56 research outputs found
Unveiling the History of a Peculiar Weevil-Plant Interaction in South America: A Phylogeographic Approach to Hydnorobius hydnorae (Belidae) Associated with Prosopanche americana (Aristolochiaceae)
Interspecific interactions take place over both long and short time-frames. However it is not completely understood if the interacting-partners persisted, migrated, or expanded in concert with Quaternary climate and landscape changes. We aim to understand whether there is concordance between the specialist weevil Hydnorobius hydnorae and its parasitic host plant, Prosopanche Americana, in space and time. We aim to determine whether Prosopanche had already established its range, and Hydnorobius later actively colonized this rare resource; or, if both host plant and herbivore expanded their range concomitantly. We performed population genetic, phylogeographic and Bayesian diffusion analysis of Cytochrome B sequences from eighteen weevil localities and used paleodistribution models to infer host plant dispersal patterns. We found strong but uneven population structure across the range for H. hydnorae with weak signals of population growth, and haplotype network structure and SAMOVA groupings closely following biogeographic region boundaries. The ancestral areas for both Hydnorobius and Prosopanche are reconstructed in San Luis province within the Chaco Biogeographic province. Our results indicate a long trajectory of host-tracking through space and time, where the weevil has expanded its geographic range following its host plant, without significant demographic growth. We explore the past environmental changes that could underlie the boundaries between locality groups. We suggest that geographic dispersal without population growth in Hydnorobius could be enabled by the scarcity of the host plant itself, allowing for slow expansion rates and stable populations, with no need for significant demographic growth pulses to support range expansion.Fil: Sequeira, Andrea S.. Wellesley College; Estados UnidosFil: Rocamundi, Nicolás. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto Multidisciplinario de Biología Vegetal. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales. Instituto Multidisciplinario de Biología Vegetal; ArgentinaFil: Ferrer, Maria Silvia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto Argentino de Investigaciones de las Zonas Áridas. Provincia de Mendoza. Instituto Argentino de Investigaciones de las Zonas Áridas. Universidad Nacional de Cuyo. Instituto Argentino de Investigaciones de las Zonas Áridas; ArgentinaFil: Baranzelli, Matias Cristian. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto Multidisciplinario de Biología Vegetal. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales. Instituto Multidisciplinario de Biología Vegetal; ArgentinaFil: Marvaldi, Adriana. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad Nacional de La Plata. Facultad de Ciencias Naturales y Museo; Argentin
Unveiling the History of a Peculiar Weevil-Plant Interaction in South America: A Phylogeographic Approach to <i>Hydnorobius hydnorae</i> (Belidae) Associated with <i>Prosopanche americana</i> (Aristolochiaceae)
Interspecific interactions take place over both long and short time-frames. However it is not completely understood if the interacting-partners persisted, migrated, or expanded in concert with Quaternary climate and landscape changes. We aim to understand whether there is concordance between the specialist weevil Hydnorobius hydnorae and its parasitic host plant, Prosopanche Americana, in space and time. We aim to determine whether Prosopanche had already established its range, and Hydnorobius later actively colonized this rare resource; or, if both host plant and herbivore expanded their range concomitantly. We performed population genetic, phylogeographic and Bayesian diffusion analysis of Cytochrome B sequences from eighteen weevil localities and used paleodistribution models to infer host plant dispersal patterns. We found strong but uneven population structure across the range for H. hydnorae with weak signals of population growth, and haplotype network structure and SAMOVA groupings closely following biogeographic region boundaries. The ancestral areas for both Hydnorobius and Prosopanche are reconstructed in San Luis province within the Chaco Biogeographic province. Our results indicate a long trajectory of host-tracking through space and time, where the weevil has expanded its geographic range following its host plant, without significant demographic growth. We explore the past environmental changes that could underlie the boundaries between locality groups. We suggest that geographic dispersal without population growth in Hydnorobius could be enabled by the scarcity of the host plant itself, allowing for slow expansion rates and stable populations, with no need for significant demographic growth pulses to support range expansion.Facultad de Ciencias Naturales y Muse
Unveiling the History of a Peculiar Weevil-Plant Interaction in South America: A Phylogeographic Approach to <i>Hydnorobius hydnorae</i> (Belidae) Associated with <i>Prosopanche americana</i> (Aristolochiaceae)
