1,037 research outputs found

    Superoxide Flashes in Mouse Skeletal Muscle Are Produced by Discrete Arrays of Active Mitochondria Operating Coherently

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    Reactive Oxygen Species (ROS) constitute important intracellular signaling molecules. Mitochondria are admitted sources of ROS, especially of superoxide anions through the electron transport chain. Here the mitochondria-targeted ratiometric pericam (RPmt) was used as a superoxide biosensor, by appropriate choice of the excitation wavelength. RPmt was transfected in vivo into mouse muscles. Confocal imaging of isolated muscle fibers reveals spontaneous flashes of RPmt fluorescence. Flashes correspond to increases in superoxide production, as shown by simultaneous recordings of the fluorescence from MitoSox, a mitochondrial superoxide probe. Flashes occur in all subcellular populations of mitochondria. Spatial analysis of the flashes pattern over time revealed that arrays of mitochondria work as well-defined superoxide-production-units. Increase of superoxide production at the muscle fiber level involves recruitment of supplemental units with no increase in per-unit production. Altogether, these results demonstrate that superoxide flashes in muscle fibers correspond to physiological signals linked to mitochondrial metabolism. They also suggest that superoxide, or one of its derivatives, modulates its own production at the mitochondrial level

    Potentiality of Using Spreading Sargassum Species From Indonesia as an Interesting Source of Antibacterial and Radical Scavenging Compounds: a Preliminary Study

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    As an archipelagic country with 95,181 km long coastline, Indonesia has great potential as the producer of seaweeds. The diverse phyla of marine macroalgae (red, brown and green seaweeds) are known to produce molecules which are attractive for diverse industries. Applications of algal products range from simple biomass production for food, feed and fuels to valuable products such as sugar polymers, cosmetics, pharmaceuticals, pigments, and food supplements. Seaweeds also have the potential to be used as a source of new bioactive for human, animal or plant health, as well as a source of new synthons and biocatalysts in sustainable chemistry (Bourgougnon and Stiger-Pouvreau, 2011). In this paper, among species of economic value we focus on brown seaweeds belonging to family Sargassaceae and genus Sargassum spreading along Indonesian coasts. Members of this genus are especially abundant in tropical and subtropical regions (Zemke-White and Ohno, 1999). The purpose of this study is to analyze the antibacterial and antioxidant activity of three species of Sargassum, i.e. S. echinocarpum, S. duplicatum and S. polycystum. Both polar and non-polar extracts have been prepared from those three species. In vitro antibacterial activities of extracts were evaluated against Gram-positive bacteria Staphylococcus aureus and Gram-negative bacteria Escherichia coli. Results indicated all the three species tested showed an antibacterial activity. The most effective antibacterial activity against S. aerous was from S. echinocarpum with ethil asetat, inhibition zone 1.13 ± 0.25 mm; S. duplicatum with N-Hexane was most effective against E. coli, 1.20 ± 0.28 mm

    Nanoindentation cracking in gallium arsenide: Part I. In situ SEM nanoindentation

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    The nanoindentation fracture behavior of gallium arsenide (GaAs) is examined from two perspectives in two parent papers. The first paper (part I) focuses on in situ nanoindentation within a scanning electron microscope (SEM) and on fractographic observations of cleaved cross-sections of indented regions to investigate the crack field under various indenter geometries. In the second parent paper (part II), cathodoluminescence and transmission electron microscopy are used to investigate the relationship between dislocation and crack fields. The combination of instrumented in situ scanning electron microscopy nanoindentations and cleavage cross-sectioning allows us to establish a detailed map of cracking in the indented region and cracking kinetics for conical and wedge indenter shapes. For wedge nanoindentations, the evolution of the half-penny crack size with the indentation load is interpreted using a simple linear elastic fracture model based on weight functions. Fracture toughness estimates obtained by this technique fall within the range of usual values quoted for GaA

    Extension of high temporal resolution sea level time series at Socoa (Saint Jean-de-Luz, France) back to 1875

