Mitochondrial DNA mutations in renal cell carcinomas revealed no general impact on energy metabolism

Previously, renal cell carcinoma tissues were reported to display a marked reduction of components of the respiratory chain. To elucidate a possible relationship between tumourigenesis and alterations of oxidative phosphorylation, we screened for mutations of the mitochondrial DNA (mtDNA) in renal carcinoma tissues and patient-matched normal kidney cortex. Seven of the 15 samples investigated revealed at least one somatic heteroplasmic mutation as determined by denaturating HPLC analysis (DHPLC). No homoplasmic somatic mutations were observed. Actually, half of the mutations presented a level of heteroplasmy below 25%, which could be easily overlooked by automated sequence analysis. The somatic mutations included four known D-loop mutations, four so far unreported mutations in ribosomal genes, one synonymous change in the ND4 gene and four nonsynonymous base changes in the ND2, COI, ND5 and ND4L genes. One renal cell carcinoma tissue showed a somatic A3243G mutation, which is a known frequent cause of MELAS syndrome (mitochondrial encephalomyopathy, lactic acidosis, stroke-like episode) and specific compensatory alterations of enzyme activities of the respiratory chain in the tumour tissue. No difference between histopathology and clinical progression compared to the other tumour tissues was observed. In conclusion, the low abundance as well as the frequently observed low level of heteroplasmy of somatic mtDNA mutations indicates that the decreased aerobic energy capacity in tumour tissue seems to be mediated by a general nuclear regulated mechanism

Simultaneous Excitation of Spins and Pseudospins in the Bilayer ν=1\nu=1 Quantum Hall State

The tilting angular dependence of the energy gap was measured in the bilayer quantum Hall state at the Landau level filling $\nu=1$ by changing the density imbalance between the two layers. The observed gap behavior shows a continuous transformation from the bilayer balanced density state to the monolayer state. Even a sample with 33 K tunneling gap shows the same activation energy anomaly reported by Murphy {\it et al.}. We discuss a possible relation between our experimental results and the quantum Hall ferromagnet of spins and pseudospins.Comment: 4 pages, 4 figure

The scaling of genetic diversity in a changing and fragmented world

Most species do not live in a constant environment over space or time. Their environment is often heterogeneous with a huge variability in resource availability and exposure to pathogens or predators, which may affect the local densities of the species. Moreover, the habitat might be fragmented, preventing free and isotropic migrations between local sub-populations (demes) of a species, making some demes more isolated than others. For example, during the last ice age populations of many species migrated towards refuge areas from which re-colonization originated when conditions improved. However, populations that could not move fast enough or could not adapt to the new environmental conditions faced extinctions. Populations living in these types of dynamic environments are often referred to as metapopulations and modeled as an array of subdivisions (or demes) that exchange migrants with their neighbors. Several studies have focused on the description of their demography, probability of extinction and expected patterns of diversity at different scales. Importantly, all these evolutionary processes may affect genetic diversity, which can affect the chance of populations to persist. In this chapter we provide an overview on the consequences of fragmentation, long-distance dispersal, range contractions and range shifts on genetic diversity. In addition, we describe new methods to detect and quantify underlying evolutionary processes from sampled genetic data.Laboratoire d’Excellence (LABEX) entitled TULIP: (ANR-10-LABX-41)

Taking stock of nature: Essential biodiversity variables explained

In 2013, the Group on Earth Observations Biodiversity Observation Network (GEO BON) developed the framework of Essential Biodiversity Variables (EBVs), inspired by the Essential Climate Variables (ECVs). The EBV framework was developed to distill the complexity of biodiversity into a manageable list of priorities and to bring a more coordinated approach to observing biodiversity on a global scale. However, efforts to address the scientific challenges associated with this task have been hindered by diverse interpretations of the definition of an EBV. Here, the authors define an EBV as a critical biological variable that characterizes an aspect of biodiversity, functioning as the interface between raw data and indicators. This relationship is clarified through a multi-faceted stock market analogy, drawing from relevant examples of biodiversity indicators that use EBVs, such as the Living Planet Index and the UK Spring Index. Through this analogy, the authors seek to make the EBV concept accessible to a wider audience, especially to non-specialists and those in the policy sector, and to more clearly define the roles of EBVs and their relationship with biodiversity indicators. From this we expect to support advancement towards globally coordinated measurements of biodiversity

Evidence for Skyrmions and single spin flips in the integer quantized Hall effect

We have employed tilted-field magnetotransport measurements of the energy gap for the odd-integer quantized Hall states at Landau level filling factors ν=1, 3, and 5 to determine the spin of thermally excited quasielectron-quasihole pairs. At ν=1 our data show that as many as 7 electron spin flips accompany such excitations, while at ν=3 and 5 apparently only a single spin flips. These results lend support to the recent suggestions that "Skyrmionic" quasiparticles are the lowest-lying charged excitations of the fully polarized ν=1 quantum Hall fluid but are not at the higher odd-integer fillings

Optically Pumped NMR Measurements of the Electron Spin Polarization in GaAs Quantum Wells near Landau Level Filling Factor nu=1/3

The Knight shift of Ga-71 nuclei is measured in two different electron-doped multiple quantum well samples using optically pumped NMR. These data are the first direct measurements of the electron spin polarization, P(nu,T)=/max, near nu=1/3. The P(T) data at nu=1/3 probe the neutral spin-flip excitations of a fractional quantum Hall ferromagnet. In addition, the saturated P(nu) drops on either side of nu=1/3, even in a Btot=12 Tesla field. The observed depolarization is quite small, consistent with an average of about 0.1 spin-flips per quasihole (or quasiparticle), a value which does not appear to be explicable by the current theoretical understanding of the FQHE near nu=1/3.Comment: 4 pages (REVTEX), 5 eps figures embedded in text; minor changes, published versio