814 research outputs found
Magnetic domain formation in itinerant metamagnets
We examine the effects of long-range dipolar forces on metamagnetic
transitions and generalize the theory of Condon domains to the case of an
itinerant electron system undergoing a first-order metamagnetic transition. We
demonstrate that within a finite range of the applied field, dipolar
interactions induce a spatial modulation of the magnetization in the form of
stripes or bubbles. Our findings are consistent with recent observations in the
bilayer ruthenate SrRuO.Comment: 4 pages, 3 figures, minor changes, references adde
Botulinum neurotoxin type C protease induces apoptosis in differentiated human neuroblastoma cells
Neuroblastomas constitute a major cause of cancer-related deaths in young children. In recent years, a number of translation-inhibiting enzymes have been evaluated for killing neuroblastoma cells. Here we investigated the potential vulnerability of human neuroblastoma cells to protease activity derived from botulinum neurotoxin type C. We show that following retinoic acid treatment, human neuroblastoma cells, SiMa and SH-SY5Y, acquire a neuronal phenotype evidenced by axonal growth and expression of neuronal markers. Botulinum neurotoxin type C which cleaves neuron-specific SNAP25 and syntaxin1 caused apoptotic death only in differentiated neuroblastoma cells. Direct comparison of translation-inhibiting enzymes and the type C botulinum protease revealed one order higher cytotoxic potency of the latter suggesting a novel neuroblastoma-targeting pathway. Our mechanistic insights revealed that loss of ubiquitous SNAP23 due to differentiation coupled to SNAP25 cleavage due to botulinum activity may underlie the apoptotic death of human neuroblastoma cells
Exploring the functional domain and the target of the tetanus toxin light chain in neurohypophysial terminals
The tetanus toxin light chain blocks calcium induced vasopressin release from neurohypophysial nerve terminals. Here we show that histidine residue 233 within the putative zinc binding motif of the tetanus toxin light chain is essential for the inhibition of exocytosis, in the rat. The zinc chelating agent dipicolinic acid as well as captopril, an inhibitor of zinc-dependent peptidases, counteract the effect of the neurotoxin. Synthetic peptides, the sequences of which correspond to motifs present in the cytoplasmic domain of the synaptic vesicle membrane protein synaptobrevin 1 and 2, prevent the effect of the tetanus toxin light chain.
Our results indicate that zinc bound to the zinc binding motif constitutes the active site of the tetanus toxin light chain. Moreover they suggest that cleavage of synaptobrevin by the neurotoxin causes the inhibition of exocytotic release of vasopressin from secretory granules
Collective fields in the functional renormalization group for fermions, Ward identities, and the exact solution of the Tomonaga-Luttinger model
We develop a new formulation of the functional renormalization group (RG) for
interacting fermions. Our approach unifies the purely fermionic formulation
based on the Grassmannian functional integral, which has been used in recent
years by many authors, with the traditional Wilsonian RG approach to quantum
systems pioneered by Hertz [Phys. Rev. B 14, 1165 (1976)], which attempts to
describe the infrared behavior of the system in terms of an effective bosonic
theory associated with the soft modes of the underlying fermionic problem. In
our approach, we decouple the interaction by means of a suitable
Hubbard-Stratonovich transformation (following the Hertz-approach), but do not
eliminate the fermions; instead, we derive an exact hierarchy of RG flow
equations for the irreducible vertices of the resulting coupled field theory
involving both fermionic and bosonic fields. The freedom of choosing a momentum
transfer cutoff for the bosonic soft modes in addition to the usual band cutoff
for the fermions opens the possibility of new RG schemes. In particular, we
show how the exact solution of the Tomonaga-Luttinger model emerges from the
functional RG if one works with a momentum transfer cutoff. Then the Ward
identities associated with the local particle conservation at each Fermi point
are valid at every stage of the RG flow and provide a solution of an infinite
hierarchy of flow equations for the irreducible vertices. The RG flow equation
for the irreducible single-particle self-energy can then be closed and can be
reduced to a linear integro-differential equation, the solution of which yields
the result familiar from bosonization. We suggest new truncation schemes of the
exact hierarchy of flow equations, which might be useful even outside the weak
coupling regime.Comment: 27 pages, 15 figures; published version, some typos correcte
Exact integral equation for the renormalized Fermi surface
The true Fermi surface of a fermionic many-body system can be viewed as a
fixed point manifold of the renormalization group (RG). Within the framework of
the exact functional RG we show that the fixed point condition implies an exact
integral equation for the counterterm which is needed for a self-consistent
calculation of the Fermi surface. In the simplest approximation, our integral
equation reduces to the self-consistent Hartree-Fock equation for the
counterterm.Comment: 5 pages, 1 figur
Loss of AP-3 function affects spontaneous and evoked release at hippocampal mossy fiber synapses
Synaptic vesicle (SV) exocytosis mediating neurotransmitter release occurs
spontaneously at low intraterminal calcium concentrations and is stimulated by
a rise in intracellular calcium. Exocytosis is compensated for by the
reformation of vesicles at plasma membrane and endosomes. Although the adaptor
