Infectious bronchitis virus infections of chickens in Belgium : an epidemiological survey

Between April 2012 and July 2015, cloacal and/or tracheal swab samples were collected from four hundred and twenty-four Belgian chicken broiler, breeder and layer flocks. All flocks were kept for production purposes and presented clinical signs suggestive of an infectious bronchitis virus (IBV) infection. The samples were analyzed by real-time polymerase chain reaction (RT-qPCR) to detect the presence of ribonucleic acid (RNA) of IBV. When positive, approximately four hundred base pairs (bp) encoding for the hypervariable region of the IBV S1 protein were sequenced. Sequencing results, cycle threshold (Ct) values and vaccination history were used as criteria to try and distinguish vaccine strains from field strains. Of all samples examined, 22.4% was negative. In 16.4% of the samples that did contain RNA from IBV, the genotype could not be determined. In most cases, this was due to the recovery of RNA quantities below the lower limit of detection of the sequencing PCR. The remaining positive submissions predominantly revealed RNA from IBV strains that belonged to the 4/91-793B (46.8%), D388-QX (25.2%), D274-D207 (5.8%) and Massachusetts (4.0%) genotypes. Estimations indicated that approximately 58%, 11%, 37% and 46% of these detections, respectively, were vaccine strains. Infections with types CK/CH/Guandong/Xindadi/0903, Ukr/27/2011, NGA/295/2006 and Q1 were observed sporadically. The results indicate that IBV infections are highly prevalent in Belgian chickens and that at least eight different IBV types were circulating during the monitored period. This underlines the necessity of providing flocks with a strong and broad protective immunity against IBV

Polarization-Tailored Raman Frequency Conversion in Chiral Gas-Filled Hollow Core Photonic Crystal Fibers

Broadband-tunable sources of circularly-polarized light are crucial in fields such as laser science, biomedicine and spectroscopy. Conventional sources rely on nonlinear wavelength conversion and polarization control using standard optical components, and are limited by the availability of suitably transparent crystals and glasses. Although gas-filled hollow-core photonic crystal fiber provides pressure-tunable dispersion, long well-controlled optical path-lengths, and high Raman conversion efficiency, it is unable to preserve circular polarization state, typically exhibiting weak linear birefringence. Here we report a revolutionary approach based on helically-twisted hollow-core photonic crystal fiber, which displays circular birefringence, thus robustly maintaining circular polarization state against external perturbations. This makes it possible to generate pure circularly-polarized Stokes and anti-Stokes signals by rotational Raman scattering in hydrogen. The polarization state of the frequency-shifted Raman bands can be continuously varied by tuning the gas pressure in the vicinity of the gain suppression point. The results pave the way to a new generation of compact and efficient fiber-based sources of broadband light with fully-controllable polarization state.Comment: 5 pages, 4 figure

High quality MgB2 thin films in-situ grown by dc magnetron sputtering

Thin films of the recently discovered magnesium diboride (MgB2) intermetalic superconducting compound have been grown using a magnetron sputtering deposition technique followed by in-situ annealing at 830 C. High quality films were obtained on both sapphire and MgO substrates. The best films showed maximum Tc = 35 K (onset), a transition width of 0.5 K, a residual resistivity ratio up to 1.6, a low temperature critical current density Jc > 1 MA/cm2 and anisotropic critical field with gamma = 2.5 close to the values obtained for single crystals. The preparation technique can be easily scaled to produce large area in-situ films.Comment: 7 pages, 4 figure

Leading order analysis of neutrino induced dimuon events in the CHORUS experiment

