Mechanisms Generating Dichotomies in the Life Strategies of Heterotrophic Marine Prokaryotes

Understanding the mechanisms that generate and maintain diversity in marine prokaryotic communities is one of the main challenges for contemporary marine microbiology. We here review how observational, experimental, and theoretical evidence converge on the conclusion that the marine pelagic community of heterotrophic prokaryotes consists of organisms with two main types of life strategies. We illustrate this dichotomy by SAR11 and Vibrio spp. as typical representatives of the two strategies. A theory for life strategy dichotomy exists in classical r/K-selection. We here discuss an additional dichotomy introduced by what we term S/L-selection (for Small and Large, respectively). While r/K-selection focuses on the role of environmental disturbances, steady-state models suggest that high abundance at species level should be closely related to a low trade-off between competition and defense. We summarize literature indicating that the high availability of organic C is an essential environmental factor favoring Vibrio spp. and suggest that the essence of the generalized L-strategy is to reduce the competition-predator defense trade-off by using non-limiting organic C to increase size. The “streamlining” theory that has been suggested for the S-strategist SAR11 proposes the opposite: that low trade-off is achieved by a reduction in size. We show how this apparent contradiction disappears when the basic assumptions of diffusion-limited uptake are considered. We propose a classification scheme that combines S/L and r/K-selection using the two dimensions of organic C availability and environmental disturbance. As organic C in terrestrial runoff and size of the oligotrophic oceanic gyres are both changing, habitat size for both S- and L-strategists are affected by global change. A theory capturing the main aspects of prokaryote life strategies is therefore crucial for predicting responses of the marine microbial food web to climate change and other anthropogenic influences.publishedVersio

Explaining microbial population genomics through phage predation

The remarkable diversity of genes within the pool of prokaryotic genomes belonging to the same species or pan-genome is difficult to reconcile with the widely accepted paradigm which asserts that periodic selection within bacterial populations would regularly purge genomic diversity by clonal replacement. Recent evidence from metagenomics indicates that even within a single sample a large diversity of genomes can be present for a single species. We have found that much of the differential gene content affects regions that are potential phage recognition targets. We therefore propose the operation of Constant-Diversity dynamics in which the diversity of prokaryotic populations is preserved by phage predation. We provide supporting evidence for this model from metagenomics, mathematical analysis and computer simulations. Periodic selection and phage predation dynamics are not mutually exclusive; we compare their predictions to indicate under which ecological circumstances each dynamics could predominate

Current state of laparoscopic and robotic surgery

Minimally invasive surgical innovation has exploded in recent times. Currently, conventional laparoscopy is most widely adopted as the costs are relatively low. However, robotics and single port surgery are leading a revolution in surgery for wealthy health-care systems. We explore the historical and contemporary areas of this evolution

Modelling of point and non-point source pollution of nitrate with SWAT in the river Dill, Germany

International audienceWe used the Soil and Water Assessment Tool (SWAT) to simulate point and non-point source pollution of nitrate in a mesoscale mountainous catchment. The results show that the model efficiency for daily discharge is 0.81 for the calibration period (November 1990 to December 1993) and 0.56 for the validation period (April 2000 to January 2003). The model efficiency for monthly nitrate load is 0.66 and 0.77 for the calibration period (April 2000 to March 2002) and validation period (April 2002 to January 2003), respectively. However, the model efficiency for daily loads is low (0.15), which cannot only be attributed to the quality of input data of point source effluents. An analysis of the internal fluxes and cycles of nitrogen pointed out considerable weaknesses in the models conceptualisation of the nitrogen modules which will be improved in future research

Assessing the model performance of an integrated hydrological and biogeochemical model for discharge and nitrate load predictions

International audienceIn this study, we evaluate the performance of the SWAT-N model, a modified version of the widely used SWAT version, for discharge and nitrate predictions at the mesoscale Dill catchment (Germany) for a 5-year period. The underlying question is, whether the model efficiency is sufficient for scenario analysis of land-use changes on both water quantity and quality. The Shuffled Complex Evolution (SCE-UA) algorithm is used to calibrate the model for daily discharge at the catchments outlet. Model performance is assessed with a split-sampling as well as a proxy-basin test using recorded hydrographs of four additional gauges located within the catchment. The efficiency regarding nitrate load simulation is assessed without further calibration on a daily, log-daily, weekly, and monthly basis as compared to observations derived from an intensive sampling campaign conducted at the catchments outlet. A new approach is employed to test the spatial consistency of the model, where simulated longitudinal profiles of nitrate concentrations were compared with observed longitudinal profiles. It is concluded that the model efficiency of SWAT-N is sufficient for the assessment of scenarios for daily discharge predictions. SWAT-N can be employed without further calibration for nitrate load simulations on both a weekly and monthly basis with an acceptable degree of accuracy. However, the model efficiency for daily nitrate load is insufficient, which can be attributed to both data uncertainty (i.e. point-source effluents and actual farming practise) as well as structural errors. The simulated longitudinal profiles meet the observations reasonably well, which suggests that the model is spatially consistent

Direct measurement of diurnal polar motion by ring laser gyroscopes

We report the first direct measurements of the very small effect of forced diurnal polar motion, successfully observed on three of our large ring lasers, which now measure the instantaneous direction of Earth's rotation axis to a precision of 1 part in 10^8 when averaged over a time interval of several hours. Ring laser gyroscopes provide a new viable technique for directly and continuously measuring the position of the instantaneous rotation axis of the Earth and the amplitudes of the Oppolzer modes. In contrast, the space geodetic techniques (VLBI, SLR, GPS, etc.) contain no information about the position of the instantaneous axis of rotation of the Earth, but are sensitive to the complete transformation matrix between the Earth-fixed and inertial reference frame. Further improvements of gyroscopes will provide a powerful new tool for studying the Earth's interior.Comment: 5 pages, 4 figures, agu2001.cl

Winter−spring transition in the subarctic Atlantic: microbial response to deep mixing and pre-bloom production

In temperate, subpolar and polar marine systems, the classical perception is that diatoms initiate the spring bloom and thereby mark the beginning of the productive season. Contrary to this view, we document an active microbial food web dominated by pico- and nanoplankton prior to the diatom bloom, a period with excess nutrients and deep convection of the water column. During repeated visits to stations in the deep Iceland and Norwegian basins and the shallow Shetland Shelf (26 March to 29 April 2012), we investigated the succession and dynamics of photosynthetic and heterotrophic microorganisms. We observed that the early phytoplankton production was followed by a decrease in the carbon:nitrogen ratio of the dissolved organic matter in the deep mixed stations, an increase in heterotrophic prokaryote (bacteria) abundance and activity (indicated by the high nucleic acid:low nucleic acid bacteria ratio), and an increase in abundance and size of heterotrophic protists. The major chl a contribution in the early winter-spring transition was found in the fraction 50 µm) were stimulated by deep mixing later in the period, while picophytoplankton were unaffected by mixing; both physical and biological reasons for this development are discussed herein

Linking bacterial community structure to advection and environmental impact along a coast-fjord gradient of the Sognefjord, western Norway

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