Interspecific interactions take place over both long and short time-frames. However it is not completely understood if the interacting-partners persisted, migrated, or expanded in concert with Quaternary climate and landscape changes. We aim to understand whether there is concordance between the specialist weevil Hydnorobius hydnorae and its parasitic host plant, Prosopanche Americana, in space and time. We aim to determine whether Prosopanche had already established its range, and Hydnorobius later actively colonized this rare resource; or, if both host plant and herbivore expanded their range concomitantly. We performed population genetic, phylogeographic and Bayesian diffusion analysis of Cytochrome B sequences from eighteen weevil localities and used paleodistribution models to infer host plant dispersal patterns. We found strong but uneven population structure across the range for H. hydnorae with weak signals of population growth, and haplotype network structure and SAMOVA groupings closely following biogeographic region boundaries. The ancestral areas for both Hydnorobius and Prosopanche are reconstructed in San Luis province within the Chaco Biogeographic province. Our results indicate a long trajectory of host-tracking through space and time, where the weevil has expanded its geographic range following its host plant, without significant demographic growth. We explore the past environmental changes that could underlie the boundaries between locality groups. We suggest that geographic dispersal without population growth in Hydnorobius could be enabled by the scarcity of the host plant itself, allowing for slow expansion rates and stable populations, with no need for significant demographic growth pulses to support range expansion.Facultad de Ciencias Naturales y Muse
Are flightless Galapaganus weevils older than the Galapagos islands they inhabit?
The 15 species in the weevil genus Galapaganus Lanteri 1992 (Entiminae: Curculionidae: Coleoptera) are distributed on coastal Peril and Ecuador and include 10 flightless species endemic to the Galapagos islands. These beetles thus provide a promising system through which to investigate the patterns and processes of evolution on Darwin's archipelago. Sequences of the mtDNA locus encoding cytochrome oxidase subunit I (COI) were obtained from samples of seven species occurring in different ecological zones of the oldest south-eastern islands: San Cristobal, Espanola and Floreana, and the central island Santa Cruz. The single most parsimonious tree obtained shows two well-supported clades that correspond to the species groups previously defined by morphological characters. Based on a mtDNA clock calibrated for arthropods, the initial speciation separating the oldest species, G. galapagoensis (Linell) on the oldest island, San Cristobal, from the remaining species in the Galapagos occurred about 7.2 Ma. This estimate exceeds geological ages of the extant emerged islands, although it agrees well with molecular dating of endemic Galapagos iguanas, geckos and lizards. An apparent explanation for the disagreement between geological and molecular time-frames is that about 7 Ma there were emerged islands which subsequently disappeared under ocean waters. This hypothesis has gained support from the recent findings of 11 -Myr-old submarine seamounts (sunken islands), south-east of the present location of the archipelago. Some species within the darwini group may have differentiated on the extant islands, 1-5 Ma.Facultad de Ciencias Naturales y Muse
Are flightless Galapaganus weevils older than the Galapagos islands they inhabit?
The 15 species in the weevil genus Galapaganus Lanteri 1992 (Entiminae: Curculionidae: Coleoptera) are distributed on coastal Peril and Ecuador and include 10 flightless species endemic to the Galapagos islands. These beetles thus provide a promising system through which to investigate the patterns and processes of evolution on Darwin's archipelago. Sequences of the mtDNA locus encoding cytochrome oxidase subunit I (COI) were obtained from samples of seven species occurring in different ecological zones of the oldest south-eastern islands: San Cristobal, Espanola and Floreana, and the central island Santa Cruz. The single most parsimonious tree obtained shows two well-supported clades that correspond to the species groups previously defined by morphological characters. Based on a mtDNA clock calibrated for arthropods, the initial speciation separating the oldest species, G. galapagoensis (Linell) on the oldest island, San Cristobal, from the remaining species in the Galapagos occurred about 7.2 Ma. This estimate exceeds geological ages of the extant emerged islands, although it agrees well with molecular dating of endemic Galapagos iguanas, geckos and lizards. An apparent explanation for the disagreement between geological and molecular time-frames is that about 7 Ma there were emerged islands which subsequently disappeared under ocean waters. This hypothesis has gained support from the recent findings of 11 -Myr-old submarine seamounts (sunken islands), south-east of the present location of the archipelago. Some species within the darwini group may have differentiated on the extant islands, 1-5 Ma.Facultad de Ciencias Naturales y Muse
Are flightless Galapaganus weevils older than the Galapagos islands they inhabit?