complex AP-3 was proposed to be involved in the formation of SVs from
endosomes, whether its function has an indirect effect on exocytosis remains
unknown. Using mocha mice, which are deficient in functional AP-3, we identify
an AP-3-dependent tetanus neurotoxin-resistant asynchronous release that can be
evoked at hippocampal mossy fiber (MF) synapses. Presynaptic targeting of the
tetanus neurotoxin-resistant vesicle soluble N-ethylmaleimide-sensitive factor
attachment protein receptor (SNARE) tetanus neurotoxin-insensitive
vesicle-associated membrane protein (TI-VAMP) is lost in mocha hippocampal MF
terminals, whereas the localization of synaptobrevin 2 is unaffected. In
addition, quantal release in mocha cultures is more frequent and more sensitive
to sucrose. We conclude that lack of AP-3 results in more constitutive
secretion and loss of an asynchronous evoked release component, suggesting an
important function of AP-3 in regulating SV exocytosis at MF terminals
On a partially reduced phase space quantisation of general relativity conformally coupled to a scalar field
The purpose of this paper is twofold: On the one hand, after a thorough
review of the matter free case, we supplement the derivations in our companion
paper on 'loop quantum gravity without the Hamiltonian constraint' with
calculational details and extend the results to standard model matter, a
cosmological constant, and non-compact spatial slices. On the other hand, we
provide a discussion on the role of observables, focussed on the situation of a
symmetry exchange, which is key to our derivation. Furthermore, we comment on
the relation of our model to reduced phase space quantisations based on
deparametrisation.Comment: 51 pages, 5 figures. v2: Gauge condition used shown to coincide with
CMC gauge. Minor clarifications and correction
Strong Longitudinal Magnetic Fluctuations near Critical End Point in UCoAl: A ^59Co-NMR Study
We report ^59Co-NMR measurements in UCoAl where a metamagnetism occurs due to
enhancement of ferromagnetism by magnetic field. The metamagnetic transition
from a paramagnetic (PM) state to a ferromagnetic state is a first order
transition at low temperatures, but it changes to a crossover at high
temperatures on crossing the critical end pint (CEP) at T_CEP ~ 12 K. The
contrasting behavior between the relaxation rates 1/T_1 and 1/T_2 suggests that
the longitudinal magnetic fluctuation of U moment is strongly enhanced
especially near the CEP. A wide diffusion of the fluctuation from the CEP can
be confirmed even in the PM state where the magnetic transition does not occur.Comment: 5pages, 6 figures, to be published in J. Phys. Soc. Jp
Classical field theory on Lie algebroids: Variational aspects
The variational formalism for classical field theories is extended to the
setting of Lie algebroids. Given a Lagrangian function we study the problem of
finding critical points of the action functional when we restrict the fields to
be morphisms of Lie algebroids. In addition to the standard case, our formalism
includes as particular examples the case of systems with symmetry (covariant
Euler-Poincare and Lagrange Poincare cases), Sigma models or Chern-Simons
theories.Comment: Talk deliverd at the 9th International Conference on Differential
Geometry and its Applications, Prague, September 2004. References adde
Tiered Human Integrated Sequence Search Databases for Shotgun Proteomics.
The results of analysis of shotgun proteomics mass spectrometry data can be greatly affected by the selection of the reference protein sequence database against which the spectra are matched. For many species there are multiple sources from which somewhat different sequence sets can be obtained. This can lead to confusion about which database is best in which circumstances-a problem especially acute in human sample analysis. All sequence databases are genome-based, with sequences for the predicted gene and their protein translation products compiled. Our goal is to create a set of primary sequence databases that comprise the union of sequences from many of the different available sources and make the result easily available to the community. We have compiled a set of four sequence databases of varying sizes, from a small database consisting of only the ∼20,000 primary isoforms plus contaminants to a very large database that includes almost all nonredundant protein sequences from several sources. This set of tiered, increasingly complete human protein sequence databases suitable for mass spectrometry proteomics sequence database searching is called the Tiered Human Integrated Search Proteome set. In order to evaluate the utility of these databases, we have analyzed two different data sets, one from the HeLa cell line and the other from normal human liver tissue, with each of the four tiers of database complexity. The result is that approximately 0.8%, 1.1%, and 1.5% additional peptides can be identified for Tiers 2, 3, and 4, respectively, as compared with the Tier 1 database, at substantially increasing computational cost. This increase in computational cost may be worth bearing if the identification of sequence variants or the discovery of sequences that are not present in the reviewed knowledge base entries is an important goal of the study. We find that it is useful to search a data set against a simpler database, and then check the uniqueness of the discovered peptides against a more complex database. We have set up an automated system that downloads all the source databases on the first of each month and automatically generates a new set of search databases and makes them available for download at http://www.peptideatlas.org/thisp/
- …