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    In this data paper sea level time series at Socoa (Saint Jean-de-Luz, Southwestern France) is extended in a data archaeology exercise. We have catalogued water level records stored in ledgers and charts, as well as other associated documents (metadata) in thorough research of national and local archives. An extensive effort was made to rescue these documents by archiving them in digital formats. Based on this large set of rescued documents, the Socoa time series is further extended back in time by about 40 years, at hourly (for ledgers) to 5-minutes (for charts) sampling. Analysis of the precise levelling information reveals that the datum of the tide gauge site has been stable. We assessed the consistency of this new century-long time series based on nearby tide gauge data. Although the overall timeseries is generally consistent, siltation is found to be a recurrent problem of the stilling well which impacted some part of the extended data. However, being a high temporal resolution sea level time series spanning more than 100 years, this new dataset will be useful for advancing climate research, particularly the decadal scale variations in the North Atlantic, as well as the storminess and extreme events along the French Basque coastal region.</p

    Isolation and Purification of a Novel Deca-Antifungal Peptide from Potato (Solanum tuberosum L. cv. Jopung) Against Candida albicans

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    In a previous study, an antifungal protein, AFP-J, was purified from tubers of the potato (Solanum tuberosum cv. L Jopung) and by gel filtration and HPLC. In this study, the functional peptide was characterized by partial acid digestion using HCl and HPLC. We obtained three peaks from the AFP-J, the first and third peaks were not active in the tested fungal strain. However, the second peak, which was named Potide-J, was active (MIC; 6.25 ÎŒg/mL) against Candida albicans. The amino acid sequences were analyzed by automated Edman degradation, and the amino acid sequence of Potide-J was determined to be Ala-Val-Cys-Glu-Asn-Asp-Leu-Asn-Cys-Cys. Mass spectrometry showed that its molecular mass was 1083.1 Da. Finally, we confirmed that a disulfide bond was present between Cys3 and Cys9 or Cys10. Using this structure, Potide-J was synthesized via solid-phase methods. In these experiments, only the linear sequence was shown to display strong activity against Candida albicans. These results suggest that Potide-J may be an excellent candidate compound for the development of commercially applicable antibiotic agents

    Crystallization and preliminary X-ray crystallographic studies on a Kunitz-type potato serine protease inhibitor.

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    Interest in protease inhibitors has been renewed because of their potent activity in preventing carcinogenesis in a wide variety of in vivo and in vitro model systems. Potato tubers contain a wide range of such protease inhibitors. In cv. Elkana potato tubers, protease inhibitors represent about 50% of the total amount of soluble protein. Potato serine protease inhibitor (PSPI), one of the isoforms of the most abundant group of protease inhibitors, is a dimeric double-headed Kunitz-type inhibitor. No high-resolution structural information on this type of inhibitor has so far been obtained, as all currently known structures are of the monomeric single-headed or monomeric double-headed types. Crystals were grown in 0.1 M HEPES pH 7.5, 10% PEG 8000 and 8% ethylene glycol complemented with 9 mM 1-s-octyl-beta-D-thioglucoside or 0.1 M glycine. Data were collected from a single crystal under cryoconditions to 1.8 Å resolution. The protein crystallized in space group P21, with unit-cell parameters a = 54.82, b = 93.92, c = 55.44 Angstrom, beta = 100.7 °; the scaling Rsym is 0.044 for 45 456 unique reflections

    Nanoindentation cracking in gallium arsenide: Part II. TEM investigation

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    The nanoindentation fracture behavior of gallium arsenide (GaAs) is examined from two perspectives in two parent papers. In the first paper (part I), we address the morphology of the crack field induced by different types of indenters by means of in situ nanoindentation inside a scanning electron microscope (SEM) and of cleavage cross-sectioning techniques. In the present paper (part II), we investigate the early stage of crack nucleation under wedge nanoindentation through cathodoluminescence and transmission electron microscopy. We find that the apex angle of the wedge indenter influences the dislocation microstructure and, as a consequence, the mechanism of crack nucleation under nanoindentation. The formation of microtwins depends on both the orientation of the indenter with respect to the orientation of the GaAs crystal and on the apex angle of the indenter. For dicing applications of GaAs wafers, it is desirable to have an opening angle of the indenter smaller than 70° to facilitate the formation of precursor crack
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