Genome sequence of Acetomicrobium hydrogeniformans OS1

Acetomicrobium hydrogeniformans, an obligate anaerobe of the phylum Synergistetes, was isolated from oil production water. It has the unusual ability to produce almost 4 molecules H2/molecule glucose. The draft genome of A. hydrogeniformans OS1 (DSM 22491T) is 2,123,925 bp, with 2,068 coding sequences and 60 RNA genes

Creep of (La0.55Sr0.45)0.99Mn1-yGayO3

Steady-state compressive creep was measured in (La0.55Sr0.45)0.99Mn1−yGayO3 at temperatures from 1200 to 1270 °C in air at stresses (σ) from 13 to 40 MPa. The Ga concentration was y = 0, 0.05, and 0.10. Strains to 0.14 were obtained. In the creep equation for strain rate, = An exp(−Q/RT), stress exponents (n) were between 1.3 and 1.7, indicating that diffusional flow is the dominant creep mechanism, and the activation energy (Q) was found to vary from 355 kJ mol−1 for y = 0 to 485 kJ mol−1 for y = 0.10

Use of mobile technology-based participatory mapping approaches to geolocate health facility attendees for disease surveillance in low resource settings.

BACKGROUND: Identifying fine-scale spatial patterns of disease is essential for effective disease control and elimination programmes. In low resource areas without formal addresses, novel strategies are needed to locate residences of individuals attending health facilities in order to efficiently map disease patterns. We aimed to assess the use of Android tablet-based applications containing high resolution maps to geolocate individual residences, whilst comparing the functionality, usability and cost of three software packages designed to collect spatial information. RESULTS: Using Open Data Kit GeoODK, we designed and piloted an electronic questionnaire for rolling cross sectional surveys of health facility attendees as part of a malaria elimination campaign in two predominantly rural sites in the Rizal, Palawan, the Philippines and Kulon Progo Regency, Yogyakarta, Indonesia. The majority of health workers were able to use the tablets effectively, including locating participant households on electronic maps. For all households sampled (n = 603), health facility workers were able to retrospectively find the participant household using the Global Positioning System (GPS) coordinates and data collected by tablet computers. Median distance between actual house locations and points collected on the tablet was 116 m (IQR 42-368) in Rizal and 493 m (IQR 258-886) in Kulon Progo Regency. Accuracy varied between health facilities and decreased in less populated areas with fewer prominent landmarks. CONCLUSIONS: Results demonstrate the utility of this approach to develop real-time high-resolution maps of disease in resource-poor environments. This method provides an attractive approach for quickly obtaining spatial information on individuals presenting at health facilities in resource poor areas where formal addresses are unavailable and internet connectivity is limited. Further research is needed on how to integrate these with other health data management systems and implement in a wider operational context

Numerical Modeling of Evanescent-Wave Atom Optics

We numerically solve the time-dependent Schrodinger equation for a two-level atom interacting with an evanescent light field. The atom may be reflected or diffracted. Using the experimental parameter values we quantitatively model the evanescent field dopplerons (velocity-tuned resonances) observed by Stenlake et al. [Phys. Rev. A 49, 16 (1994)]. Besides successfully modeling the experiment, our approach provides complementary insights to the usual solution of the time-independent Schrodinger equation. We neglect spontaneous emission

The Importance of Hormesis to Public Health

BACKGROUND: Hormesis is a specific type of nonmonotonic dose response whose occurrence has been documented across a broad range of biological models, diverse types of exposure, and a variety of outcomes. The effects that occur at various points along this curve can be interpreted as beneficial or detrimental, depending on the biological or ecologic context in which they occur. OBJECTIVE: Because hormesis appears to be a relatively common phenomenon that has not yet been incorporated into regulatory practice, the objective of this commentary is to explore some of its more obvious public health and risk assessment implications, with particular reference to issues raised recently within this journal by other authors. DISCUSSION: Hormesis appears to be more common than dose–response curves that are currently used in the risk assessment process [e.g., linear no-threshold (LNT)]. Although a number of mechanisms have been identified that explain many hormetic dose–response relationships, better understanding of this phenomenon will likely lead to different strategies not only for the prevention and treatment of disease but also for the promotion of improved public health as it relates to both specific and more holistic health outcomes. CONCLUSIONS: We believe that ignoring hormesis is poor policy because it ignores knowledge that could be used to improve public health

Exploring the epistemic politics of urban niche experiments

Urban experiments have been initiated in several locations to purposively initiate and shape transitions to more sustainable urban socio-technical systems, e.g. for energy, water, mobility. Although knowledges produced within such learning spaces are often presented as logical, technical and rational (Vanolo, 2013 ; Kitchin, 2014), the actors and mechanisms which shape decisions are far from obvious, involving cultures, power relations and multiple logics that are profoundly political (Machin, 2013). This research presents a case study founded in a phronetic perspective (Flyvbjerg, 2001; Avelino and Grin, 2017), unpacking the epistemological politics of an urban experiment taking place within a ‘smart city’ programme. A ‘smart transport’ application for mobile phones, ‘MotionMap’ was developed to transform the mobility system of Milton Keynes, an expanding city located 80 km to the north of London, UK. The case study recognises power relations and reveals how various actors engaged in the development of this application have further rendered the MK mobility socio-technical system an object of urban governance

Quantitative PCR reveals strong spatial and temporal variation of the wasting disease pathogen, Labyrinthula zosterae in northern European eelgrass (Zostera marina) beds

Seagrass beds are the foundation species of functionally important coastal ecosystems worldwide. The world’s largest losses of the widespread seagrass Zostera marina (eelgrass) have been reported as a consequence of wasting disease, an infection with the endophytic protist Labyrinthula zosterae. During one of the most extended epidemics in the marine realm, ~90% of East and Western Atlantic eelgrass beds died-off between 1932 and 1934. Today, small outbreaks continue to be reported, but the current extent of L. zosterae in European meadows is completely unknown. In this study we quantify the abundance and prevalence of the wasting disease pathogen among 19 Z. marina populations in northern European coastal waters, using quantitative PCR (QPCR) with primers targeting a species specific portion of the internally transcribed spacer (ITS1) of L. zosterae. Spatially, we found marked variation among sites with abundances varying between 0 and 126 cells mg−1 Z. marina dry weight (mean: 5.7 L. zosterae cells mg−1 Z. marina dry weight ±1.9 SE) and prevalences ranged from 0–88.9%. Temporarily, abundances varied between 0 and 271 cells mg−1 Z. marina dry weight (mean: 8.5±2.6 SE), while prevalences ranged from zero in winter and early spring to 96% in summer. Field concentrations accessed via bulk DNA extraction and subsequent QPCR correlated well with prevalence data estimated via isolation and cultivation from live plant tissue. L. zosterae was not only detectable in black lesions, a sign of Labyrinthula-induced necrosis, but also occurred in green, apparently healthy tissue. We conclude that L. zosterae infection is common (84% infected populations) in (northern) European eelgrass populations with highest abundances during the summer months. In the light of global climate change and increasing rate of marine diseases our data provide a baseline for further studies on the causes of pathogenic outbreaks of L. zosterae