Phenotypic Signatures Arising from Unbalanced Bacterial Growth

Fluctuations in the growth rate of a bacterial culture during unbalanced growth are generally considered undesirable in quantitative studies of bacterial physiology. Under well-controlled experimental conditions, however, these fluctuations are not random but instead reflect the interplay between intra-cellular networks underlying bacterial growth and the growth environment. Therefore, these fluctuations could be considered quantitative phenotypes of the bacteria under a specific growth condition. Here, we present a method to identify “phenotypic signatures” by time-frequency analysis of unbalanced growth curves measured with high temporal resolution. The signatures are then applied to differentiate amongst different bacterial strains or the same strain under different growth conditions, and to identify the essential architecture of the gene network underlying the observed growth dynamics. Our method has implications for both basic understanding of bacterial physiology and for the classification of bacterial strains

TRY plant trait database - enhanced coverage and open access

Plant traits-the morphological, anatomical, physiological, biochemical and phenological characteristics of plants-determine how plants respond to environmental factors, affect other trophic levels, and influence ecosystem properties and their benefits and detriments to people. Plant trait data thus represent the basis for a vast area of research spanning from evolutionary biology, community and functional ecology, to biodiversity conservation, ecosystem and landscape management, restoration, biogeography and earth system modelling. Since its foundation in 2007, the TRY database of plant traits has grown continuously. It now provides unprecedented data coverage under an open access data policy and is the main plant trait database used by the research community worldwide. Increasingly, the TRY database also supports new frontiers of trait-based plant research, including the identification of data gaps and the subsequent mobilization or measurement of new data. To support this development, in this article we evaluate the extent of the trait data compiled in TRY and analyse emerging patterns of data coverage and representativeness. Best species coverage is achieved for categorical traits-almost complete coverage for 'plant growth form'. However, most traits relevant for ecology and vegetation modelling are characterized by continuous intraspecific variation and trait-environmental relationships. These traits have to be measured on individual plants in their respective environment. Despite unprecedented data coverage, we observe a humbling lack of completeness and representativeness of these continuous traits in many aspects. We, therefore, conclude that reducing data gaps and biases in the TRY database remains a key challenge and requires a coordinated approach to data mobilization and trait measurements. This can only be achieved in collaboration with other initiatives

Effective Rheology of Bubbles Moving in a Capillary Tube

We calculate the average volumetric flux versus pressure drop of bubbles moving in a single capillary tube with varying diameter, finding a square-root relation from mapping the flow equations onto that of a driven overdamped pendulum. The calculation is based on a derivation of the equation of motion of a bubble train from considering the capillary forces and the entropy production associated with the viscous flow. We also calculate the configurational probability of the positions of the bubbles.Comment: 4 pages, 1 figur

Jet energy measurement with the ATLAS detector in proton-proton collisions at root s=7 TeV

The jet energy scale and its systematic uncertainty are determined for jets measured with the ATLAS detector at the LHC in proton-proton collision data at a centre-of-mass energy of √s = 7TeV corresponding to an integrated luminosity of 38 pb-1. Jets are reconstructed with the anti-kt algorithm with distance parameters R=0. 4 or R=0. 6. Jet energy and angle corrections are determined from Monte Carlo simulations to calibrate jets with transverse momenta pT≥20 GeV and pseudorapidities {pipe}η{pipe}<4. 5. The jet energy systematic uncertainty is estimated using the single isolated hadron response measured in situ and in test-beams, exploiting the transverse momentum balance between central and forward jets in events with dijet topologies and studying systematic variations in Monte Carlo simulations. The jet energy uncertainty is less than 2. 5 % in the central calorimeter region ({pipe}η{pipe}<0. 8) for jets with 60≤pT<800 GeV, and is maximally 14 % for pT<30 GeV in the most forward region 3. 2≤{pipe}η{pipe}<4. 5. The jet energy is validated for jet transverse momenta up to 1 TeV to the level of a few percent using several in situ techniques by comparing a well-known reference such as the recoiling photon pT, the sum of the transverse momenta of tracks associated to the jet, or a system of low-pT jets recoiling against a high-pT jet. More sophisticated jet calibration schemes are presented based on calorimeter cell energy density weighting or hadronic properties of jets, aiming for an improved jet energy resolution and a reduced flavour dependence of the jet response. The systematic uncertainty of the jet energy determined from a combination of in situ techniques is consistent with the one derived from single hadron response measurements over a wide kinematic range. The nominal corrections and uncertainties are derived for isolated jets in an inclusive sample of high-pT jets. Special cases such as event topologies with close-by jets, or selections of samples with an enhanced content of jets originating from light quarks, heavy quarks or gluons are also discussed and the corresponding uncertainties are determined. © 2013 CERN for the benefit of the ATLAS collaboration

Quedas intra-hospitalares na Santa Casa de Belo Horizonte MG são adequadamente relatadas?

