179 research outputs found
Psoriasiform pemphigus foliaceus: a report of two cases
Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/91229/1/j.1600-0560.2012.01866.x.pd
Identification of candidate effector genes of <i>Pratylenchus penetrans</i>
Pratylenchus penetrans is one of the most important species of root lesion nematodes (RLNs) because of its detrimental and economic impact in a wide range of crops. Similar to other plantâparasitic nematodes (PPNs), P. penetrans harbours a significant number of secreted proteins that play key roles during parasitism. Here, we combined spatially and temporally resolved nextâgeneration sequencing datasets of P. penetrans to select a list of candidate genes aimed at the identification of a panel of effector genes for this species. We determined the spatial expression of transcripts of 22 candidate effectors within the oesophageal glands of P. penetrans by in situ hybridization. These comprised homologues of known effectors of other PPNs with diverse putative functions, as well as novel pioneer effectors specific to RLNs. It is noteworthy that five of the pioneer effectors encode extremely prolineârich proteins. We then combined in situ localization of effectors with available genomic data to identify a nonâcoding motif enriched in promoter regions of a subset of P. penetrans effectors, and thus a putative hallmark of spatial expression. Expression profiling analyses of a subset of candidate effectors confirmed their expression during plant infection. Our current results provide the most comprehensive panel of effectors found for RLNs. Considering the damage caused by P. penetrans, this information provides valuable data to elucidate the mode of parasitism of this nematode and offers useful suggestions regarding the potential use of P. penetransâspecific target effector genes to control this important pathogen
Atmospheric Retrieval of L Dwarfs: Benchmarking Results and Characterizing the Young Planetary Mass Companion HD 106906 b in the Near-infrared
© 2023. The Author(s). Published by the American Astronomical Society. This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY), https://creativecommons.org/licenses/by/4.0We present model constraints on the atmospheric structure of HD 106906 b, a planetary-mass companion orbiting at a âŒ700 au projected separation around a 15 Myr old stellar binary, using the APOLLO retrieval code on spectral data spanning 1.1â2.5 ÎŒm. C/O ratios can provide evidence for companion formation pathways, as such pathways are ambiguous both at wide separations and at star-to-companion mass ratios in the overlap between the distributions of planets and brown dwarfs. We benchmark our code against an existing retrieval of the field L dwarf 2MASSW J2224â0158, returning a C/O ratio consistent with previous fits to the same JHK s data, but disagreeing in the thermal structure, cloud properties, and atmospheric scale height. For HD 106906 b, we retrieve C/O =0.53â0.25+0.15 , consistent with the C/O ratios expected for HD 106906's stellar association and therefore consistent with a stellar-like formation for the companion. We find abundances of H2O and CO near chemical equilibrium values for a solar metallicity but a surface gravity lower than expected, as well as a thermal profile with sharp transitions in the temperature gradient. Despite high signal-to-noise ratio and spectral resolution, more accurate constraints necessitate data across a broader wavelength range. This work serves as preparation for subsequent retrievals in the era of JWST, as JWST's spectral range provides a promising opportunity to resolve difficulties in fitting low-gravity L dwarfs and also underscores the need for simultaneous comparative retrievals on L-dwarf companions with multiple retrieval codes.Peer reviewe
Correlation effects during liquid infiltration into hydrophobic nanoporous mediums
Correlation effects arising during liquid infiltration into hydrophobic
porous medium are considered. On the basis of these effects a mechanism of
energy absorption at filling porous medium by nonwetting liquid is suggested.
In accordance with this mechanism, the absorption of mechanical energy is a
result expenditure of energy for the formation of menisci in the pores on the
shell of the infinite cluster and expenditure of energy for the formation of
liquid-porous medium interface in the pores belonging to the infinite cluster
of filled pores. It was found that in dependences on the porosity and,
consequently, in dependences on the number of filled pores neighbors, the
thermal effect of filling can be either positive or negative and the cycle of
infiltration-defiltration can be closed with full outflow of liquid. It can
occur under certain relation between percolation properties of porous medium
and the energy characteristics of the liquid-porous medium interface and the
liquid-gas interface. It is shown that a consecutive account of these
correlation effects and percolation properties of the pores space during
infiltration allow to describe all experimental data under discussion
Survey of Visual and Force/Tactile Control of Robots for Physical Interaction in Spain
Sensors provide robotic systems with the information required to perceive the changes that happen in unstructured environments and modify their actions accordingly. The robotic controllers which process and analyze this sensory information are usually based on three types of sensors (visual, force/torque and tactile) which identify the most widespread robotic control strategies: visual servoing control, force control and tactile control. This paper presents a detailed review on the sensor architectures, algorithmic techniques and applications which have been developed by Spanish researchers in order to implement these mono-sensor and multi-sensor controllers which combine several sensors
A Mass Spectrometry-Based Profiling of Interactomes of Viral DDB1- and Cullin Ubiquitin Ligase-Binding Proteins Reveals NF-ÎșB Inhibitory Activity of the HIV-2-Encoded Vpx
Viruses and hosts are situated in a molecular arms race. To avoid morbidity and mortality, hosts evolved antiviral restriction factors. These restriction factors exert selection pressure on the viruses and drive viral evolution toward increasingly efficient immune antagonists. Numerous viruses exploit cellular DNA damage-binding protein 1 (DDB1)-containing Cullin RocA ubiquitin ligases (CRLs) to induce the ubiquitination and subsequent proteasomal degradation of antiviral factors expressed by their hosts. To establish a comprehensive understanding of the underlying protein interaction networks, we performed immuno-affinity precipitations for a panel of DDB1-interacting proteins derived from viruses such as mouse cytomegalovirus (MCMV, Murid herpesvirus [MuHV] 1), rat cytomegalovirus Maastricht MuHV2, rat cytomegalovirus English MuHV8, human cytomegalovirus (HCMV), hepatitis B virus (HBV), and human immunodeficiency virus (HIV). Cellular interaction partners were identified and quantified by mass spectrometry (MS) and validated by classical biochemistry. The comparative approach enabled us to separate unspecific interactions from specific binding partners and revealed remarkable differences in the strength of interaction with DDB1. Our analysis confirmed several previously described interactions like the interaction of the MCMV-encoded interferon antagonist pM27 with STAT2. We extended known interactions to paralogous proteins like the interaction of the HBV-encoded HBx with different Spindlin proteins and documented interactions for the first time, which explain functional data like the interaction of the HIV-2-encoded Vpr with Bax. Additionally, several novel interactions were identified, such as the association of the HIV-2-encoded Vpx with the transcription factor RelA (also called p65). For the latter interaction, we documented a functional relevance in antagonizing NF-ÎșB-driven gene expression. The mutation of the DDB1 binding interface of Vpx significantly impaired NF-ÎșB inhibition, indicating that Vpx counteracts NF-ÎșB signaling by a DDB1- and CRL-dependent mechanism. In summary, our findings improve the understanding of how viral pathogens hijack cellular DDB1 and CRLs to ensure efficient replication despite the expression of host restriction factors
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