptpn2ex2āˆ’/ex2āˆ’ mice. Ptpn2ex2āˆ’/ex2āˆ’ mice had defects in erythropoiesis and B cell development as evident in Ptpn2āˆ’/āˆ’ (BALB/c) mice, but not splenomegaly and did not exhibit an accumulation of myeloid cells in the spleen as seen in Ptpn2āˆ’/āˆ’ (BALB/c) mice. Moreover, thymic atrophy, another feature of Ptpn2āˆ’/āˆ’ (BALB/c) mice, was delayed in Ptpn2ex2āˆ’/ex2āˆ’ mice and preceded by an increase in thymocyte positive selection and a concomitant increase in lymph node T cells. Backcrossing Ptpn2āˆ’/āˆ’ (BALB/c) mice onto the C57BL/6 background largely recapitulated the phenotype of Ptpn2ex2āˆ’/ex2āˆ’ mice. Taken together these results reaffirm TCPTP's important role in lymphocyte development and indicate that the effects on morbidity, mortality, bone development and the myeloid compartment are strain-dependent

    The use of mesh in acute hernia: frequency and outcome in 99 cases

    Get PDF
    Background: Incarceration of inguinal, umbilical and cicatricial hernias is a frequent problem. However, little is known about the relationship between the use of mesh and outcome after surgery. The goal of this study was to describe the relationship between the use of mesh in incarcerated hernia and the clinical outcome. Patients and methods: Correspondence, operation reports and patient files between January 1995 and December 2005 of patients presented at one academic and one teaching hospital in Rotterdam were searched for the following keywords: incarceration, strangulation and hernia. The patient characteristics, clinical presentation, pre-operative findings and clinical course were scored and analysed. Results: A total of 203 patients could be identified: 76 inguinal, 52 umbilical, 39 incisional, 14 epigastric, 14 femoral, five trocar and three spigelian hernias. In the statistical analysis, epigastric, femoral, trocar and spigelian hernias were pooled, due to their small group sizes. One patient was excluded from the analysis because the hernia was not corrected during operation. In total, 99 hernias were repaired using mesh versus 103 primary suture repairs. Twenty-five wound infections were registered (12.3%). One mesh was removed during a reintervention for anastomotic leakage, although no signs of wound infection were present. Nine patients died, none of them due to wound-related problems [one cardiovascular, one ruptured aneurysm, two anastomotic leakage, two sepsis e causa incognita (e.c.i.), three pulmonary complications]. Univariate analysis showed that female patients (PĀ =Ā 0.007), adipose patients (PĀ =Ā 0.016), patients with an umbilical hernia (PĀ =Ā 0.01) and patients who underwent a bowel resection (PĀ =Ā 0.015) had a significantly higher rate of wound infections. The type of repair (e.g. primary suture or mesh), use of antibiotic prophylaxis, gender, ASA class and age showed no significant relation with post-operative wound infection. After logistic regression analysis, only bowel resection (PĀ =Ā 0.020) showed a significant relation with post-operative wound infection. Conclusions: Wound infection rates are high after the correction of acute hernia, but clinical consequences are relatively low. Mesh correction of an acute hernia seems to be safe and should be considered in every incarcerated hernia
    • ā€¦
    corecore