COMMFISH: all about Alaska's commercial fisheries collections

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Indicative analysis of the injury level at production

Визначені основні групи оцінювання травматизму: профілактика виробничого травматизму, професійної захворюваності, втрата працездатності; поліпшення умов і охорони праці; забезпечення контролю та нагляду за станом умов та охорони праці; оцінка професійних та соціальних ризиків; інформаційне та економічне забезпечення охорони праці. Розглянуті нові показники, що дають змогу провести більш повний аналіз травматизму на виробництві. Проаналізовано категорійний апарат “показник”, “індикатор”.The basic groups of injuries were evaluated: prevention of industrial injuries, occupational diseases, disability; improvement of conditions and safety; control and monitoring of the condition of safety; evaluation of professional and social risks; provide informational and economic support of safety. Considered new indicators which allow to conduct a more complete analysis of accidents at production. Analyzed categorical apparatus "index", "indicator".Определены основные группы оценивания травматизма: профилактика производственного травматизма, профессиональной заболеваемости, потеря трудоспособности; улучшение условий и охраны труда; обеспечение контроля и надзора за состоянием условий и охраны труда; оценка профессиональных и социальных рисков; информационное и экономическое обеспечение охраны труда. Рассмотрены новые показатели, позволяющие провести более полный анализ травматизма на производстве. Проанализирован аппарат категорий "показатель", "индикатор"

Attosecond time-resolved photoelectron holography

Ultrafast strong-field physics provides insight into quantum phenomena that evolve on an attosecond time scale, the most fundamental of which is quantum tunneling. The tunneling process initiates a range of strong field phenomena such as high harmonic generation (HHG), laser-induced electron diffraction, double ionization and photoelectron holography—all evolving during a fraction of the optical cycle. Here we apply attosecond photoelectron holography as a method to resolve the temporal properties of the tunneling process. Adding a weak second harmonic (SH) field to a strong fundamental laser field enables us to reconstruct the ionization times of photoelectrons that play a role in the formation of a photoelectron hologram with attosecond precision. We decouple the contributions of the two arms of the hologram and resolve the subtle differences in their ionization times, separated by only a few tens of attoseconds

Temporal variation in pollination services to Cucurbita moschata is determined by bee gender and diversity

It has been proposed that species-rich insect communities and species turnover across landscapes enhance the pollination efficiency of crops through complementarity, where both the dominant and less abundant species contribute to reaching a yield threshold from pollination. Alternatively, fluctuations in the most abundant pollinator species, rather than changes in species richness, may drive temporal variation in pollination services. In this study, we used Cucurbita moschata as a model to investigate temporal variation in pollinator communities in a Mexican tropical dry forest region. We sampled floral visitors in the coastal region of Jalisco during the wet and dry seasons and determined the pollination efficiency of all floral visitors. Our results showed that there was temporal variation in the pollinator community and in the pollination efficiency of the main pollinators of Cucurbita moschata crops. In the wet season, native bees of the genus Peponapis were the most frequent and effective pollinators of C. moschata, whereas in the dry season, Peponapis bees were scarce and Apis mellifera became the most frequent floral visitor. Apis mellifera transfers smaller pollen loads than Peponapis, but it provides an effective pollination service in conjunction with other native bees during the dry season. There was also an interaction between flower gender and pollinator species, where A. mellifera had higher visitation rate to female C. moschata flowers, and Peponapis bees to staminate flowers. Mean visitation rate by Peponapis female bees was 17 times higher than visitation rate by male bees. This is the first report of a vis-à-vis relationship of pollinator gender with respect to plant gender in which plants of the genus Cucurbita that produce unisexual staminate and pistillate flowers are differentially visited by Peponapis male and female bees, where females are the main pollinators. Understanding the temporal variation in pollinator communities and the contribution of the different species of pollinators to the reproductive success of different crop species and varieties can be crucial to maintaining pollination services under the current global pollination crisis.Fil: Delgado-Carrillo, Oliverio. Laboratorio Nacional de Análisis y Síntesis Ecológica; México. Universidad Nacional Autónoma de México; MéxicoFil: Martén-Rodríguez, Silvana. Laboratorio Nacional de Análisis y Síntesis Ecológica; MéxicoFil: Ashworth, Lorena. Laboratorio Nacional de Análisis y Síntesis Ecológica; México. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto Multidisciplinario de Biología Vegetal. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales. Instituto Multidisciplinario de Biología Vegetal; ArgentinaFil: Aguilar, Ramiro. Laboratorio Nacional de Análisis y Síntesis Ecológica; México. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto Multidisciplinario de Biología Vegetal. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales. Instituto Multidisciplinario de Biología Vegetal; ArgentinaFil: Lopezaraiza-Mikel, Martha. Universidad Autonoma de Guerrero; MéxicoFil: Quesada, Mauricio. Laboratorio Nacional de Análisis y Síntesis Ecológica; Méxic

CapsID: a web-based tool for developing parsimonious sets of CAPS molecular markers for genotyping