We present a leading order QCD analysis of a sample of neutrino induced charged-current events with two muons in the final state originating in the lead-scintillating fibre calorimeter of the CHORUS detector. The results are based on a sample of 8910 neutrino and 430 antineutrino induced opposite-sign dimuon events collected during the exposure of the detector to the CERN Wide Band Neutrino Beam between 1995 and 1998. % with $E_{\mu 1},E_{\mu 2} > 5$ GeV and $Q^2 > 3$ GeV$^2$ collected %between 1995 and 1998. The analysis yields a value of the charm quark mass of \mc = (1.26\pm 0.16 \pm 0.09) \GeVcc and a value of the ratio of the strange to non-strange sea in the nucleon of $\kappa = 0.33 \pm 0.05 \pm 0.05$, improving the results obtained in similar analyses by previous experiments.Comment: Submitted to Nuclear Physics

Two time constants for the binding of proteins to DNA from micromechanical data

Recent experimental advances allow the direct measurement of the force/extension behavior for DNA in the presence of strongly binding proteins. Such experiments reveal information about the cooperative mechanism of protein binding. We have studied the irreversible binding of such proteins to DNA using a simple simulation and present a method for estimating quantitative rate constants for the nucleation and growth of linear domains of proteins bound to DNA. Such rate constants also give information about the relative energetics of the two binding processes. We discuss our results in the context of recent data for the DNA-recA-ATPγs system, for which the nucleation time is 4.7 × 104 min per recA binding site and the total growth rate of each domain is 1400 recA/min

Currently available tools and strategies for emergency vaccination in case of avian influenza

Recent epidemics of highly contagious animal diseases included in the list A of the OIE such as foot-and-mouth disease, classical swine fever and avian influenza (AI) have led to the implementation of stamping-out policies resulting in the depopulation of millions of animals. The enforcement of a control strategy based on culling of animals that are infected, suspected of being infected or suspected of being contaminated, which is based only on the application of sanitary restrictions on farms, may not be sufficient to avoid the spread of infection, particularly in areas that have high animal densities, thus resulting in mass depopulation. In the European Union, the directive that imposes the enforcement of a stampingout policy (92/40/EC) for AI was adopted in 1992 but was drafted in the 1980s. The poultry industry has undergone substantial changes in the last twenty years, mainly resulting in shorter production cycles and greater animal densities per territorial unit. Due to these organizational changes, infectious diseases are significantly more difficult to control as a result of the greater number of susceptible animals reared per given unit of time and the difficulties in applying adequate biosecurity measures. The slaughter and destruction of great numbers of animals is also questionable from an ethical point of view, particularly when human-health implications are negligible. For this reason, mass depopulation has raised serious concerns for the general public and has recently led to very high costs and economic losses for the national and federal governments, the stakeholders and ultimately for the consumers. In the past, the use of vaccines in such emergencies has been limited by the impossibility of differentiating vaccinated/infected from vaccinated/non-infected animals. The major concern was that through trade or movement of apparently uninfected animals or products, the disease could spread further or might be exported to other countries. For this reason export bans have been imposed on countries enforcing a vaccination policy. This paper takes into account the possible strategies for the control of avian influenza infections, bearing in mind the new proposed definition of AI. In detail, an overview of the advantages and disadvantages of using conventional inactivated (homologous and heterologous) vaccines and recombinant vaccines is presented and discussed. Reference is made to the different control strategies including the restriction measures to be applied in case of the enforcement of a vaccination policy. In addition, the implications of a vaccination policy on trade are discussed. In conclusion, if vaccination is accepted as an option for the control of AI, vaccine banks including companion diagnostic tests must be established and made available for immediate use

unreinforced masonry buildings

A recent earthquake of M=4.9 occurred on 29 October 2007 in C, ameli, Denizli, which is located in a seismically active region at southwest Anatolia, Turkey. It has caused extensive damages at unreinforced masonry buildings like many other cases observed in Turkey during other previous earthquakes. Most of the damaged structures were non-engineered, seismically deficient, unreinforced masonry buildings. This paper presents a site survey of these damaged buildings. In addition to typical masonry damages, some infrequent, event-specific damages were also observed. Reasons for the relatively wide spread damages considering the magnitude of the event are discussed in the paper