The role of IL-1 gene polymorphisms (IL1A, IL1B, and IL1RN) as a risk factor in unsuccessful implants retaining overdentures

Purpose: Implant-supported overdentures are an alternative predictable rehabilitation method that has a high impact on improving the patient's quality of life. However, some biological complications may interfere with the maintenance and survival of these overdenture implants. The goal of this article was to assess the factors that affect periimplant success, through a hypothetical prediction model for biological complications of implant overdentures.Methods: A retrospective observational, prevalence study was conducted in 58 edentulous Caucasian patients rehabilitated with implant overdentures. A total of 229 implants were included in the study. Anamnestic, clinical, and implant-related parameters were collected and recorded in a single database. "Patient" was chosen as the unit of analysis, and a complete screening protocol was established. The data analytical study included assessing the odds ratio, concerning the presence or absence of a particular risk factor, by using binary logistic regression modeling. Probability values (p values) inferior to 0.05 were considered as representing statistically significant evidence.Results: The performed prediction model included the following variables: mean probing depth, metal exposure, IL1B_allele2, maxillary edentulousness, and Fusobacterium nucleatum. The F. nucleatum showed significant association with the outcome. Introducing a negative coefficient appeared to prevent complications or even boost the biological defense when associated with other factors.Conclusions: The prediction model developed in this study could serve as a basis for further improved models that would assist clinicians in the daily diagnosis and treatment planning practice of oral rehabilitation with implant overdentures.info:eu-repo/semantics/publishedVersio

Data from: Genetic and morphometric evidence for the recognition of several recently synonymized species of trans-Andean Rhamdia (Pisces: Siluriformes: Heptapteridae)

A recent taxonomic revision of the Neotropical catfish genus Rhamdia (Pisces: Siluriformes: Heptapteridae) reduced a number of described species to synonymy, especially under a broadly circumscribed R. quelen. Evidence is presented here from DNA sequence data, external morphology, and morphometrics that argues for the recognition of R. guatemalensis in Central and northern South America and R. saijaensis and R. cinerascens in the Pacific drainages of Colombia and Ecuador, respectively. The DNA data indicate that all trans-Andean samples form a monophyletic group, within which there are separate clades corresponding to R. laticauda and the synonymized R. guatemalensis, R. saijaensis, and R. cinerascens. The morphometric data substantiate the phylogenetic groupings, and in external morphology, each putative species has diagnostic characters. Rhamdia guatemalensis is characterized by insertion of the adipose fin closer to the dorsal fin than to the caudal fin and presence of a conspicuous lateral longitudinal dark band; R. saijaensis is characterized by a small head with head length 20.8–23.4% of standard length and by lacking a lateral longitudinal band; and R. cinerascens is characterized by a large head with head length 25.8–30.1% of standard length, base of the adipose fin 30.3–33.3% of standard length, outer mental barbels extending to the base of the pectoral rays, and presence of a faint lateral longitudinal band. The external morphological differences and phylogenetic relationships indicate that these groups are both recognizable and represent independent lineages, which argue for their recognition as species

Appendix 2. Most likely tree from ML analysis of Rhamdia mt cytb data

Maximum likelihood analysis of Rhamdia mitochondrial cyt b data. Most likely tree (highest –ln score) of four replications with bootstrap support values. Three of the four replicates resulted in the same topology, best tree with –ln likelihood = –9147.8963

Data from: Genetic and morphometric evidence for the recognition of several recently synonymized species of trans-Andean Rhamdia (Pisces: Siluriformes: Heptapteridae)

A recent taxonomic revision of the Neotropical catfish genus Rhamdia (Pisces: Siluriformes: Heptapteridae) reduced a number of described species to synonymy, especially under a broadly circumscribed R. quelen. Evidence is presented here from DNA sequence data, external morphology, and morphometrics that argues for the recognition of R. guatemalensis in Central and northern South America and R. saijaensis and R. cinerascens in the Pacific drainages of Colombia and Ecuador, respectively. The DNA data indicate that all trans-Andean samples form a monophyletic group, within which there are separate clades corresponding to R. laticauda and the synonymized R. guatemalensis, R. saijaensis, and R. cinerascens. The morphometric data substantiate the phylogenetic groupings, and in external morphology, each putative species has diagnostic characters. Rhamdia guatemalensis is characterized by insertion of the adipose fin closer to the dorsal fin than to the caudal fin and presence of a conspicuous lateral longitudinal dark band; R. saijaensis is characterized by a small head with head length 20.8–23.4% of standard length and by lacking a lateral longitudinal band; and R. cinerascens is characterized by a large head with head length 25.8–30.1% of standard length, base of the adipose fin 30.3–33.3% of standard length, outer mental barbels extending to the base of the pectoral rays, and presence of a faint lateral longitudinal band. The external morphological differences and phylogenetic relationships indicate that these groups are both recognizable and represent independent lineages, which argue for their recognition as species

Rhamdia raw morphometrics data

Rhamdia raw morphometrics data in Excel (.xlsx) forma

Appendix 3. Divergence times estimates of Rhamdia species.

Divergence time estimates chronogram from BEAST for several Rhamdia species. Values on branches represent posterior probabilities. Bars correspond to 95% HPD intervals. Stars show calibration points

Rhamdia Nexus File with Bayesian Analysis Block

Nexus (.nxs, .nex) file for Bayesian analysis using MrBayes. Bayesian block included

Rhamdia Parsimony or Maximum Likelihood Nexus File

A nexus (.nxs, .nex) file for use in parsimony and maximum likelihood analyse

Rhamdia Parsimony Matrix

WinClada (.winc) file of 117 Rhamdia individuals for parsimony analysi