BACKGROUND: Genotyping may be carried out by a number of different methods including direct sequencing and polymorphism analysis. For a number of reasons, PCR-based polymorphism analysis may be desirable, owing to the fact that only small amounts of genetic material are required, and that the costs are low. One popular and cheap method for detecting polymorphisms is by using cleaved amplified polymorphic sequence, or CAPS, molecular markers. These are also known as PCR-RFLP markers. RESULTS: We have developed a program, called CapsID, that identifies snip-SNPs (single nucleotide polymorphisms that alter restriction endonuclease cut sites) within a set or sets of reference sequences, designs PCR primers around these, and then suggests the most parsimonious combination of markers for genotyping any individual who is not a member of the reference set. The output page includes biologist-friendly features, such as images of virtual gels to assist in genotyping efforts. CapsID is freely available at . CONCLUSION: CapsID is a tool that can rapidly provide minimal sets of CAPS markers for molecular identification purposes for any biologist working in genetics, community genetics, plant and animal breeding, forensics and other fields

High dietary folate in pregnant mice leads to pseudo-MTHFR deficiency and altered methyl metabolism, with embryonic growth delay and short-term memory impairment in offspring

Methylenetetrahydrofolate reductase (MTHFR) generates methyltetrahydrofolate for methylation reactions. Severe MTHFR deficiency results in homocystinuria and neurologic impairment. Mild MTHFR deficiency (677C > T polymorphism) increases risk for complex traits, including neuropsychiatric disorders. Although low dietary folate impacts brain development, recent concerns have focused on high folate intake following food fortification and increased vitamin use. Our goal was to determine whether high dietary folate during pregnancy affects brain development in murine offspring. Female mice were placed on control diet (CD) or folic acid-supplemented diet (FASD) throughout mating, pregnancy and lactation. Three-week-old male pups were evaluated for motor and cognitive function. Tissues from E17.5 embryos, pups and dams were collected for choline/methyl metabolite measurements, immunoblotting or gene expression of relevant enzymes. Brains were examined for morphology of hippocampus and cortex. Pups of FASD mothers displayed short-term memory impairment, decreased hippocampal size and decreased thickness of the dentate gyrus. MTHFR protein levels were reduced in FASD pup livers, with lower concentrations of phosphocholine and glycerophosphocholine in liver and hippocampus, respectively. FASD pup brains showed evidence of altered acetylcholine availability and Dnmt3a mRNA was reduced in cortex and hippocampus. E17.5 embryos and placentas from FASD dams were smaller. MTHFR protein and mRNA were reduced in embryonic liver, with lower concentrations of choline, betaine and phosphocholine. Embryonic brain displayed altered development of cortical layers. In summary, high folate intake during pregnancy leads to pseudo-MTHFR deficiency, disturbed choline/methyl metabolism, embryonic growth delay and memory impairment in offspring. These findings highlight the unintended negative consequences of supplemental folic acid

Effect of diet supplementation with live yeast Saccharomyces cerevisiae on growth performance, caecal ecosystem and health of growing rabbits

[EN] The aim of this study was to determine the effect of the live yeast Saccharomyces cerevisiae on the growth performance, caecal ecosystem and overall health of growing rabbits. A control diet was formulated (crude protein: 15.9%; neutral detergent fibre: 31.6%) and another diet obtained by supplementing the control diet with 1 g of Saccharomyces cerevisiae (6.5×109 colony-forming units) per kg of diet. Ninety 35-d old rabbits were allotted into 3 groups: TT (rabbits offered the supplemented diet from 17 d of age onwards), CT (rabbits offered supplemented diet from 35 d) and CC (rabbits fed non-supplemented diet). Body weight (BW) and feed intake were measured weekly and mortality was controlled daily. At 35, 42 and 77 d of age, 6 rabbits from each group were slaughtered and digestive physiological traits, serum clinical chemistry parameters, fermentation traits, and the composition of caecal microbiota examined. At 42 and 56 d of age, 10 rabbits from each group were injected intraperitoneally with 100 μg/animal of ovalbumin and blood samples were collected for examination of plasma immunological parameters. Throughout the experiment (5-11 wk), weight gain and feed intake (37.8 and 112.6 g/d, on av.) were not affected by yeast, except for weight gain in the first week after weaning, which was the highest in TT animals among the 3 groups (48.1 vs. 43.9 and 44.2 g/d for TT, CC and CT, respectively; P=0.012). This may be due to the increased trend in feed intake (P=0.072) in the TT group (96.4 g/d) compared to the others. Mortality (5/90) was low and did not differ among the 3 groups. Treatments had no effect on slaughter traits at the 3 sampling dates (35, 42 and 77 d). Only the weight of the empty caecum (% BW) was higher (P=0.02) in CC (2.2%) and CT (2.3%) than in TT group (1.8%) at 77 d of age. Treatments did not overtly affect the caecal microbiota, although the number of total anaerobic bacteria and Bacteroides were lower (108 and 107/g caecal digesta, respectively) in rabbits from CC group compared to those of CT and TT groups at 42 d of age (P=0.03). No difference between groups was observed for caecal short chain fatty acids profile, blood traits, or IgG and cytokine profile. In conclusion, supplementation of feed with yeast did not modify growth traits and resulted in only a temporary increase in weight gain and a slightly altered caecal microbiota after weaning.Belhassen, T.; Bonai, A.; Gerencsér, Z.; Matics, Z.; Tuboly, T.; Bergaoui, R.; Kovacs, M. (2016). Effect of diet supplementation with live yeast Saccharomyces cerevisiae on growth performance, caecal ecosystem and health of growing rabbits. World Rabbit Science. 24(3):191-200. doi:10.4995/wrs.2016.3991.SWORD19120024