O envelhecimento populacional é uma realidade que chega imbuída de complicações as quais muitas vezes tornam-se problema de saúde pública, como é o caso das quedas hospitalares. Estas acarretam uma série de conseqüências negativas ao paciente e sua família, bem como ao sistema de saúde. O objetivo deste estudo foi avaliar e quantificar, por meio de entrevistas com os profissionais responsáveis pelos cuidados dos pacientes da Santa Casa de Belo Horizonte, a ocorrência de quedas durante a hospitalização. Foram entrevistados 37 profissionais (médicos, residentes, enfermeiros e prestadores de serviços) através de questionário semi-estruturado com 11 questões referentes ao histórico de quedas no setor, englobando informações sobre número de episódios, local, horário, idade do paciente, atividade que realizava no momento, conseqüências, bem como questões referentes à adaptação ambiental. A análise dos dados feita por meio de estatísticas descritivas. Os resultados mostraram que 65% dos funcionários relataram a ocorrência de quedas. A maioria dos caidores (73%) eram homens, com média de idade de 78,62 anos (DP +- 7,63) e caíram mais nos períodos da manhã (31%) e noite (31%), principalmente no quarto (48%) e no banheiro (42%) sendo que 50% dos episódios não foram injuriosos. Conclui-se que os episódios de quedas ocorrem no ambiente hospitalar, mas não são reportados de maneira adequada, tornando necessário adoção de medidas educativas aos profissionais que lidam com esta população.The Population ageing is a reality that comes gripped by complications related to aging, being in-hospital falls one of the most important, considering that they bring on a lot of negative consequences to the patient and his family as well as to the health system. The objective of this study was to assess and quantify, through the analyses of interviews with professionals responsible for the care of the patients at Santa Casa of Belo Horizonte, the occurrence of in-hospital falls. The interview was accomplished with 37 professionals(doctors, interns and nurses) through a semi-structured questionnaire which comprehended 11 questions related to the historical of falls in the sector, comprising information on the number of episodes, setting, time, patient age, activity performed at the moment, consequences, as well as questions regarding to environment adaptation. Data analysis conducted by means of descriptive statistics of the interviews showed that 65% of the employee reported the occurrence of falls. The majority (73%) of fallers was men, with mean age of 78, 62 years (SD +- 7, 63) and fell more in the morning (31%) and in the evening (31%), mainly in the room (48%) and in the bathroom (42%), being 50% of the episodes non-injurious. We conclude that falls episodes occur in the hospital setting, but are not reported adequately, showing the need of adoption of educational measures to the professional who deal with this population

Phytoremediation of heavy metal-contaminated sites: Eco-environmental concerns, field studies, sustainability issues and future prospects

Environmental contamination due to heavy metals (HMs) is of serious ecotoxicological concern worldwide because of their increasing use at industries. Due to non-biodegradable and persistent nature, HMs cause serious soil/water pollution and severe health hazards in living beings upon exposure. HMs can be genotoxic, carcinogenic, mutagenic, and teratogenic in nature even at low concentration. They may also act as endocrine disruptors and induce developmental as well as neurological disorders and thus, their removal from our natural environment is crucial for the rehabilitation of contaminated sites. To cope with HM pollution, phytoremediation has emerged as a low-cost and eco-sustainable solution to conventional physico-chemical cleanup methods that require high capital investment and labor alter soil properties and disturb soil microflora. Phytoremediation is a green technology wherein plants and associated microbes are used to remediate HM-contaminated sites to safeguard the environment and protect public health. Hence, in view of the above, the present paper aims to examine the feasibility of phytoremediation as a sustainable remediation technology for the management of metals-contaminated sites. Therefore, this paper provides an in-depth review on both the conventional and novel phytoremediation approaches, evaluate their efficacy to remove toxic metals from our natural environment, explore current scientific progresses, field experiences and sustainability issues and revise world over trends in phytoremediation research for its wider recognition and public acceptance as a sustainable remediation technology for the management of contaminated sites in 21st century