The 15 species in the weevil genus Galapaganus Lanteri 1992 (Entiminae: Curculionidae: Coleoptera) are distributed on coastal Peril and Ecuador and include 10 flightless species endemic to the Galapagos islands. These beetles thus provide a promising system through which to investigate the patterns and processes of evolution on Darwin's archipelago. Sequences of the mtDNA locus encoding cytochrome oxidase subunit I (COI) were obtained from samples of seven species occurring in different ecological zones of the oldest south-eastern islands: San Cristobal, Espanola and Floreana, and the central island Santa Cruz. The single most parsimonious tree obtained shows two well-supported clades that correspond to the species groups previously defined by morphological characters. Based on a mtDNA clock calibrated for arthropods, the initial speciation separating the oldest species, G. galapagoensis (Linell) on the oldest island, San Cristobal, from the remaining species in the Galapagos occurred about 7.2 Ma. This estimate exceeds geological ages of the extant emerged islands, although it agrees well with molecular dating of endemic Galapagos iguanas, geckos and lizards. An apparent explanation for the disagreement between geological and molecular time-frames is that about 7 Ma there were emerged islands which subsequently disappeared under ocean waters. This hypothesis has gained support from the recent findings of 11 -Myr-old submarine seamounts (sunken islands), south-east of the present location of the archipelago. Some species within the darwini group may have differentiated on the extant islands, 1-5 Ma.Facultad de Ciencias Naturales y Muse
Protein Kinase G Is Involved in Acute but Not in Long-Term Regulation of Renin Secretion
Pharmacological inhibition of the renin-angiotensin-aldosterone system (RAAS) is, in combination with diuretics, the first-choice treatment for hypertension, although 10-20% of patients do not respond adequately. Next to the RAAS, the nitric oxide/cGMP/protein kinase G (PKG) system is the second fundamental blood pressure regulator. Whether both systems influence each other is not well-studied. It has been shown that nitric oxide (NO) supports renin recruitment via activation of soluble guanylate cyclase (sGC) and subsequent generation of cGMP. Whether this leads to an ensuing activation of PKGs in this context is not known. PKGI alpha, as well as PKGII, is expressed in renin-producing cells. Hence, we analyzed whether these enzymes play a role regarding renin synthesis, secretion, or recruitment. We generated renin-cell-specific PKGI-knockout mice and either stimulated or inhibited the renin system in these mice by salt diets. To exclude the possibility that one kinase isoform can compensate the lack of the other, we also studied double-knockout animals with a conditional knockout of PKGI in juxtaglomerular cells (JG cells) and a ubiquitous knockout of PKGII. We analyzed blood pressure, renin mRNA and renal renin protein content as well as plasma renin concentration. Furthermore, we stimulated the cGMP system in these mice using BAY 41-8543, an sGC stimulator, and examined renin regulation either after acute administration or after 7 days (application once daily). We did not reveal any striking differences regarding long-term renin regulation in the studied mouse models. Yet, when we studied the acute effect of BAY 41-8543 on renin secretion in isolated perfused kidneys as well as in living animals, we found that the administration of the substance led to a significant increase in plasma renin concentration in control animals. This effect was completely abolished in double-knockout animals. However, after 7 days of once daily application, we did not detect a persistent increase in renin mRNA or protein in any studied genotype. Therefore, we conclude that in mice, cGMP and PKG are involved in the acute regulation of renin release but have no influence on long-term renin adjustment
Host-specific gene expression as a tool for introduction success in <i>Naupactus</i> parthenogenetic weevils
Food resource access can mediate establishment success in invasive species, and generalist herbivorous insects are thought to rely on mechanisms of transcriptional plasticity to respond to dietary variation. While asexually reproducing invasives typically have low genetic variation, the twofold reproductive capacity of asexual organisms is a marked advantage for colonization. We studied host-related transcriptional acclimation in parthenogenetic, invasive, and polyphagous weevils: Naupactus cervinus and N. leucoloma. We analyzed patterns of gene expression in three gene categories that can mediate weevil-host plant interactions through identification of suitable host plants, short-term acclimation to host plant defenses, and long-term adaptation to host plant defenses and their pathogens. This approach employed