Differences in genotype and virulence among four multidrug-resistant <i>Streptococcus pneumoniae</i> isolates belonging to the PMEN1 clone

We report on the comparative genomics and characterization of the virulence phenotypes of four &lt;i&gt;S. pneumoniae&lt;/i&gt; strains that belong to the multidrug resistant clone PMEN1 (Spain&lt;sup&gt;23F&lt;/sup&gt; ST81). Strains SV35-T23 and SV36-T3 were recovered in 1996 from the nasopharynx of patients at an AIDS hospice in New York. Strain SV36-T3 expressed capsule type 3 which is unusual for this clone and represents the product of an in vivo capsular switch event. A third PMEN1 isolate - PN4595-T23 - was recovered in 1996 from the nasopharynx of a child attending day care in Portugal, and a fourth strain - ATCC700669 - was originally isolated from a patient with pneumococcal disease in Spain in 1984. We compared the genomes among four PMEN1 strains and 47 previously sequenced pneumococcal isolates for gene possession differences and allelic variations within core genes. In contrast to the 47 strains - representing a variety of clonal types - the four PMEN1 strains grouped closely together, demonstrating high genomic conservation within this lineage relative to the rest of the species. In the four PMEN1 strains allelic and gene possession differences were clustered into 18 genomic regions including the capsule, the blp bacteriocins, erythromycin resistance, the MM1-2008 prophage and multiple cell wall anchored proteins. In spite of their genomic similarity, the high resolution chinchilla model was able to detect variations in virulence properties of the PMEN1 strains highlighting how small genic or allelic variation can lead to significant changes in pathogenicity and making this set of strains ideal for the identification of novel virulence determinant

Differences between <i>Trypanosoma brucei gambiense</i> groups 1 and 2 in their resistance to killing by Trypanolytic factor 1

&lt;p&gt;&lt;b&gt;Background:&lt;/b&gt; The three sub-species of &lt;i&gt;Trypanosoma brucei&lt;/i&gt; are important pathogens of sub-Saharan Africa. &lt;i&gt;T. b. brucei&lt;/i&gt; is unable to infect humans due to sensitivity to trypanosome lytic factors (TLF) 1 and 2 found in human serum. &lt;i&gt;T. b. rhodesiense&lt;/i&gt; and &lt;i&gt;T. b. gambiense&lt;/i&gt; are able to resist lysis by TLF. There are two distinct sub-groups of &lt;i&gt;T. b. gambiense&lt;/i&gt; that differ genetically and by human serum resistance phenotypes. Group 1 &lt;i&gt;T. b. gambiense&lt;/i&gt; have an invariant phenotype whereas group 2 show variable resistance. Previous data indicated that group 1 &lt;i&gt;T. b. gambiense&lt;/i&gt; are resistant to TLF-1 due in-part to reduced uptake of TLF-1 mediated by reduced expression of the TLF-1 receptor (the haptoglobin-hemoglobin receptor (&lt;i&gt;HpHbR&lt;/i&gt;)) gene. Here we investigate if this is also true in group 2 parasites.&lt;/p&gt; &lt;p&gt;&lt;b&gt;Methodology:&lt;/b&gt; Isogenic resistant and sensitive group 2 &lt;i&gt;T. b. gambiense&lt;/i&gt; were derived and compared to other T. brucei parasites. Both resistant and sensitive lines express the &lt;i&gt;HpHbR&lt;/i&gt; gene at similar levels and internalized fluorescently labeled TLF-1 similar fashion to &lt;i&gt;T. b. brucei&lt;/i&gt;. Both resistant and sensitive group 2, as well as group 1 &lt;i&gt;T. b. gambiense&lt;/i&gt;, internalize recombinant APOL1, but only sensitive group 2 parasites are lysed.&lt;/p&gt; &lt;p&gt;&lt;b&gt;Conclusions:&lt;/b&gt; Our data indicate that, despite group 1 &lt;i&gt;T. b. gambiense&lt;/i&gt; avoiding TLF-1, it is resistant to the main lytic component, APOL1. Similarly group 2 &lt;i&gt;T. b. gambiense&lt;/i&gt; is innately resistant to APOL1, which could be based on the same mechanism. However, group 2 &lt;i&gt;T. b. gambiense&lt;/i&gt; variably displays this phenotype and expression does not appear to correlate with a change in expression site or expression of &lt;i&gt;HpHbR&lt;/i&gt;. Thus there are differences in the mechanism of human serum resistance between &lt;i&gt;T. b. gambiense&lt;/i&gt; groups 1 and 2.&lt;/p&gt