comparative transcriptomic methods to investigate differentially expressed host detection, detoxification, immune defense genes, and pathway-level gene set enrichment. Our results show that weevil gene expression responses can be host plant-specific, and that elements of that response can be transgenerational. Some host plant groups, such as legumes, appear to be more taxing as they elicit a complex gene expression response which is both strong in intensity and specific in identity. However, the weevil response to taxing host plants shares many differentially expressed genes with other stressful situations, such as host plant cultivation conditions and transition to novel host, suggesting that there is an evolutionarily favorable shared gene expression regime for responding to different types of stressful situations. Modulating gene expression in the absence of other avenues for phenotypic adaptation may be an important mechanism of successful colonization for these introduced insects.Facultad de Ciencias Naturales y Muse
Exon expression in lymphoblastoid cell lines from subjects with schizophrenia before and after glucose deprivation
<p>Abstract</p> <p>Background</p> <p>The purpose of this study was to examine the effects of glucose reduction stress on lymphoblastic cell line (LCL) gene expression in subjects with schizophrenia compared to non-psychotic relatives.</p> <p>Methods</p> <p>LCLs were grown under two glucose conditions to measure the effects of glucose reduction stress on exon expression in subjects with schizophrenia compared to unaffected family member controls. A second aim of this project was to identify cis-regulated transcripts associated with diagnosis.</p> <p>Results</p> <p>There were a total of 122 transcripts with significant diagnosis by probeset interaction effects and 328 transcripts with glucose deprivation by probeset interaction probeset effects after corrections for multiple comparisons. There were 8 transcripts with expression significantly affected by the interaction between diagnosis and glucose deprivation and probeset after correction for multiple comparisons. The overall validation rate by qPCR of 13 diagnosis effect genes identified through microarray was 62%, and all genes tested by qPCR showed concordant up- or down-regulation by qPCR and microarray. We assessed brain gene expression of five genes found to be altered by diagnosis and glucose deprivation in LCLs and found a significant decrease in expression of one gene, glutaminase, in the dorsolateral prefrontal cortex (DLPFC). One SNP with previously identified regulation by a 3' UTR SNP was found to influence IRF5 expression in both brain and lymphocytes. The relationship between the 3' UTR rs10954213 genotype and IRF5 expression was significant in LCLs (p = 0.0001), DLPFC (p = 0.007), and anterior cingulate cortex (p = 0.002).</p> <p>Conclusion</p> <p>Experimental manipulation of cells lines from subjects with schizophrenia may be a useful approach to explore stress related gene expression alterations in schizophrenia and to identify SNP variants associated with gene expression.</p
Finding Diagnostically Useful Patterns in Quantitative Phenotypic Data.
Trio-based whole-exome sequence (WES) data have established confident genetic diagnoses in ∼40% of previously undiagnosed individuals recruited to the Deciphering Developmental Disorders (DDD) study. Here we aim to use the breadth of phenotypic information recorded in DDD to augment diagnosis and disease variant discovery in probands. Median Euclidean distances (mEuD) were employed as a simple measure of similarity of quantitative phenotypic data within sets of ≥10 individuals with plausibly causative de novo mutations (DNM) in 28 different developmental disorder genes. 13/28 (46.4%) showed significant similarity for growth or developmental milestone metrics, 10/28 (35.7%) showed similarity in HPO term usage, and 12/28 (43%) showed no phenotypic similarity. Pairwise comparisons of individuals with high-impact inherited variants to the 32 individuals with causative DNM in ANKRD11 using only growth z-scores highlighted 5 likely causative inherited variants and two unrecognized DNM resulting in an 18% diagnostic uplift for this gene. Using an independent approach, naive Bayes classification of growth and developmental data produced reasonably discriminative models for the 24 DNM genes with sufficiently complete data. An unsupervised naive Bayes classification of 6,993 probands with WES data and sufficient phenotypic information defined 23 in silico syndromes (ISSs) and was used to test a "phenotype first" approach to the discovery of causative genotypes using WES variants strictly filtered on allele frequency, mutation consequence, and evidence of constraint in humans. This highlighted heterozygous de novo nonsynonymous variants in SPTBN2 as causative in three DDD probands
- …